Jatropha Genome Database

JcCA0231431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0231431.10 - phase: 0 /TE/partial
         (858 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01012382001 assembled CDS                                       204   1e-52
GSVIVT01031724001 assembled CDS                                       190   2e-48
GSVIVT01000641001 assembled CDS                                       186   3e-47
GSVIVT01028343001 assembled CDS                                       155   6e-38
GSVIVT01013655001 assembled CDS                                       140   2e-33
GSVIVT01013341001 assembled CDS                                       122   1e-27
GSVIVT01009548001 assembled CDS                                       108   9e-24
GSVIVT01010555001 assembled CDS                                        91   2e-18
GSVIVT01015960001 assembled CDS                                        90   5e-18
GSVIVT01018138001 assembled CDS                                        73   8e-13
GSVIVT01011334001 assembled CDS                                        68   2e-11
GSVIVT01024357001 assembled CDS                                        61   3e-09
GSVIVT01026124001 assembled CDS                                        55   2e-07

>GSVIVT01012382001 assembled CDS
          Length = 952

 Score =  204 bits (520), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 96/193 (49%), Positives = 129/193 (66%)

Query: 615 VNFVSQFMHDPTVIHMKFVHRILRYVKGTLDHGLHFTSNSTLTLQGFADADWAGCPITRR 674
           V+ VSQ+MH PTV+H+  V RILRY+K T+  G+    N    + GF+D+DWAG  I RR
Sbjct: 751 VSLVSQYMHAPTVVHLCMVKRILRYLKKTIGRGIVMRRNGHTDIIGFSDSDWAGNTIDRR 810

Query: 675 STTGYCTFLGSNLISWCAKKQHTVSRSSTEAEYRAMAHTTAELTWLTYLLKEFSIPITVP 734
           STTGYC F+G NL+SW +KKQ  V+RSS EAEYRAMA  + E+ WL  LL +     T P
Sbjct: 811 STTGYCMFVGGNLVSWKSKKQPVVARSSAEAEYRAMAAASCEMVWLKNLLTDLGFSPTSP 870

Query: 735 PILFCDNLSALYLTINPVFHARSKHIELDYHFVRERVAQGLLVTKYIPTTQQVADIFTKP 794
             LFCDN +A+++  NPVFH R+KHIE+D HF+R++V   ++ T YI ++ Q+AD FTK 
Sbjct: 871 MKLFCDNQAAMHIAANPVFHERTKHIEVDCHFIRQQVQSKVIQTHYIRSSDQLADAFTKV 930

Query: 795 IHKSALANFRSKL 807
           +  +       KL
Sbjct: 931 LSSTVFHRLMFKL 943


>GSVIVT01031724001 assembled CDS
          Length = 1135

 Score =  190 bits (483), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 95/185 (51%), Positives = 126/185 (68%), Gaps = 2/185 (1%)

Query: 556  YALTLLDRFGMIDSKPMSTPSELQPPVTKAAAS--VDATLYRSIVGALQYLTLTRPDIAF 613
            Y   LL R G+ +SK +++P  +   ++ A  +   D TLYRS+VGALQY T+TRPDIA+
Sbjct: 950  YICDLLQRAGLSESKLVTSPMAVGHVLSIADGTRFEDPTLYRSLVGALQYCTITRPDIAY 1009

Query: 614  SVNFVSQFMHDPTVIHMKFVHRILRYVKGTLDHGLHFTSNSTLTLQGFADADWAGCPITR 673
            ++N   QFMH PT  H++ V R+LRY+KG+L +GL F  +S+L L  + DAD A CP  R
Sbjct: 1010 TINKFFQFMHAPTSTHLQAVKRVLRYLKGSLFYGLSFQPSSSLDLIAYTDADGASCPDDR 1069

Query: 674  RSTTGYCTFLGSNLISWCAKKQHTVSRSSTEAEYRAMAHTTAELTWLTYLLKEFSIPITV 733
            RST GYC F   NLISW A KQ  VSRSS E++YR +A+ T ELTW+  LLKE  +P+  
Sbjct: 1070 RSTNGYCIFFRGNLISWSASKQKVVSRSSIESKYRGLANATIELTWIQSLLKELFVPLFQ 1129

Query: 734  PPILF 738
            PP+LF
Sbjct: 1130 PPVLF 1134


>GSVIVT01000641001 assembled CDS
          Length = 947

 Score =  186 bits (473), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 91/220 (41%), Positives = 131/220 (59%)

Query: 585 AAASVDATLYRSIVGALQYLTLTRPDIAFSVNFVSQFMHDPTVIHMKFVHRILRYVKGTL 644
               VD+ +Y+ IVG+L YLT TRPDI  SV+ +S++M +PT +H     +I RY++GT 
Sbjct: 227 GGKKVDSIIYKQIVGSLMYLTATRPDIMHSVSLISRYMENPTELHFLAAKKICRYLQGTK 286

Query: 645 DHGLHFTSNSTLTLQGFADADWAGCPITRRSTTGYCTFLGSNLISWCAKKQHTVSRSSTE 704
           D GL +       L GF D+D+AG    RRST+GY   LG+  +SW +KKQ  V+ S+TE
Sbjct: 287 DFGLFYKKGKRSDLIGFTDSDYAGDQDNRRSTSGYVFMLGTGAVSWSSKKQPIVTLSTTE 346

Query: 705 AEYRAMAHTTAELTWLTYLLKEFSIPITVPPILFCDNLSALYLTINPVFHARSKHIELDY 764
           AE+ A      +  WL  +L+E  +       +FCDN S + L+ NPV H RSKHI++ Y
Sbjct: 347 AEFVAATVCACQAIWLRKILEELHLKQVGATTIFCDNSSTIKLSKNPVLHGRSKHIDVKY 406

Query: 765 HFVRERVAQGLLVTKYIPTTQQVADIFTKPIHKSALANFR 804
           +F+R+    G++   Y  +  QVADIFTKP+  +     R
Sbjct: 407 YFLRDLSNDGVIDLVYCRSENQVADIFTKPLKLAVFLELR 446


>GSVIVT01028343001 assembled CDS
          Length = 2295

 Score =  155 bits (393), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 68/124 (54%), Positives = 88/124 (70%)

Query: 673  RRSTTGYCTFLGSNLISWCAKKQHTVSRSSTEAEYRAMAHTTAELTWLTYLLKEFSIPIT 732
            RRST+GYC F+G NLISW +KKQ  V+RSS EAEYRAMA  T EL WL +LL+E      
Sbjct: 1467 RRSTSGYCVFIGGNLISWKSKKQDVVARSSAEAEYRAMALATCELIWLRHLLQELRFGKD 1526

Query: 733  VPPILFCDNLSALYLTINPVFHARSKHIELDYHFVRERVAQGLLVTKYIPTTQQVADIFT 792
                L CDN +AL++  NPVFH R+KHIE+D HF+RE++A G + T ++ +  Q+ADIFT
Sbjct: 1527 EQMKLICDNQAALHIASNPVFHERTKHIEVDCHFIREKIASGCVATSFVNSNDQLADIFT 1586

Query: 793  KPIH 796
            K + 
Sbjct: 1587 KSLR 1590


>GSVIVT01013655001 assembled CDS
          Length = 4396

 Score =  140 bits (353), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 66/134 (49%), Positives = 89/134 (66%)

Query: 614  SVNFVSQFMHDPTVIHMKFVHRILRYVKGTLDHGLHFTSNSTLTLQGFADADWAGCPITR 673
            ++N +SQFMH PT  H   V R+LRY+ GTLDHG+     S L L  F+D+DWAG     
Sbjct: 4254 TMNKLSQFMHQPTSDHWNAVKRLLRYLCGTLDHGITLRRTSPLALHAFSDSDWAGNKDDF 4313

Query: 674  RSTTGYCTFLGSNLISWCAKKQHTVSRSSTEAEYRAMAHTTAELTWLTYLLKEFSIPITV 733
             ST+ Y  +LG N ISW +KKQ TV+RSSTEAEYR++A T AE+ W+  LL E  + +  
Sbjct: 4314 TSTSAYIIYLGHNPISWSSKKQRTVARSSTEAEYRSVASTAAEIRWICSLLTELGVTLPQ 4373

Query: 734  PPILFCDNLSALYL 747
             P+++CDN+ A +L
Sbjct: 4374 QPVIYCDNVGATHL 4387


>GSVIVT01013341001 assembled CDS
          Length = 503

 Score =  122 bits (305), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 79/120 (65%), Gaps = 2/120 (1%)

Query: 622 MHDPTVIHMKFVHRILRYVKGTLDHGLHFTSNSTLTLQGFADADWAGCPITRRSTTGYCT 681
           MH P   HM  V++IL+Y+KGT   GLHF  +    ++ F DADWAG    RRST+GYCT
Sbjct: 1   MHSPYEAHMNVVYKILQYLKGTPRKGLHFGKHDQFKIEAFTDADWAGSIEDRRSTSGYCT 60

Query: 682 FLGSNLISWCAKKQHTVSRSSTEAEYRAMAHTTAELTWLTYLLKEFSIPITVPPILFCDN 741
           F+  NLI+W +KKQ+ V+RSS E ++R++AH   E+ W+  +L+E  + IT+ P+    N
Sbjct: 61  FVFGNLITWRSKKQNVVARSSAEVKFRSIAHGICEVLWIKRVLEE--LKITIHPLAMISN 118


>GSVIVT01009548001 assembled CDS
          Length = 849

 Score =  108 bits (271), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 113/209 (54%), Gaps = 3/209 (1%)

Query: 588 SVDATLYRSIVGALQYL-TLTRPDIAFSVNFVSQFMHDPTVIHMKFVHRILRYVKGTLDH 646
           ++ A  Y S +G+L Y     RP+I F VN + +++ +    H     +++RY++ T D 
Sbjct: 590 AMKAIPYASAIGSLMYAQACIRPNIVFIVNVLGRYLSNLGQYHWVAAKKVMRYLQRTNDF 649

Query: 647 GLHFTSNSTLTLQGFADADWAGCPITRRSTTGYCTFLGSNLISWCAKKQHTVSRSSTEAE 706
            L +     L + G++++D+ GC    +ST+GY   L    ISW + KQ  ++ S+  A+
Sbjct: 650 MLVYRRVDNLEVVGYSNSDFNGCSDDCKSTSGYIFMLTGGAISWKSVKQSLIAFSTMYAK 709

Query: 707 YRAMAHTTAELTWLTYLLKEFSIPITV--PPILFCDNLSALYLTINPVFHARSKHIELDY 764
           + A    ++++ WL  L+ E  +  ++  P +++CDN + ++ + N      SKH+E+ Y
Sbjct: 710 FVACYGASSQVVWLRKLISELQVVDSIFRPIVIYCDNNATVFYSKNNKISTSSKHMEIKY 769

Query: 765 HFVRERVAQGLLVTKYIPTTQQVADIFTK 793
             V++ V +  +V K+I T   +AD  TK
Sbjct: 770 LIVKDLVKKEDIVIKHIRTESMLADPLTK 798


>GSVIVT01010555001 assembled CDS
          Length = 147

 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 63/90 (70%), Gaps = 4/90 (4%)

Query: 415 LDVKNAFLHGHITEDLYMAQPSGM-IDSQFPNYVCKLKRALYGLKQAPRAWFDRLSRFLV 473
           +DVKNAFL+G ++E++YM  P G+ ++S   N VC L+RALYGLKQAPRAWF + S  + 
Sbjct: 1   MDVKNAFLNGDLSEEVYMQPPPGLSVES---NKVCHLRRALYGLKQAPRAWFAKFSSTIF 57

Query: 474 SYGFVCSLADPSLFIFQSSKGMIALLIYVD 503
             G+  S  D +LF+ ++ KG I LL+Y +
Sbjct: 58  RLGYTASPYDSALFLRRTDKGTILLLLYSN 87


>GSVIVT01015960001 assembled CDS
          Length = 1205

 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 55/79 (69%)

Query: 719 WLTYLLKEFSIPITVPPILFCDNLSALYLTINPVFHARSKHIELDYHFVRERVAQGLLVT 778
           W+  LL+E  +  + P  L+CDN + + +  NPV H R+KH+E+D HF++E++  GL+  
Sbjct: 2   WIRRLLEELKMTGSSPMKLYCDNKAVISVAYNPVLHDRTKHVEVDKHFIKEKIDNGLVCM 61

Query: 779 KYIPTTQQVADIFTKPIHK 797
            YIPT +QVAD+FTK +HK
Sbjct: 62  TYIPTEEQVADVFTKGLHK 80


>GSVIVT01018138001 assembled CDS
          Length = 98

 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 61/90 (67%)

Query: 467 RLSRFLVSYGFVCSLADPSLFIFQSSKGMIALLIYVDDMLLTGSSAVLLDGFVQLLCKEF 526
           +L R L+S+GFV + +D SLF+  +   +  + +YVDD+L+T S    +   +  L  +F
Sbjct: 8   KLHRALLSFGFVSTKSDQSLFLRFTPSHITYVFVYVDDILVTSSDTTAITSLIAQLNSKF 67

Query: 527 AMKDLGQLHHFLGIEVTHTSDGLLLNQFHY 556
           ++KDLG++H+FL I+V++T++GL L+Q  Y
Sbjct: 68  SLKDLGEVHYFLVIQVSYTNNGLHLSQTKY 97


>GSVIVT01011334001 assembled CDS
          Length = 640

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 1/113 (0%)

Query: 457 LKQAPRAWFDRLSRFLVSYGFVCSLADPSLFIFQSSKGMIALLI-YVDDMLLTGSSAVLL 515
           LK      FD  ++ +  +G+    +D +LF+  + KG  A++I YV D++LT      +
Sbjct: 3   LKNLLELGFDHFTKVVKGFGYSWCHSDHTLFVKHTVKGRTAIIIVYVGDIILTKDHEEEI 62

Query: 516 DGFVQLLCKEFAMKDLGQLHHFLGIEVTHTSDGLLLNQFHYALTLLDRFGMID 568
                +   EF +KDLG L +F G+E+T ++ G++++Q  Y L LL    M+D
Sbjct: 63  GKLKSIFAHEFEIKDLGNLKYFFGMEITRSNMGIVVSQCKYVLDLLTEIEMLD 115


>GSVIVT01024357001 assembled CDS
          Length = 851

 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 37/57 (64%)

Query: 307 EPRTVRQALAHPGWKHAMEEEIAALHKNETWTLVPRHTNMNVIGSKWVFKTKHKSDG 363
           EP++  +A+    W+ AME+EI  + KNETW LV +  +  +IG KW+++ K  SDG
Sbjct: 728 EPQSFEEAIKDEDWRKAMEKEIDVIEKNETWQLVEKPIDKEIIGVKWIYRVKCHSDG 784


>GSVIVT01026124001 assembled CDS
          Length = 1018

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 717 LTWLTYLLKEFSIPITVPPILFCDNLSALYLTINPVFHARSKHIELDYHFVRERVAQGLL 776
           + WL  LL E +    +  IL  D+ SA++L  N VFH++SKHI+  YHF+R  +   L+
Sbjct: 1   MIWLHGLLDELAKKQEMR-ILHSDSHSAIFLAKNSVFHSKSKHIQTKYHFIRYLIEDKLV 59

Query: 777 VTKYIPTTQQVADIFTKPI 795
           + + I  ++  AD+ TK +
Sbjct: 60  ILEKIYGSKNPADMLTKGV 78