Jatropha Genome Database
- JcCA0219411.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0219411.10 - phase: 0 /partial
(179 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01015062001 assembled CDS 250 2e-67
GSVIVT01016734001 assembled CDS 160 2e-40
GSVIVT01007829001 assembled CDS 72 2e-13
GSVIVT01032500001 assembled CDS 67 4e-12
GSVIVT01007828001 assembled CDS 65 2e-11
GSVIVT01007784001 assembled CDS 65 2e-11
GSVIVT01032588001 assembled CDS 61 2e-10
GSVIVT01020224001 assembled CDS 60 7e-10
GSVIVT01000602001 assembled CDS 59 9e-10
GSVIVT01020227001 assembled CDS 57 6e-09
GSVIVT01036719001 assembled CDS 55 3e-08
GSVIVT01036721001 assembled CDS 53 1e-07
GSVIVT01003951001 assembled CDS 52 1e-07
GSVIVT01036720001 assembled CDS 49 9e-07
GSVIVT01000336001 assembled CDS 49 1e-06
GSVIVT01035003001 assembled CDS 47 5e-06
>GSVIVT01015062001 assembled CDS
Length = 508
Score = 250 bits (639), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 137/179 (76%)
Query: 1 LHESIYQSVLDQLVNVYNQVKVGDPLEKGTLLGPLHTSESRKNFXXXXXXXXXXXXXXLT 60
+HESIY++VL+QL++VY QVK+GDPLEK TL+GPLHT S++NF L
Sbjct: 308 VHESIYETVLNQLIDVYKQVKMGDPLEKSTLVGPLHTRASKENFEKGIEIIKFQGGNILI 367
Query: 61 GGSIIKSEGNFVQPTIVEISPNTDVVKEELFAPVLYVMKFQTLQEAIEINNSVPQGLSSS 120
GGS ++SEGNFVQPTIVEISPN VVKEELF PVLYVMKFQT +EA+E+NNSVPQGLSSS
Sbjct: 368 GGSTVESEGNFVQPTIVEISPNASVVKEELFGPVLYVMKFQTFEEAVEMNNSVPQGLSSS 427
Query: 121 IFTRKPEIIFKWIGPQGSDCGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQYM 179
IFTRKPE+IFKWIGP GSDCGIVNVNIPTNGAEI SDSWKQYM
Sbjct: 428 IFTRKPEVIFKWIGPHGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYM 486
>GSVIVT01016734001 assembled CDS
Length = 485
Score = 160 bits (406), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 111/180 (61%), Gaps = 18/180 (10%)
Query: 1 LHESIYQSVLDQLVNVYNQVKVG--DPLEKGTLLGPLHTSESRKNFXXXXXXXXXXXXXX 58
+ E+IY+ V+++L+ Y V +G DPL+ GTLLGPLHT ++NF
Sbjct: 316 IQETIYELVIERLLLEYTLVTIGMGDPLKTGTLLGPLHTKALKRNFRTVMQKIKSQGGKV 375
Query: 59 LTGGSIIKSEGNFVQPTIVEISPNTDVVKEELFAPVLYVMKFQTLQEAIEINNSVPQGLS 118
G ++ + GNFV+PTIVEISPN DVVKEELF PVLYV+KF T +EA++INNS+ G S
Sbjct: 376 FIG-DVVSTVGNFVRPTIVEISPNADVVKEELFVPVLYVIKFTTFEEAMQINNSISPGSS 434
Query: 119 SSIFTRKPEIIFKWIGPQGSDCGIVNVNIPTNGAEIXXXXXXXXXXXXXXXXXSDSWKQY 178
+SIFTRKP ++ I G DCGIVNVN+PT G SDSW+QY
Sbjct: 435 NSIFTRKPHLVVPGIRSLGIDCGIVNVNLPTRG---------------RGGAGSDSWEQY 479
>GSVIVT01007829001 assembled CDS
Length = 503
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 1 LHESIYQSVLDQLVNVYNQVKVGDPLEKGTLLGPLHTSESRKNFXXXXXXXXXXXXXXLT 60
+HESI LD+LV +K+ DP E+G LGP+ + E + L
Sbjct: 302 VHESIAAEFLDKLVKWTKNIKISDPFEEGCRLGPVVSREQYEKILKLVSTAKSEGATILC 361
Query: 61 GGSIIK--SEGNFVQPTIV-EISPNTDVVKEELFAPVLYVMKFQTLQEAIEINNSVPQGL 117
GG + G +++PTI+ +++ + + +EE+F PVL V F + EAIE+ N GL
Sbjct: 362 GGGRPQHLKMGFYIEPTIISDVTTSMQIWREEVFGPVLCVKTFSSEDEAIELANDTQYGL 421
Query: 118 SSSIFT 123
+ ++ +
Sbjct: 422 AGAVIS 427
>GSVIVT01032500001 assembled CDS
Length = 535
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 1 LHESIYQSVLDQLVNVYNQVKVGDPLEKGTLLGPLHTSESRKNFXXXXXXXXXXXXXXLT 60
+HESIY +++ + VGDP +KG GP S+
Sbjct: 344 VHESIYDEFIEKAKARALKRVVGDPFKKGVEQGPQIDSQQFNKILGYIKSGIEAGATLEA 403
Query: 61 GGSIIKSEGNFVQPTIVE-ISPNTDVVKEELFAPVLYVMKFQTLQEAIEINNSVPQGLSS 119
GG S+G ++QPT+ + N + KEE+F PV ++KF+ L E I N+ GL++
Sbjct: 404 GGEKFSSKGYYIQPTVFSNVHDNMLIAKEEIFGPVQSILKFKDLDEVIRRANATHYGLAA 463
Query: 120 SIFTR 124
IFT+
Sbjct: 464 GIFTQ 468
>GSVIVT01007828001 assembled CDS
Length = 249
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 1 LHESIYQSVLDQLVNVYNQVKVGDPLEKGTLLGPLHTSESRKNFXXXXXXXXXXXXXXLT 60
+ ES LD+LV +K+ DPLE+G LGP+ + + L
Sbjct: 56 VQESTAAEFLDKLVKWTKNIKISDPLEEGCKLGPVVSRGQYEKLSEFISTATSEDGTVLC 115
Query: 61 GGSIIK--SEGNFVQPTIV-EISPNTDVVKEELFAPVLYVMKFQTLQEAIEINNSVPQGL 117
GG + G F++PTI+ +++ + + +EE+F PVL V T EAIE+ N L
Sbjct: 116 GGGCPQHLKRGFFIEPTIISDVTTSMQIWREEVFGPVLCVKTLSTEDEAIELANDSSYAL 175
Query: 118 SSSIFTRKPE 127
+ ++ + E
Sbjct: 176 AGAVISDDLE 185
>GSVIVT01007784001 assembled CDS
Length = 538
Score = 64.7 bits (156), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 1 LHESIYQSVLDQLVNVYNQVKVGDPLEKGTLLGPLHTSESRKNFXXXXXXXXXXXXXXLT 60
+HES+Y +++ VGDP +KG GP E
Sbjct: 347 VHESVYDEFIEKAKARALSRTVGDPFKKGIEQGPQIDPEQFAKVLRYIRSGIESNATLEC 406
Query: 61 GGSIIKSEGNFVQPTIVE-ISPNTDVVKEELFAPVLYVMKFQTLQEAIEINNSVPQGLSS 119
GG I S+G FVQPT+ + + + K+E+F PV ++K++ L E I NS GL++
Sbjct: 407 GGGRIGSKGYFVQPTVFSNVQDDMLIAKDEIFGPVQSILKYKDLDEVIRRANSTRYGLAA 466
Query: 120 SIFTR 124
+FT+
Sbjct: 467 GVFTK 471
>GSVIVT01032588001 assembled CDS
Length = 499
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 1 LHESIYQSVLDQLVNVYNQVKVGDPLEKGTLLGPLHTSESRKNFXXXXXXXXXXXXXXLT 60
+HE+I +++L+ +K+ DPLE+G LG + + + L
Sbjct: 301 VHENIAAKFVEKLIQWSKSIKISDPLEEGCRLGAIVSEGQYEKILNFISTAKSEGATILY 360
Query: 61 GGSIIK--SEGNFVQPTIV-EISPNTDVVKEELFAPVLYVMKFQTLQEAIEINNSVPQGL 117
GG + +G F++PTI+ ++S + + +EE+F PVL V F T +EA ++ N GL
Sbjct: 361 GGVRPQHLKKGFFIEPTIITDVSTSMQIWREEVFGPVLCVKTFATEEEATQLANDTHYGL 420
Query: 118 SSSIFT 123
+++ +
Sbjct: 421 GAAVVS 426
>GSVIVT01020224001 assembled CDS
Length = 538
Score = 59.7 bits (143), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 1 LHESIYQSVLDQLVNVYNQVKVGDPLEKGTLLGPLHTSESRKNFXXXXXXXXXXXXXXLT 60
+HESIY +++ + VGDP + G GP S+ + T
Sbjct: 347 VHESIYDEFVEKAKARALRRTVGDPFKAGIEQGPQIDSDQFEKILRYIRSGVENGATLET 406
Query: 61 GGSIIKSEGNFVQPTIVE-ISPNTDVVKEELFAPVLYVMKFQTLQEAIEINNSVPQGLSS 119
GG EG F++PT+ + + ++E+F PV ++KF+ L E I N+ GL++
Sbjct: 407 GGERFGKEGFFIKPTVFSNVQDGMLIAQDEIFGPVQSILKFKDLGEVIRRANATSYGLAA 466
Query: 120 SIFTR 124
+FT+
Sbjct: 467 GVFTQ 471
>GSVIVT01000602001 assembled CDS
Length = 388
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 1 LHESIYQSVLDQLVNVYNQVKVGDPLEKGTLLGPLHTSESRKNFXXXXXXXXXXXXXXLT 60
+HESIY +++ + +G+P + G GP S+ + T
Sbjct: 197 VHESIYDEFVEKAKTRALRRTIGNPFKAGIEQGPQIDSDQFEKILRYIRSGVENAGTLET 256
Query: 61 GGSIIKSEGNFVQPTIVE-ISPNTDVVKEELFAPVLYVMKFQTLQEAIEINNSVPQGLSS 119
GG +EG F++PT+ + + ++E+F PV ++KF+ L E I N+ GL++
Sbjct: 257 GGERFGNEGFFIKPTVFSNVQDGMLIAQDEIFGPVQSILKFKDLDEVIRRANAASYGLAA 316
Query: 120 SIFTR 124
+FT+
Sbjct: 317 GVFTQ 321
>GSVIVT01020227001 assembled CDS
Length = 571
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
Query: 1 LHESIYQSVLDQLVNVYNQVKVGDPLEKGTLLGPLHTSESRKNFXXXXXXXXXXXXXXLT 60
+HE IY +++ + VGDP + GT GP SE + T
Sbjct: 380 VHERIYDEFVEKAKARALKRVVGDPFKAGTEQGPQIDSEKFEKILRYIRSGVDNGATLET 439
Query: 61 GGSIIKSEGNFVQPTIVEISPNTDVVK--EELFAPVLYVMKFQTLQEAIEINNSVPQGLS 118
GG + G F++PT+ + D++K +E+F PV ++KF+ L E I N+ GL+
Sbjct: 440 GGERFGTGGYFIKPTVFS-NVQDDMLKAQDEIFGPVQSILKFKDLDEVIRRANASNCGLA 498
Query: 119 SSIFTR 124
+ +FT+
Sbjct: 499 AGVFTQ 504
>GSVIVT01036719001 assembled CDS
Length = 525
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 3/147 (2%)
Query: 1 LHESIYQSVLDQLVNVYNQVKVGDPLEKGTLLGPLHTSESRKNFXXXXXXXXXXXXXXLT 60
+ E IY+ ++VG+ +G + GPL + + L
Sbjct: 336 VQEGIYEKFAIAFSQAVQSMQVGEGFTEGVVQGPLINEAAVQKVESFVKDAVSKGAKVLL 395
Query: 61 GGSIIKSEGNFVQPTIV-EISPNTDVVKEELFAPVLYVMKFQTLQEAIEINNSVPQGLSS 119
GG F +PT++ +I + + + E+F PV +++F+T +EAI I N GL++
Sbjct: 396 GGKRHSLGMTFYEPTVIGDIKNDMLIARNEVFGPVAPLLRFKTEEEAIRIANDTNAGLAA 455
Query: 120 SIFTRKPEIIFKWIGPQGSDCGIVNVN 146
+FT + + W + + G+V VN
Sbjct: 456 YVFTENVQRM--WRVTEALEYGLVGVN 480
>GSVIVT01036721001 assembled CDS
Length = 559
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 6/156 (3%)
Query: 1 LHESIYQSVLDQLVNVYNQVKVGDPLEKGTLLGPLHTSESRKNFXXXXXXXXXXXXXXLT 60
+ E I+ L ++VG ++G GPL + L
Sbjct: 372 VQEGIHDKFAAALTKAVQTLRVGHGFDEGVTQGPLINQAALHKIEALVEDAVSQGAKVLV 431
Query: 61 GGSIIKSEGNFVQPTI-VEISPNTDVVKEELFAPVLYVMKFQTLQEAIEINNSVPQGLSS 119
GG F +PT+ V+++ + + E+F PVL + +F+T +EAI + N GL+
Sbjct: 432 GGKRHSLGLTFYEPTVLVDVTSDMLISSTEIFGPVLALQRFKTEEEAIHLANDSNAGLAG 491
Query: 120 SIFTRKPEIIFKWIGPQGSDCGIVNVN---IPTNGA 152
I+T W + + GIV VN IP A
Sbjct: 492 YIYTENLRRC--WRVAEAIEFGIVGVNDGLIPAASA 525
>GSVIVT01003951001 assembled CDS
Length = 1306
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 69 GNFVQPTIV-EISPNTDVVKEELFAPVLYVMKFQTLQEAIEINNSVPQGLSSSIFTRKPE 127
GNFV PTI+ +++ N + KEE+F PVL MK +L+EAI I N +SIFT
Sbjct: 788 GNFVGPTILCDVTTNMECYKEEIFGPVLLCMKADSLEEAITIVNRNKCSNGASIFTTSGV 847
Query: 128 IIFKWIGPQGSDCGIVNVNIP 148
K+ + G+V +N+P
Sbjct: 848 AARKF--QNEVEAGLVGINVP 866
>GSVIVT01036720001 assembled CDS
Length = 493
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Query: 1 LHESIYQSVLDQLVNVYNQVKVGDPLEKGTLLGPLHTSESRKNFXXXXXXXXXXXXXXLT 60
+ E IY+ ++VGD +G GPL + + L
Sbjct: 304 VQEGIYEKFATAFSKAVTSLQVGDGFCEGVTQGPLINEAAVQTVESLVQDAISKGAKLLL 363
Query: 61 GGSIIKSEGNFVQPTIV-EISPNTDVVKEELFAPVLYVMKFQTLQEAIEINNSVPQGLSS 119
GG F +PT++ +++ + + ++ P+ +++F+T +EAI I N +GL++
Sbjct: 364 GGKRHNLGMTFYEPTVIGDVNNKMLISRNKICGPIAALLRFKTEEEAICIANDTDEGLAA 423
Query: 120 SIFTR 124
IFT+
Sbjct: 424 YIFTK 428
>GSVIVT01000336001 assembled CDS
Length = 539
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 11 DQLVNVYNQVKVGDPLEKGTLLGPLHTSESRKNF-XXXXXXXXXXXXXXLTGGSII---K 66
D+L+ +KV E LGP+ + E+++ L G +I+
Sbjct: 337 DKLLERAKALKVNSGTEPDADLGPVISKEAKERICKLIQNGVDSGARLVLDGRNIVVPGY 396
Query: 67 SEGNFVQPTIV-EISPNTDVVKEELFAPVLYVMKFQTLQEAIEINNSVPQGLSSSIFT 123
GNF+ PTI+ +++ + + KEE+F PVL ++ +L EAI I N G +SIFT
Sbjct: 397 EHGNFIGPTILSDVTADMECYKEEIFGPVLLCIQADSLDEAINIVNRNKYGNGASIFT 454
>GSVIVT01035003001 assembled CDS
Length = 593
Score = 47.0 bits (110), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 21/158 (13%)
Query: 1 LHESIYQSVLDQLVNVYNQVKVGDPLEKGTLLGPLHTSESRKNFXXXXXXXXXXXXXXLT 60
+H+ IY + ++V + V G PL +G + E +
Sbjct: 336 VHQDIYSKFVAEVVRIVKSVTAGPPLSGKYDMGAICMQEHSEKLQNLVNEALDKGAEFAG 395
Query: 61 GGSIIKSEGN--------FVQPTI-VEISPNTDVVKEELFAPVLYVMKFQTLQEAIEINN 111
GS GN F PT+ V ++ + +++EE F P+L +MKF + +E +++ N
Sbjct: 396 RGSF----GNLGEDAVDQFFPPTVLVNVNHSMQLMQEEAFGPILPIMKFSSDEEVVKLAN 451
Query: 112 SVPQGLSSSIFT---RKPEIIFKWIGPQGSDCGIVNVN 146
GL ++F+ R+ + I I CG+ +N
Sbjct: 452 DSRYGLGCAVFSGSQRRAKAIASQI-----HCGMAAIN 484