Jatropha Genome Database
- JcCA0224581.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0224581.10 - phase: 0 /partial
(319 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01000036001 assembled CDS 417 e-117
GSVIVT01008433001 assembled CDS 278 3e-75
GSVIVT01038788001 assembled CDS 256 1e-68
GSVIVT01022368001 assembled CDS 75 3e-14
GSVIVT01020788001 assembled CDS 70 2e-12
GSVIVT01038529001 assembled CDS 67 8e-12
GSVIVT01024064001 assembled CDS 65 4e-11
GSVIVT01019284001 assembled CDS 64 1e-10
GSVIVT01019287001 assembled CDS 63 2e-10
GSVIVT01024069001 assembled CDS 60 1e-09
GSVIVT01024068001 assembled CDS 59 3e-09
GSVIVT01024070001 assembled CDS 55 5e-08
GSVIVT01024067001 assembled CDS 54 7e-08
GSVIVT01024065001 assembled CDS 51 7e-07
>GSVIVT01000036001 assembled CDS
Length = 433
Score = 417 bits (1072), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/319 (65%), Positives = 235/319 (73%), Gaps = 30/319 (9%)
Query: 1 MARNPDYGAFMEKFVLKPTNSSDELPLNGLTFAVKDIFDVDGYVTGFGNPDWARTHLAAT 60
MA+ +YGAFME+F+L+P++SS ELPLNGLTFAVKDIFDVDGYVTGFGNPDWARTH AA
Sbjct: 1 MAKASNYGAFMERFILQPSSSSHELPLNGLTFAVKDIFDVDGYVTGFGNPDWARTHQAAM 60
Query: 61 STAPAVLAILREGATCIGKTVMDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXX 120
TAP+VLA+L+ GATC+GKTVMDEMAYSINGENKHYGTP NP APD VP
Sbjct: 61 LTAPSVLAVLKGGATCVGKTVMDEMAYSINGENKHYGTPTNPQAPDRVPGGSSSGSAVAV 120
Query: 121 XXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFARNPVI 180
LVDFSLGTDTGGSVRVPASYC I G RPSHGVVST GVIP+AQSFDTVGWFAR+P I
Sbjct: 121 GAMLVDFSLGTDTGGSVRVPASYCGIFGIRPSHGVVSTTGVIPMAQSFDTVGWFARDPEI 180
Query: 181 LNHVGRVLLQLPDLDLVRPSQIIIAEDCFQLSSIPNGRVSQILVKSVEKLFGGQFSVIYE 240
LN VG VLL PD++ V+PSQIII EDCF+L SIP RV+Q+L+KSVEKLFG
Sbjct: 181 LNRVGHVLLPFPDVNPVKPSQIIIPEDCFRLLSIPIDRVTQVLIKSVEKLFG-------- 232
Query: 241 LFWNPADSLGILRNIYMFRNGPSHVVKHLTLGDYVENKVPSLKHFMSKEIKEQXYXIXXX 300
S +VKH++LGDYVE+KV SLK FMSKE + Q Y I
Sbjct: 233 ----------------------SDIVKHVSLGDYVEDKVTSLKPFMSKENQTQEYNIPSL 270
Query: 301 XXXXXXMRLLERYEFKNNH 319
MRLL+RYEFKNNH
Sbjct: 271 AALSTAMRLLQRYEFKNNH 289
>GSVIVT01008433001 assembled CDS
Length = 590
Score = 278 bits (711), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 149/318 (46%), Positives = 187/318 (58%), Gaps = 35/318 (11%)
Query: 6 DYGAFMEKFVLKPTNSSDELPL----NGLTFAVKDIFDVDGYVTGFGNPDWARTHLAATS 61
D+GAF+++ L P L+FAV D+FD++GYVTGFGNPDWARTH A+
Sbjct: 33 DFGAFVQRLQLLPPPQPAPPKAPHPLTNLSFAVSDVFDIEGYVTGFGNPDWARTHDTASR 92
Query: 62 TAPAVLAILREGATCIGKTVMDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXX 121
T+P V A++ GATC GKTV+DEMAYSINGENKHYGTP NP AP +P
Sbjct: 93 TSPVVSALVEGGATCTGKTVVDEMAYSINGENKHYGTPTNPAAPSRIPGGSSSGAAVAVA 152
Query: 122 XKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFARNPVIL 181
VDFSLG DT G VRVPA++C ++GFRPSHG VS G+I ++ S DTVGWFA++P IL
Sbjct: 153 ANFVDFSLGLDTVGGVRVPAAFCGVIGFRPSHGAVSHMGIIHVSSSLDTVGWFAKDPSIL 212
Query: 182 NHVGRVLLQLPDLDLVRPSQIIIAEDCFQLSSIPNGRVSQILVKSVEKLFGGQFSVIYEL 241
VG VLLQL P QII A+DCFQ IP RV Q+++KS EKLFG Q
Sbjct: 213 RRVGHVLLQLTYAVQRSPRQIIFADDCFQSLRIPVDRVYQVVLKSTEKLFGRQ------- 265
Query: 242 FWNPADSLGILRNIYMFRNGPSHVVKHLTLGDYVENKVPSLKHFMSKEIKEQXYXIXXXX 301
V+K L +Y+++KVPSLK F S++ +
Sbjct: 266 -----------------------VLKRENLENYLDSKVPSLKAFHSQKTNGETRN-SLIR 301
Query: 302 XXXXXMRLLERYEFKNNH 319
M L+R+EFK+NH
Sbjct: 302 SLVKIMHCLQRHEFKHNH 319
>GSVIVT01038788001 assembled CDS
Length = 607
Score = 256 bits (654), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/316 (43%), Positives = 182/316 (57%), Gaps = 35/316 (11%)
Query: 8 GAFMEKFVL----KPTNSSDELPLNGLTFAVKDIFDVDGYVTGFGNPDWARTHLAATSTA 63
GAF+E+F L +P + L L+G FAV DIFDV GYVTGFG+ W RTH AT TA
Sbjct: 52 GAFVERFELLPFPQPPPPASRLLLSGFKFAVTDIFDVKGYVTGFGSTSWKRTHEEATKTA 111
Query: 64 PAVLAILREGATCIGKTVMDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXXXK 123
AV A+L+ GATC+GKTV+DE+++ I GEN +G+P NP P +P +
Sbjct: 112 VAVTALLKNGATCVGKTVLDELSFGITGENMDFGSPANPVLPSHIPGGSSSGSAVAVASQ 171
Query: 124 LVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFARNPVILNH 183
LVDF++GTDT G VRVPAS+C ILG+RPSHG VST GV+P +QS DTVGWFAR+P IL+
Sbjct: 172 LVDFAIGTDTIGGVRVPASFCGILGYRPSHGAVSTIGVLPSSQSLDTVGWFARDPSILHR 231
Query: 184 VGRVLLQLPDLDLVRPSQIIIAEDCFQLSSIPNGRVSQILVKSVEKLFGGQFSVIYELFW 243
VG +LLQ+ ++ R ++IA+D FQLS +P + ++ K E L G +
Sbjct: 232 VGHILLQINPVEPRRVRNLMIADDLFQLSKVPKQKTVHVVNKVAENLSG----------Y 281
Query: 244 NPADSLGILRNIYMFRNGPSHVVKHLTLGDYVENKVPSLKHFMSKEIKEQXYXIXXXXXX 303
P KH+ G Y+ + VPSLK F + I + I
Sbjct: 282 QPP--------------------KHVNFGQYIASNVPSLKGFHEQSINVKN-GISALKAL 320
Query: 304 XXXMRLLERYEFKNNH 319
M L+R EFK NH
Sbjct: 321 SSVMISLQRCEFKTNH 336
>GSVIVT01022368001 assembled CDS
Length = 610
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Query: 27 LNGLTFAVKDIFDVDGYVTGFGNPDWARTHLAATSTAPAVLAILREGATCIGKTVMDEMA 86
L+G+ A+KD D Y T G W + A V + GA +GKT M E+
Sbjct: 203 LDGVPIAIKDEIDCTPYPTTGGT-TWLHKVRDCKNDACCVQRLRSCGAILVGKTNMHELG 261
Query: 87 YSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXXXKLVDFSLGTDTGGSVRVPASYCSI 146
+G N HYG NP V L +LG D GGSVR+PA+ C +
Sbjct: 262 AGTSGINPHYGATRNPYNTSKVTGGSSSGSAAVVSAGLCPAALGVDGGGSVRMPAALCGV 321
Query: 147 LGFRPSHGVVSTAGVIPLAQSFDTVGWFA 175
+GF+P+ G VS +GV+PL + VG A
Sbjct: 322 VGFKPTFGRVSHSGVLPLNWTVGMVGILA 350
>GSVIVT01020788001 assembled CDS
Length = 546
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 54/113 (47%)
Query: 63 APAVLAILREGATCIGKTVMDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXXX 122
A AV + G +GKT +DE E + NP VP
Sbjct: 149 ATAVKRVKDCGGIVVGKTNLDEFGMGSTTEGSAFQVTANPWDVSRVPGGSSGGSAAAVSA 208
Query: 123 KLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFA 175
+ SLG+DTGGSVR PAS+C ++G +P++G VS G++ A S D +G F
Sbjct: 209 RQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRFGLMAYASSLDVIGCFG 261
>GSVIVT01038529001 assembled CDS
Length = 607
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
Query: 27 LNGLTFAVKDIFDVDGYVTGFGNPDWARTHLAATSTAPAVLAILREGATCIGKTVMDEMA 86
L+G+ A+KD D + + G W A +V + G +GK M E+
Sbjct: 196 LDGIFVAIKDDIDCLPHPSK-GATIWMHEVRPVEKDAVSVSRLRSCGVIFVGKANMHELG 254
Query: 87 YSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXXXKLVDFSLGTDTGGSVRVPASYCSI 146
+G N +YGT NP AP+ L +LGTD GGSVR+P+S C +
Sbjct: 255 LGTSGNNPNYGTTRNPHAPERYTGGSSSGPAALVASGLCSAALGTDGGGSVRIPSSLCGV 314
Query: 147 LGFRPSHGVVSTAGVIPLAQSFDTVGWFA 175
+G + ++G S G I + + + +G A
Sbjct: 315 VGLKTTYGRTSMIGSICDSGTVEIIGPIA 343
>GSVIVT01024064001 assembled CDS
Length = 514
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Query: 63 APAVLAILREGATCIGKTVMDEMA--YSIN---GENKHYGTPINPCAPDCVPXXXXXXXX 117
A V+ + + GA +GK + E A S+N G + G +NP P
Sbjct: 135 AGVVMKLRKAGAIILGKASLSEWANFRSLNAPPGWSARGGQGLNPYVLSATPCGSSSGSA 194
Query: 118 XXXXXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFARN 177
LV SLGT+T GS+ PAS+ S++G +P+ G+ S AGV+P++ DT+G R
Sbjct: 195 ISVAANLVAVSLGTETDGSILCPASFNSVVGIKPTVGLTSRAGVVPVSPRQDTIGPICRT 254
>GSVIVT01019284001 assembled CDS
Length = 625
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 10 FMEKFVLKPTNSSDEL--------PLNGLTFAVKDIFDVDGYVTGFGNPDWARTHLAATS 61
+ E+ K +DE+ PL+G+ + +KDI V Y T +G+ + L +
Sbjct: 194 YTEELAYKQAKEADEMLARGIYLGPLHGIPYGLKDIISVPQYKTTWGSKTFKDQVLDIEA 253
Query: 62 TAPAVLAILREGATCIGKTVMDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXX 121
+ L GA + K +AY + G NP +
Sbjct: 254 SVYKKLK--SAGAVLVAKLATGSLAYD---DIWFGGRTRNPWNIEEYSTGSSSGPAASTS 308
Query: 122 XKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFARN 177
+V F++G++T GS+ PA+ C + RP+ G V GV+ +++S D +G F R+
Sbjct: 309 AGMVPFAIGSETCGSITYPAARCGVTALRPTFGAVGRTGVMSISESLDKIGPFCRS 364
>GSVIVT01019287001 assembled CDS
Length = 581
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 10 FMEKFVLKPTNSSDEL--------PLNGLTFAVKDIFDVDGYVTGFGNPDWARTHLAATS 61
+ E+ K +DE+ PL+G+ + +KDI V Y T +G+ + L +
Sbjct: 182 YTEELAYKQAKEADEMLARGIYLGPLHGIPYGLKDIISVPQYKTTWGSRTFKDQVLDIEA 241
Query: 62 TAPAVLAILREGATCIGKTVMDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXX 121
L GA + K +AYS + G NP
Sbjct: 242 WVYKKLK--SAGAVLVAKLATGSLAYS---DIWFGGRTRNPWNIKKYSSGSSSGSAASTS 296
Query: 122 XKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFARN 177
+V F++G++T GS+ PA+ C + RP+ G V GV+ +++S D +G F R+
Sbjct: 297 AGMVPFAIGSETCGSITSPAARCGVTALRPTFGAVGRTGVMSISESLDKIGPFCRS 352
>GSVIVT01024069001 assembled CDS
Length = 520
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 65 AVLAILRE-GATCIGKTVMDEM-----AYSINGENKHYGTPINPCAPDCVPXXXXXXXXX 118
AV+ LR+ GA +GK M E + NG G +NP P P
Sbjct: 133 AVVERLRKAGAVILGKASMSEWYQFRSLKTRNGWCPRSGQGVNPYVPSGDPCESNSGSAI 192
Query: 119 XXXXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVG 172
+V SLGT+T GS+ PA S++GF+P+ G+ S GVIP++ D+VG
Sbjct: 193 SVAANMVAVSLGTETDGSIICPADVNSVVGFKPTIGLTSRVGVIPISPRQDSVG 246
>GSVIVT01024068001 assembled CDS
Length = 988
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 8/180 (4%)
Query: 4 NPDYGAFMEKFVLKPTNSSDELPLNGLTFAVKDIFDV-DGYVTGFGNPDWARTHLAATST 62
NPD +K + + + L+G+ +KD + D T G+ +A +
Sbjct: 70 NPDAREQADKADAEIKSKKELGELHGIPVLLKDSINTKDKLNTTAGS--YALLGAEVSGD 127
Query: 63 APAVLAILREGATCIGKTVMDE-----MAYSINGENKHYGTPINPCAPDCVPXXXXXXXX 117
A V + + GA +GK M E + NG G +NP P
Sbjct: 128 AAVVERLRKAGAVILGKASMSEWYQFRSLKTRNGWCPRSGQGVNPYVASGEPCGSSSGSA 187
Query: 118 XXXXXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFARN 177
+V SLGT+T GS+ PA S++GF+P+ G+ S GVIP++ D+VG R+
Sbjct: 188 VSVAANMVAVSLGTETDGSIICPADVNSVVGFKPTVGLTSRTGVIPISPRQDSVGPICRS 247
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 82/207 (39%), Gaps = 35/207 (16%)
Query: 63 APAVLAILREGATCIGKTVMDEMAYSI-----NGENKHYGTPINPCAPDCVPXXXXXXXX 117
A V + + GA +GK + E AY +G G NP P
Sbjct: 615 AGVVRKLRKAGAIILGKASLSEWAYFRATVIPSGWCARTGQGKNPYVLSATPCGSSSGSA 674
Query: 118 XXXXXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFARN 177
L SLGT+T GS+ P+ S++G +P+ G+ S AGV+P++ DTVG R
Sbjct: 675 ISVAANLAAVSLGTETDGSILCPSHVNSVVGIKPTLGLTSRAGVVPISPRQDTVGPICRT 734
Query: 178 PVILNHVGRVLLQLPDLDLVRPSQIIIAEDCFQLSS--IPNGRVSQILVKSVEKLFGGQF 235
++ VL + D ++ + SS IP G Q L + K
Sbjct: 735 ---VSDAVEVLDVIVGFDY--------RDEATRTSSKYIPQGGYKQFLNANGLK------ 777
Query: 236 SVIYELFWNPADSLGILRN-IYMFRNG 261
LGI+RN YMF NG
Sbjct: 778 ----------GKRLGIVRNPFYMFENG 794
>GSVIVT01024070001 assembled CDS
Length = 207
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 17/129 (13%)
Query: 124 LVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFARNPVILNH 183
+V SLGT+T GS+ PA + S++GF+P+ G+ S AGVIP++ D+VG + +L+
Sbjct: 1 MVAVSLGTETNGSIICPADHNSVIGFKPTVGLTSRAGVIPISPRQDSVGTVSDAVYVLDA 60
Query: 184 VGRVLLQLPDLDLVRPSQIIIAEDCFQLSSIPNGRVSQILVKSVEKLFGGQFSVI---YE 240
+ D R SQ I F IPNG Q K + L G + V+ +
Sbjct: 61 I-------VGFD-PRDSQAIEEASKF----IPNGGYKQFFNK--DGLTGKRLGVVRNPFS 106
Query: 241 LFWNPADSL 249
F+N + ++
Sbjct: 107 YFYNESTAI 115
>GSVIVT01024067001 assembled CDS
Length = 433
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Query: 63 APAVLAILREGATCIGKTVMDEMAY-----SINGENKHYGTPINPCAPDCVPXXXXXXXX 117
A V + + GA +GK + E A + +G G NP P
Sbjct: 60 AGVVRKLRKAGAIILGKASLSEWAAFRATATPSGWCARTGQGKNPYVLSATPCGSSSGSA 119
Query: 118 XXXXXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFARN 177
L SLGT+T GS+ P+ S++G +P+ G+ S AGV+P++ DTVG R
Sbjct: 120 ISVAANLAAVSLGTETDGSILCPSHINSVVGIKPTLGLTSRAGVVPISPRQDTVGPICRT 179
>GSVIVT01024065001 assembled CDS
Length = 390
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 63 APAVLAILREGATCIGKTVMDEMA----YSINGENKHYGTPINPCAPDCVPXXXXXXXXX 118
A V + + GA +GK + E G G NP P
Sbjct: 19 AGVVRKLRKAGAIILGKASLSEWTGLRFVFPYGWCARTGQGRNPYVLSATPCGSSSGSAI 78
Query: 119 XXXXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFARN 177
L SLGT+T GS+ P+ + S++G +P+ G+ S AGV+P++ DTVG R
Sbjct: 79 SVAANLAAVSLGTETMGSILCPSHFNSVVGIKPTVGLTSRAGVVPISPRQDTVGPICRT 137