Jatropha Genome Database
- JcCA0257981.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0257981.10 + phase: 2 /pseudo/partial
(426 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01032688001 assembled CDS 156 1e-38
GSVIVT01032689001 assembled CDS 155 3e-38
GSVIVT01032694001 assembled CDS 155 4e-38
GSVIVT01032687001 assembled CDS 154 8e-38
GSVIVT01032693001 assembled CDS 110 1e-24
GSVIVT01037435001 assembled CDS 96 3e-20
GSVIVT01027161001 assembled CDS 71 1e-12
GSVIVT01018560001 assembled CDS 60 3e-09
GSVIVT01022205001 assembled CDS 59 4e-09
GSVIVT01037300001 assembled CDS 55 6e-08
GSVIVT01011226001 assembled CDS 55 6e-08
GSVIVT01030579001 assembled CDS 55 7e-08
GSVIVT01008262001 assembled CDS 53 2e-07
GSVIVT01037297001 assembled CDS 53 3e-07
GSVIVT01009388001 assembled CDS 52 4e-07
GSVIVT01018832001 assembled CDS 52 4e-07
GSVIVT01016739001 assembled CDS 52 5e-07
GSVIVT01009390001 assembled CDS 51 9e-07
GSVIVT01038229001 assembled CDS 51 1e-06
GSVIVT01007878001 assembled CDS 51 1e-06
GSVIVT01015076001 assembled CDS 50 2e-06
GSVIVT01010612001 assembled CDS 49 4e-06
GSVIVT01033367001 assembled CDS 49 6e-06
>GSVIVT01032688001 assembled CDS
Length = 666
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 99/145 (68%), Gaps = 1/145 (0%)
Query: 188 YIHNQYKXXXXXXXXXXXXHYCGNVIRKMMFSKRYFGEATPDGAPGRVEIEHVDSVFAVL 247
+IHN + Y GNV+RKMMFS+RYFGE DG PG E EHV+S+F L
Sbjct: 315 HIHN-FTESSVVNVRNTVRQYTGNVVRKMMFSRRYFGEGRKDGGPGLEEEEHVNSLFTTL 373
Query: 248 KYLYSFCISDFMPFLLGLDLDGQEKFVLEANKTLRAFHNPIIDERIELWRSGQRKEMKDL 307
YLY F SD++P L DLDG EK V EA + + H+PI+DERI WR+G++KE++D+
Sbjct: 374 AYLYVFSPSDYLPCLRVFDLDGHEKMVKEALRIINKHHDPIVDERIIQWRNGEKKEVEDI 433
Query: 308 LDVFITLQDSDGKPLLTPDEIKSQV 332
LDVFIT+ D+ GKPLL+ +EIK+Q+
Sbjct: 434 LDVFITISDTKGKPLLSVEEIKAQL 458
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 65/89 (73%)
Query: 334 PERHLNEGEVVLTEHGLRFISFSTGRRGCIAALLGTCMTTMLLARMLQCFTWSLPDNVEK 393
PERH+N+ V L E LRFISFSTGRRGC LGT +T LLAR+LQCF+WS+P N ++
Sbjct: 576 PERHMNDEVVDLAEPELRFISFSTGRRGCPGTALGTALTVTLLARLLQCFSWSVPPNQDQ 635
Query: 394 IDLSEGVDELFPANPVVAFPKPRLAPHLY 422
IDL+E +++LF A P+ A KPRL +Y
Sbjct: 636 IDLTESMNDLFLAKPLHAHAKPRLHASMY 664
>GSVIVT01032689001 assembled CDS
Length = 499
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 96/143 (67%)
Query: 190 HNQYKXXXXXXXXXXXXHYCGNVIRKMMFSKRYFGEATPDGAPGRVEIEHVDSVFAVLKY 249
H+ + Y GNV+RKMMFS+RYFGE DG PG E EHV+S+F L Y
Sbjct: 149 HHNFTDSSVVNVRNAVRQYTGNVVRKMMFSRRYFGEGRKDGGPGLEEEEHVNSLFTTLVY 208
Query: 250 LYSFCISDFMPFLLGLDLDGQEKFVLEANKTLRAFHNPIIDERIELWRSGQRKEMKDLLD 309
LY F SD++P L DLDG EK V EA + H+PI+DERI WR+G++KE++D+LD
Sbjct: 209 LYVFSPSDYLPCLRVFDLDGHEKMVKEALSIINKHHDPIVDERIIQWRNGEKKEVEDILD 268
Query: 310 VFITLQDSDGKPLLTPDEIKSQV 332
VFIT+ D+ GKPLL+ +EIK+Q+
Sbjct: 269 VFITISDTKGKPLLSVEEIKAQL 291
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 65/89 (73%)
Query: 334 PERHLNEGEVVLTEHGLRFISFSTGRRGCIAALLGTCMTTMLLARMLQCFTWSLPDNVEK 393
PERH+N+ V L E LRFISFSTGRRGC LGT +T LLAR+LQCF+WS+P N ++
Sbjct: 409 PERHMNDEVVDLAEPELRFISFSTGRRGCPGTALGTALTVTLLARLLQCFSWSVPPNQDQ 468
Query: 394 IDLSEGVDELFPANPVVAFPKPRLAPHLY 422
IDL+E ++ELF A P+ A KPRL +Y
Sbjct: 469 IDLTESMNELFLAKPLHAHAKPRLPASMY 497
>GSVIVT01032694001 assembled CDS
Length = 576
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 94/126 (74%)
Query: 207 HYCGNVIRKMMFSKRYFGEATPDGAPGRVEIEHVDSVFAVLKYLYSFCISDFMPFLLGLD 266
Y GN++RKMMFS+RYFGE DG PG E EHV+S+F L YLY+F SD++P L D
Sbjct: 243 QYTGNIVRKMMFSRRYFGEGRKDGGPGLEEEEHVNSLFTSLAYLYAFSPSDYLPCLRVFD 302
Query: 267 LDGQEKFVLEANKTLRAFHNPIIDERIELWRSGQRKEMKDLLDVFITLQDSDGKPLLTPD 326
LDG EK V EA + H+PI+D+RI WR+G++KE++D+LDVFIT+ D+ GKPLL+ +
Sbjct: 303 LDGHEKMVKEALSIISKHHDPIVDDRIIQWRNGEKKEVEDILDVFITISDTKGKPLLSVE 362
Query: 327 EIKSQV 332
EIK+Q+
Sbjct: 363 EIKAQL 368
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 62/89 (69%)
Query: 334 PERHLNEGEVVLTEHGLRFISFSTGRRGCIAALLGTCMTTMLLARMLQCFTWSLPDNVEK 393
PERH+N+ V L E LRFISFSTGRRGC LGT +T LLAR+LQCF+WS+P N +
Sbjct: 486 PERHMNDEVVDLAESELRFISFSTGRRGCPGTALGTALTVTLLARLLQCFSWSVPPNQNQ 545
Query: 394 IDLSEGVDELFPANPVVAFPKPRLAPHLY 422
IDL E ++ELF A P+ A KPR +Y
Sbjct: 546 IDLKESMNELFLAKPLHAHAKPRFHASMY 574
>GSVIVT01032687001 assembled CDS
Length = 484
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 94/126 (74%)
Query: 207 HYCGNVIRKMMFSKRYFGEATPDGAPGRVEIEHVDSVFAVLKYLYSFCISDFMPFLLGLD 266
Y GNV+RKMMFS+RYFGE DG PG E EHV+S+F +L YLYSF SD++P L D
Sbjct: 151 QYTGNVVRKMMFSRRYFGEGRKDGGPGLEEEEHVNSLFTLLAYLYSFSPSDYLPCLRVFD 210
Query: 267 LDGQEKFVLEANKTLRAFHNPIIDERIELWRSGQRKEMKDLLDVFITLQDSDGKPLLTPD 326
LDG E V +A + H+PI+DERI WR+G++KE++D+LDVF+T+ D+ GKPLL+ +
Sbjct: 211 LDGHETMVKDALSIINKHHDPIVDERIIQWRNGEKKEVEDILDVFLTISDTKGKPLLSVE 270
Query: 327 EIKSQV 332
EIK+Q+
Sbjct: 271 EIKAQL 276
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 66/89 (74%)
Query: 334 PERHLNEGEVVLTEHGLRFISFSTGRRGCIAALLGTCMTTMLLARMLQCFTWSLPDNVEK 393
PERH+N+ V L EH LRFISFSTGRRGC LGT +T LLAR+LQCF+WS+P N ++
Sbjct: 394 PERHMNDEVVDLAEHELRFISFSTGRRGCPGTALGTALTVTLLARLLQCFSWSVPPNQDQ 453
Query: 394 IDLSEGVDELFPANPVVAFPKPRLAPHLY 422
IDL+E ++ELF A P+ A KPRL +Y
Sbjct: 454 IDLTESMNELFLAKPLHAHAKPRLPASMY 482
>GSVIVT01032693001 assembled CDS
Length = 247
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 65/89 (73%)
Query: 334 PERHLNEGEVVLTEHGLRFISFSTGRRGCIAALLGTCMTTMLLARMLQCFTWSLPDNVEK 393
PERH+N+ V L E LRFISFSTGRRGC LGT +T LLAR+LQCF+WS+P N ++
Sbjct: 157 PERHMNDEVVDLAEPELRFISFSTGRRGCPGTALGTALTVTLLARLLQCFSWSVPPNQDQ 216
Query: 394 IDLSEGVDELFPANPVVAFPKPRLAPHLY 422
IDL+E ++ELF A P+ A KPRL +Y
Sbjct: 217 IDLTESMNELFLAKPLHAHAKPRLPASMY 245
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 34/37 (91%)
Query: 296 WRSGQRKEMKDLLDVFITLQDSDGKPLLTPDEIKSQV 332
WR+G++KE++D LDVF+T++D+ GKPLL+ +EIK+Q+
Sbjct: 3 WRNGEKKEVEDTLDVFLTIRDTKGKPLLSVEEIKAQL 39
>GSVIVT01037435001 assembled CDS
Length = 429
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 334 PERHLNEGE---VVLTEHGLRFISFSTGRRGCIAALLGTCMTTMLLARMLQCFTWSLPDN 390
PERHL+EG V LTE LRFISF TGRRGC G+ MT MLLAR+LQ FTWS P
Sbjct: 333 PERHLSEGTGKMVELTEPDLRFISFGTGRRGCPGKATGSAMTVMLLARLLQGFTWSAPPE 392
Query: 391 VEKIDLSEGVDELFPANPVVAFPKPRLAPHLYPTS 425
++IDLSE ++L P+ A KPRL LY +
Sbjct: 393 QKEIDLSESRNDLSLEKPLHAVAKPRLHASLYSAA 427
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 155 RKXEKILTSEIISPAKHKWLHDKRTEEADNLVFYIHNQYK 194
+K +++ S++I+ KWLHDKR EEADNLV +I+NQ K
Sbjct: 150 KKMRRVVASDVINETTFKWLHDKRVEEADNLVRFIYNQCK 189
>GSVIVT01027161001 assembled CDS
Length = 527
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 310 VFITLQDSDGKPLLTPDEIKSQVAPERHL-NEGEVVLTEHGLRF--ISFSTGRRGCIAAL 366
VFI L PD + PERH +G V HG F + FS G+R C A
Sbjct: 410 VFINTHGLGRNTSLWPD--VEEFRPERHWPADGSRVEISHGADFKILPFSAGKRKCPGAP 467
Query: 367 LGTCMTTMLLARMLQCFTWSLPDNV--EKIDLSEGVDELFP-ANPVVAFPKPRLAPHLY 422
LG + M LAR+L CF W+ PD + E ID E P A P++A PRLA H+Y
Sbjct: 468 LGVTLVLMALARLLHCFDWAPPDGLRPEDIDTREVYGMTMPKAQPLMAIASPRLAAHMY 526
>GSVIVT01018560001 assembled CDS
Length = 568
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 330 SQVAPERHLNEG-EVVLTEHGLRFISFSTGRRGCIAALLGTCMTTMLLARMLQCFTWSLP 388
S+ PER L+ + + + R++ F +GRR C L + +LA ML F W LP
Sbjct: 472 SEFQPERFLSGSLKCDYSGNDFRYLPFGSGRRICAGVPLAERIVPHILASMLHLFDWRLP 531
Query: 389 DNVEKIDLSEGVD-ELFPANPVVAFPKPRLA 418
D V +DL+E L A P VA PKPRL+
Sbjct: 532 DGVNGVDLTEKFGLVLRKATPFVAIPKPRLS 562
>GSVIVT01022205001 assembled CDS
Length = 608
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 334 PERHLNEGEVVLTEHGLRFISFSTGRRGCIAALLGTCMTTMLLARMLQCFTWSLPDNV-- 391
PER + E ++ +FI F +GRRGC LG + ++LA+++ CF W LPDN+
Sbjct: 521 PERFM-ESDIDFRGQHFQFIPFGSGRRGCPGMQLGLTVVRLVLAQLVHCFDWELPDNMLP 579
Query: 392 EKIDLSEGVDELFP-ANPVVAFPKPRL 417
++D++E P A +VA P RL
Sbjct: 580 SELDMTEEFGLTLPRAKHLVAIPTCRL 606
>GSVIVT01037300001 assembled CDS
Length = 264
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 32/40 (80%)
Query: 155 RKXEKILTSEIISPAKHKWLHDKRTEEADNLVFYIHNQYK 194
+K ++L S++I+P+ +WLHDKR EEADNLV Y++NQ K
Sbjct: 174 KKMRRVLASKVINPSTFRWLHDKRVEEADNLVRYVYNQCK 213
>GSVIVT01011226001 assembled CDS
Length = 247
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 32/40 (80%)
Query: 155 RKXEKILTSEIISPAKHKWLHDKRTEEADNLVFYIHNQYK 194
+K ++L S++I+P+ +WLHDKR EEADNLV Y++NQ K
Sbjct: 158 KKMRRVLASKVINPSTFRWLHDKRVEEADNLVRYVYNQCK 197
>GSVIVT01030579001 assembled CDS
Length = 509
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 307 LLDVFITLQDSDGKPLLTPDEIKSQVAPERHL-NEGEVVL---TE---HGLRFISFSTGR 359
++ F +QD + E S+ PER L N GE ++ TE R++ F +GR
Sbjct: 385 MISAFAIMQDPNSW------EDPSEFIPERFLVNSGENMVDHVTEIKGQDFRYVPFGSGR 438
Query: 360 RGCIAALLGTCMTTMLLARMLQCFTWSLPDNVEKIDLSEG 399
RGC A L + M + R++QCF W + D EK+DL+ G
Sbjct: 439 RGCPGAALAMMVMQMTIGRLVQCFDWRVKDG-EKVDLNVG 477
>GSVIVT01008262001 assembled CDS
Length = 1049
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 334 PERHLNEGEVVLTEHGLRFISFSTGRRGCIAALLGTCMTTMLLARMLQCFTWSLPDNV-- 391
PER +N + L I F +GRRGC LG ++LA++L CF W LP+++
Sbjct: 920 PERFINS-NIDLQGRDFELIPFGSGRRGCPGIQLGLRTVRLVLAQLLHCFNWELPNDMSS 978
Query: 392 EKIDLSEGVDELFPANPV 409
+ +D+SE P N V
Sbjct: 979 DDLDMSEKFGLTMPRNGV 996
>GSVIVT01037297001 assembled CDS
Length = 325
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 155 RKXEKILTSEIISPAKHKWLHDKRTEEADNLVFYIHNQYK 194
+K ++L S +I+P+ +WLHDKR EE DNLV Y++NQ K
Sbjct: 235 KKMRRVLASNVINPSTFRWLHDKRVEETDNLVRYVYNQCK 274
>GSVIVT01009388001 assembled CDS
Length = 476
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 349 GLRFISFSTGRRGCIAALLGTCMTTMLLARMLQCFTWSLPDNVEKIDLSEGVDELFP-AN 407
GLRF+ F +GRRGC L M + + ++QCF W D + +D++EG P A
Sbjct: 399 GLRFLPFGSGRRGCPGEGLAIRMVGLAMGSLIQCFDWERVDQ-QMVDMTEGHGLSIPKAQ 457
Query: 408 PVVAFPKPR 416
P++A +PR
Sbjct: 458 PLLAKCRPR 466
>GSVIVT01018832001 assembled CDS
Length = 409
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 334 PERHLNEGEVVLTEHGLRFISFSTGRRGCIAALLGTCMTTMLLARMLQCFTWSLPDNVEK 393
P R L G FI F +GRR C LG + + +L CFTW LPD ++
Sbjct: 318 PSRFLKAGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALELAVVHLLHCFTWELPDGMKP 377
Query: 394 IDLSEGVDELFP-----ANPVVAFPKPRL 417
+L G ++F A +VA P PRL
Sbjct: 378 SELDMG--DVFGLTAPRATRLVAVPSPRL 404
>GSVIVT01016739001 assembled CDS
Length = 477
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 321 PLLTPDEIKSQVAPERHLNEGEVVLTEHGLRFISFSTGRRGCIAALLGTCMTTMLLARML 380
P+L D+ ++ PER + + + + + F TGRR C LG + LA +L
Sbjct: 373 PMLIWDQ-PNEFIPERFIGKN-IDVKGQDFELLPFGTGRRMCPGYSLGLKVIQSSLANLL 430
Query: 381 QCFTWSLPDNVEKIDLSEGVDELFPAN-----PVVAFPKPRLAPHLY 422
F W LP +++ DLS ++E+F + P+VA +PRL HLY
Sbjct: 431 HGFKWKLPGDMKPGDLS--MEEIFGLSTPKKIPLVAMAEPRLPAHLY 475
>GSVIVT01009390001 assembled CDS
Length = 445
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 313 TLQDSDGKPLLTPDEIKSQVAPER-HLNEGEVVLT--------EHGLRFISFSTGRRGCI 363
TL+ PLL P E + + + +G ++L G +F+ F +GRRGC
Sbjct: 323 TLRMYPAGPLLVPHESSKECSVGGFRIPQGTMLLVNLWAIQRDRDGFKFVPFGSGRRGCP 382
Query: 364 AALLGTCMTTMLLARMLQCFTWSLPDNVEKIDLSEGVDELFP-ANPVVAFPKPR 416
L + + L ++QCF W D + +D++EG P A P++A +PR
Sbjct: 383 GEALAIRIVGLALGSLIQCFDWERVDE-QMVDMTEGGGLTLPKAQPLLAKCRPR 435
>GSVIVT01038229001 assembled CDS
Length = 389
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 330 SQVAPERHLNE-GEVVLTEHGLRFISFSTGRRGCIAALLGTCMTTMLLARMLQCFTWSLP 388
S+ PER L+E G T + +++ F +GRR C L M LLA +L F W LP
Sbjct: 160 SEFKPERFLSEPGRWDYTGNNFQYLPFGSGRRICAGIPLAERMIIYLLASLLHSFNWQLP 219
Query: 389 DNVEKIDLSEGVDELFPA-NPVVAFPKPRLAP 419
+ E +DLSE + P++AF + + P
Sbjct: 220 EG-EDLDLSEKFGIVLKKRTPLIAFIQALVVP 250
>GSVIVT01007878001 assembled CDS
Length = 451
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 353 ISFSTGRRGCIAALLGTCMTTMLLARMLQCFTWSLPDN--VEKIDLSEGVD-ELFPANPV 409
I F GRR C LG M +L A ++ F W LP+ EK+++ E L A P+
Sbjct: 314 IPFGAGRRICAGMSLGLRMVHLLTATLVHAFNWELPEGQVAEKLNMDEAYGLTLQRAAPL 373
Query: 410 VAFPKPRLAPHLY 422
+ P+PRL+P ++
Sbjct: 374 MVHPRPRLSPQVF 386
>GSVIVT01015076001 assembled CDS
Length = 398
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 324 TPDEIKSQVAPERHLNEGEVVLTEHGLRFISFSTGRRGCIAALLGTCMTTMLLARMLQCF 383
P+E + PER L + + + + F +GRR C+ LG M L+ ML F
Sbjct: 302 APEEFR----PERFLGKA-IDVNGQNFELLPFGSGRRMCVGYRLGLKMIQSSLSNMLHGF 356
Query: 384 TWSLPDNVEKIDLSEGVDELFPAN-----PVVAFPKPRLAPHLY 422
W LP +++ +L+ ++E+F P+VA +PRL HLY
Sbjct: 357 HWKLPGDMKTEELN--MEEVFGLTTPRKVPLVAVMEPRLPSHLY 398
>GSVIVT01010612001 assembled CDS
Length = 1538
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 333 APERHLNEGEVVLTEHGLRFISFSTGRRGCIAALLGTCMTTMLLARMLQCFTWSLPDNVE 392
PER L + ++ + +I F GRR C LG ++LA ++ F WSLPDN++
Sbjct: 1452 TPERFL-DSKLEFKGNDFEYIPFGAGRRICPGMALGARQVPLVLATLVHLFDWSLPDNMD 1510
Query: 393 --KIDLSEG-VDELFPANPVVAFPKPR 416
+ID+ E V L NP+ PK R
Sbjct: 1511 SAQIDMEEWLVITLRKENPLRLVPKVR 1537
>GSVIVT01033367001 assembled CDS
Length = 382
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 334 PERHLNEGEV--VLTEHGLRF--ISFSTGRRGCIAALLGTCMTTMLLARMLQCFTWSLPD 389
PER LNEG + L G +F + F +GRR C L + +A ++QCF W +
Sbjct: 291 PERFLNEGGINRRLNVRGQQFHLLPFGSGRRLCPGTTLALQVLHTTIAALIQCFDWKVNG 350
Query: 390 NVEKIDLSEGVDELFPANPVVAFPKPRLAP 419
N ID+ EG A P+V P RL P
Sbjct: 351 N---IDMKEGFGST-RATPLVCVPVVRLNP 376