Jatropha Genome Database
- JcCA0257171.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0257171.20 - phase: 0 /pseudo/partial
(239 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01010308001 assembled CDS 210 6e-55
GSVIVT01038631001 assembled CDS 110 7e-25
GSVIVT01017322001 assembled CDS 74 7e-14
GSVIVT01018654001 assembled CDS 61 5e-10
GSVIVT01016418001 assembled CDS 60 1e-09
GSVIVT01016412001 assembled CDS 59 2e-09
GSVIVT01023134001 assembled CDS 59 3e-09
GSVIVT01013665001 assembled CDS 53 1e-07
GSVIVT01001315001 assembled CDS 53 1e-07
GSVIVT01013663001 assembled CDS 52 2e-07
GSVIVT01016572001 assembled CDS 51 4e-07
GSVIVT01016403001 assembled CDS 50 1e-06
GSVIVT01001316001 assembled CDS 48 4e-06
GSVIVT01016428001 assembled CDS 47 9e-06
>GSVIVT01010308001 assembled CDS
Length = 182
Score = 210 bits (534), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 131/194 (67%), Gaps = 19/194 (9%)
Query: 52 AAENRDNLYHLRKAXXXXXXXXXXXXXXXAP-VAPVGLWDRFPTARTVQQXXXXXXXXXX 110
A E RDNL HLR+A AP VAP+GLWDRFPTARTVQQ
Sbjct: 2 ATEGRDNLDHLRRAGKHNPQKKR------APQVAPIGLWDRFPTARTVQQMMETMERMME 55
Query: 111 DPFAYTATWPSEPPSPVERSGYSRGRTPWEIKEGETEYKMRFDMPGMTKEDVKAEKVPEK 170
DP AY+ WPSE GYSRGRTPWEIKE E EYK+RFDMPGMTK+DVK V EK
Sbjct: 56 DPLAYSGGWPSE------SGGYSRGRTPWEIKEDEGEYKIRFDMPGMTKDDVKLW-VEEK 108
Query: 171 NNVNGAQN-----GIEEEEEGGWSAKSYGKYSCRIALPENIQFEKIKAEVKDGVLYITIP 225
V A+ G EE+EG WSAKSYG+Y+ R+ALPEN+QFEKIKAEVKDGVLYITIP
Sbjct: 109 MLVIKAEKMSGTEGNGEEDEGAWSAKSYGRYNSRVALPENVQFEKIKAEVKDGVLYITIP 168
Query: 226 KASTTGKILDINVQ 239
KAS KILDINV+
Sbjct: 169 KASDNPKILDINVE 182
>GSVIVT01038631001 assembled CDS
Length = 227
Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 86/157 (54%), Gaps = 15/157 (9%)
Query: 83 VAPVGLWDRFPTARTVQQXXXXXXXXXXDPFAYTATWPSEPPSPVERSGYSRGRTPWEIK 142
++P GL D F RT++Q F T +P G + R+PW+I
Sbjct: 86 ISPFGLLDPFSPMRTMRQMMDAMDRM----FEETVAFP----------GSAEVRSPWDIV 131
Query: 143 EGETEYKMRFDMPGMTKEDVKAEKVPEKNNVNGAQNGIEEEEEGGWSAKSYGKYSCRIAL 202
+ E E KMRFDMPG++KEDVK + + G Q EE E+ WS + YS R+ L
Sbjct: 132 DDENEIKMRFDMPGLSKEDVKVSVEDDLLVIKGEQKK-EEGEKDSWSGSGFSSYSTRLQL 190
Query: 203 PENIQFEKIKAEVKDGVLYITIPKASTTGKILDINVQ 239
P+N + +KIKAE+K+GVL I+IPK K++D+ +Q
Sbjct: 191 PDNCEKDKIKAELKNGVLSISIPKTKVERKVIDVQIQ 227
>GSVIVT01017322001 assembled CDS
Length = 233
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 9/105 (8%)
Query: 141 IKEGETEYKMRFDMPGMTKEDVKAEKVPEKNNVNGAQN-----GIEEEEEGGWSAKSYGK 195
+KE + YK+R++MPG+TKEDVK ++ G G ++E WSA SYG
Sbjct: 132 LKEQDQCYKLRYEMPGLTKEDVKISVEDGILSIRGEHKEEEEEGSDDEH---WSATSYGY 188
Query: 196 YSCRIALPENIQFEKIKAEVKDGVLYITIPKASTTGK-ILDINVQ 239
Y + LP + + E+IKAE+KDGVL I IP+ GK + ++ +Q
Sbjct: 189 YDTSLLLPTDAKIEEIKAELKDGVLTIIIPRNEKKGKDVKEVQIQ 233
>GSVIVT01018654001 assembled CDS
Length = 208
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 20/161 (12%)
Query: 81 APVAPVGLWDRFPTARTVQQXXXXXXXXXXDPFAYTATWPSEPPSPVERSGYSRG-RTPW 139
AP + ++D F R++ Q +PF T+ G G R W
Sbjct: 64 APSSFSDVFDPFSPTRSLSQVLNLMDHFMDNPFLSTS------------RGMGTGIRRSW 111
Query: 140 EIKEGETEYKMRFDMPGMTKEDVKAEKVPEKNNVNGAQNGIEEEEEGGWSAKSYGKYSCR 199
++KE + +R DMPG++KEDV KV + N Q + E E S + +YS R
Sbjct: 112 DVKETDDALHLRVDMPGLSKEDV---KVSVEQNTLTIQGEEKNETEDEESRR---RYSSR 165
Query: 200 IALPENI-QFEKIKAEVKDGVLYITIPKASTTGKILDINVQ 239
I LPE + + +IKAE+ GVL I +PK + INV+
Sbjct: 166 IDLPEKLYKTGEIKAEMNKGVLKIVVPKLKEEERTDVINVK 206
>GSVIVT01016418001 assembled CDS
Length = 113
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 26/116 (22%)
Query: 113 FAYTATWPSEPPSPVERSGYSRGRTPWEIKEGETEYKMRFDMPGMTKEDVKAEKVPEKNN 172
F + AT + P + E S ++ R W KE + + D+PG+ KE+VK E
Sbjct: 7 FPFNATLSNIPSTVGETSAFTNTRVDW--KETLVAHVFKADLPGLKKEEVKVE------- 57
Query: 173 VNGAQNGIEEEEEGGWSA--KSYGKYSCRIALPENIQFEKIKAEVKDGVLYITIPK 226
W +S GK+ CR LPE+ + +++KA +++GVL +TIPK
Sbjct: 58 ---------------WHHVDRSSGKFLCRFRLPEDAKTDEVKASIENGVLTMTIPK 98
>GSVIVT01016412001 assembled CDS
Length = 155
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 26/116 (22%)
Query: 113 FAYTATWPSEPPSPVERSGYSRGRTPWEIKEGETEYKMRFDMPGMTKEDVKAEKVPEKNN 172
F + AT + P + E S ++ R W KE + + D+PG+ KE+VK E
Sbjct: 49 FPFNATLSNIPSTVGETSAFANTRVDW--KETLVAHVFKADLPGLKKEEVKVE------- 99
Query: 173 VNGAQNGIEEEEEGGWS--AKSYGKYSCRIALPENIQFEKIKAEVKDGVLYITIPK 226
W +S GK+ CR LPE+ + +++KA +++GVL +TIPK
Sbjct: 100 ---------------WHRMDRSSGKFLCRFRLPEDAKTDEVKASIENGVLTMTIPK 140
>GSVIVT01023134001 assembled CDS
Length = 284
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 111 DPFAYTATWPSEPPSPVERSGYSRGRTPWEIKEGETEYKMRFDMPGMTKEDVKAEKVPEK 170
DPF P P +E + R+ W KE + + + D+PGM KED+K E E+
Sbjct: 111 DPFRILEHSPITVPKGLE--TIALARSDW--KETISAHIITLDVPGMKKEDIKIEI--EE 164
Query: 171 NNV---NGAQNGIEEEEEGGW--SAKSYGKYSCRIALPENIQFEKIKAEVKDGVLYITIP 225
N V +G + E E W S ++ GK+ + LP N ++IKA +++GVL ITIP
Sbjct: 165 NRVLRISGERTAEGEAEGEKWHRSERATGKFWRQFRLPANADLDRIKAHLENGVLRITIP 224
Query: 226 KAS 228
K +
Sbjct: 225 KLA 227
>GSVIVT01013665001 assembled CDS
Length = 159
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 28/155 (18%)
Query: 81 APVAPVGLWDRFPTARTVQQXXXXXXXXXXDPFAYTATWPSEPPSPVERSGYSRGRTPWE 140
P++P WD F F +W P V S + W
Sbjct: 16 TPLSPSDAWDPFDFG-----------------FGVEKSWGRGPDDDV--SALAHAHVDW- 55
Query: 141 IKEGETEYKMRFDMPGMTKEDVKAEKVPEKNNV---NGAQNGIEEEEEGGWS--AKSYGK 195
+E + + R D+PG+ +E++K + E NN+ +G + +EE + W + G
Sbjct: 56 -RETDNAHVFRADLPGVRREELKVQV--EDNNILKISGEKTKEKEEVDDQWHRVERQRGS 112
Query: 196 YSCRIALPENIQFEKIKAEVKDGVLYITIPKASTT 230
+ R LPEN ++I + +KDGVL +T+PK + +
Sbjct: 113 FLRRFRLPENAITDRISSALKDGVLTVTVPKKTES 147
>GSVIVT01001315001 assembled CDS
Length = 201
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 23/122 (18%)
Query: 111 DPFAYTAT----------WPSEPPSPVERSGYSRGRTPWEIKEGETEYKMRFDMPGMTKE 160
DPF+ T + + P R + R W++KE + +R DMPG+ KE
Sbjct: 66 DPFSRTRSLSQVLNLMDQFMENPLVAASRGMGAVSRRGWDVKEEKDALFVRMDMPGLGKE 125
Query: 161 DVKAEKVPEKNNVNGAQNGIEEEEEGG---WSAKSYGKYSCRIALPENI-QFEKIKAEVK 216
DVK V+ QN + + EGG + ++ KY+ RI LP N+ +F++IKAE+K
Sbjct: 126 DVK---------VSVEQNTLIIKGEGGKELENDETGRKYTSRIDLPANLYKFDEIKAEMK 176
Query: 217 DG 218
+G
Sbjct: 177 NG 178
>GSVIVT01013663001 assembled CDS
Length = 163
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 10/104 (9%)
Query: 142 KEGETEYKMRFDMPGMTKEDVKAEKVPEKNNVNGAQNGIEEEEEGG--WS--AKSYGKYS 197
+E + + +R D+PG+ KEDVK + V + N + + +E+EE G W + G +
Sbjct: 60 RETDNAHTIRADLPGVRKEDVKVQ-VEDGNILQISGEKTKEKEESGERWHRIERQRGSFL 118
Query: 198 CRIALPENIQFEKIKAEVKDGVLYITIPK--ASTTG---KILDI 236
R LPEN E I +++GVL +T+PK A++TG K +DI
Sbjct: 119 RRFRLPENANTEGINCALENGVLTVTVPKKEATSTGSDVKQIDI 162
>GSVIVT01016572001 assembled CDS
Length = 113
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 21/107 (19%)
Query: 148 YKMRFDMPGMTKEDVKAEKVPEKNNV-------NGAQNGIEEE------EEGGWSAKSYG 194
+ +FD+PG++K+D+K E E NV G + + ++ E GG G
Sbjct: 10 HIFKFDVPGLSKDDIKVE--IEDGNVLRVYRVAGGREESVVKDTVWHIAERGG----GRG 63
Query: 195 KYSCRIALPENIQFEKIKAEVKDGVLYITIPKAST--TGKILDINVQ 239
++S LPEN++ ++IKA+V++GVL I +PK ++ K+ IN+
Sbjct: 64 EFSREFELPENVKVDQIKAQVENGVLTIVVPKDTSPKASKVKTINIS 110
>GSVIVT01016403001 assembled CDS
Length = 136
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 23/114 (20%)
Query: 113 FAYTATWPSEPPSPVERSGYSRGRTPWEIKEGETEYKMRFDMPGMTKEDVKAEKVPEKNN 172
F +T + PPS E S ++ R W KE + + D+PG+ KE EK+
Sbjct: 31 FPFTTPLANVPPSTRETSAFTNARIDW--KETPEAHVFKADLPGLKKE--------EKDK 80
Query: 173 VNGAQNGIEEEEEGGWSAKSYGKYSCRIALPENIQFEKIKAEVKDGVLYITIPK 226
+ + +S GK+ R LPEN + ++ +A +++GVL +T+PK
Sbjct: 81 WHRVE-------------RSSGKFLRRFRLPENAKMDEAEASLENGVLTVTVPK 121
>GSVIVT01001316001 assembled CDS
Length = 201
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 136 RTPWEIKEGETEYKMRFDMPGMTKEDVKAEKVPEKNNVNGAQNGIEEEEEGGW-SAKSYG 194
R W++KE + +R DMPG+ KEDVK E+N + I+ EE W + +
Sbjct: 101 RRGWDVKEEKDALFVRMDMPGLGKEDVKVS--VEQNTLT-----IKGEEGEKWENDECRR 153
Query: 195 KYSCRIALPENI-QFEKIKAEVKDG 218
KY+ RI LP + +F++IKA++K+G
Sbjct: 154 KYTSRIDLPAKMYKFDEIKADMKNG 178
>GSVIVT01016428001 assembled CDS
Length = 118
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 26/98 (26%)
Query: 132 YSRGRTPWEIKEGETEYKMRFDMPGMTKEDVKAEKVPEKNNVNGAQNGIEEEEEGGWS-- 189
+ R W KE + + D+PG+ KE+VK E W
Sbjct: 31 FDLTRIDW--KETPEAHVFKADLPGVKKEEVKVE----------------------WHRV 66
Query: 190 AKSYGKYSCRIALPENIQFEKIKAEVKDGVLYITIPKA 227
+S GK+ R LPEN++ +++KA +++GVL +T+PKA
Sbjct: 67 ERSSGKFMRRFRLPENVKVDEVKAAMENGVLTVTVPKA 104