Jatropha Genome Database

JcCA0216321.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0216321.10 - phase: 0 
         (133 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01016347001 assembled CDS                                       227   1e-60
GSVIVT01025539001 assembled CDS                                       205   5e-54
GSVIVT01025110001 assembled CDS                                       199   4e-52
GSVIVT01014673001 assembled CDS                                       183   2e-47
GSVIVT01022214001 assembled CDS                                       167   1e-42
GSVIVT01017741001 assembled CDS                                       151   9e-38
GSVIVT01002895001 assembled CDS                                       146   2e-36
GSVIVT01014689001 assembled CDS                                       132   4e-32
GSVIVT01031089001 assembled CDS                                       131   8e-32
GSVIVT01014690001 assembled CDS                                       130   2e-31
GSVIVT01010959001 assembled CDS                                       128   7e-31
GSVIVT01010260001 assembled CDS                                       126   3e-30
GSVIVT01010264001 assembled CDS                                       114   1e-26
GSVIVT01008215001 assembled CDS                                        77   2e-15
GSVIVT01030085001 assembled CDS                                        70   2e-13
GSVIVT01004375001 assembled CDS                                        69   5e-13
GSVIVT01036120001 assembled CDS                                        52   5e-08

>GSVIVT01016347001 assembled CDS
          Length = 176

 Score =  227 bits (579), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 107/116 (92%), Positives = 109/116 (93%)

Query: 1   MAENPTSPAGGSHESGGEQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQ 60
           MA+ P SP GGSHESGG+QSP   VREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQ
Sbjct: 1   MADGPASPPGGSHESGGDQSPRHNVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQ 60

Query: 61  ECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYRE 116
           ECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYL RYRE
Sbjct: 61  ECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLQRYRE 116


>GSVIVT01025539001 assembled CDS
          Length = 161

 Score =  205 bits (521), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 99/116 (85%), Positives = 106/116 (91%), Gaps = 1/116 (0%)

Query: 1   MAENPTSPAGGSHESGGEQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQ 60
           MA+   SP  GSHESG EQ PHS VREQDR+LPIANISRIMKKALPANGKIAKDAK+ +Q
Sbjct: 1   MADAAASPGEGSHESG-EQIPHSNVREQDRFLPIANISRIMKKALPANGKIAKDAKEIMQ 59

Query: 61  ECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYRE 116
           ECVSEFISFITSEASDKCQ+EKRKTINGDDLLWAMATLGFEDYI+PLK+YLA YRE
Sbjct: 60  ECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKLYLAAYRE 115


>GSVIVT01025110001 assembled CDS
          Length = 133

 Score =  199 bits (505), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 101/116 (87%), Positives = 105/116 (90%)

Query: 1   MAENPTSPAGGSHESGGEQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQ 60
           MAE PTSP GG     GE SP S VREQDRYLPIANISRIMKKALPANGKIAKDAK+T+Q
Sbjct: 1   MAEAPTSPGGGGSHESGEHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETLQ 60

Query: 61  ECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYRE 116
           ECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYI+PLKVYL R+RE
Sbjct: 61  ECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKVYLHRFRE 116


>GSVIVT01014673001 assembled CDS
          Length = 210

 Score =  183 bits (465), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 85/117 (72%), Positives = 100/117 (85%), Gaps = 4/117 (3%)

Query: 1   MAENPTSPAGGSHESGGEQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQ 60
           MA++     G ++ +G E SP    REQDR+LPIAN+SRIMKKALPAN KI+KDAK+TVQ
Sbjct: 1   MADSDNDSGGHNNNAGSELSP----REQDRFLPIANVSRIMKKALPANAKISKDAKETVQ 56

Query: 61  ECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
           ECVSEFISFIT EASDKCQ+EKRKTINGDDLLWAM TLGFEDY++PLK+YL R+RE+
Sbjct: 57  ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVDPLKIYLHRFREM 113


>GSVIVT01022214001 assembled CDS
          Length = 291

 Score =  167 bits (423), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 74/92 (80%), Positives = 86/92 (93%)

Query: 26  REQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKT 85
           +EQDR+LPIAN+SRIMKK+LPAN KI+K+AK+TVQECVSEFISFIT EASDKCQ+EKRKT
Sbjct: 105 KEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKT 164

Query: 86  INGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
           INGDDLLWAM  LGFE+Y+ PLKVYL++YRE 
Sbjct: 165 INGDDLLWAMTMLGFENYVGPLKVYLSKYRET 196


>GSVIVT01017741001 assembled CDS
          Length = 138

 Score =  151 bits (381), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 72/123 (58%), Positives = 93/123 (75%), Gaps = 9/123 (7%)

Query: 1   MAENPTSPAGGSHESGGEQSPHSGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQ 60
           M +NP + A  S + G        ++EQDR LPIAN+SRIMK+ LP N KI+K+AK+T+Q
Sbjct: 1   MVDNPGASA--STDDGS-------IKEQDRLLPIANVSRIMKQTLPTNAKISKEAKETMQ 51

Query: 61  ECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREVTNL 120
           ECVSEFISF+T EAS+KC+KE+RKT+NGDD+ WA+A LGF+DY  PLK YL RYRE+   
Sbjct: 52  ECVSEFISFVTGEASEKCKKERRKTVNGDDICWALAALGFDDYAGPLKRYLQRYRELEGD 111

Query: 121 SLL 123
            +L
Sbjct: 112 RVL 114


>GSVIVT01002895001 assembled CDS
          Length = 211

 Score =  146 bits (369), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 61/93 (65%), Positives = 82/93 (88%)

Query: 25  VREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRK 84
           VREQDR++PIAN+ RIM+K LP + KI+ DAK+T+QECVSE+ISFIT EA+++CQ+E+RK
Sbjct: 47  VREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRK 106

Query: 85  TINGDDLLWAMATLGFEDYIEPLKVYLARYREV 117
           TI  +D+LWAM+ LGF+DY+EPL +YL RYRE+
Sbjct: 107 TITAEDVLWAMSKLGFDDYMEPLTMYLHRYREL 139


>GSVIVT01014689001 assembled CDS
          Length = 209

 Score =  132 bits (333), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 57/91 (62%), Positives = 77/91 (84%)

Query: 29  DRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTING 88
           ++Y+PIAN++R+M++ LPA+ KI+ DAK+TVQECVSEFISFITSEA+D+C  E RKTI  
Sbjct: 48  EQYMPIANLTRVMRRVLPAHAKISDDAKETVQECVSEFISFITSEANDRCHHELRKTITA 107

Query: 89  DDLLWAMATLGFEDYIEPLKVYLARYREVTN 119
           +D++ AM+ LGF+DYI+PL +YL RYRE  N
Sbjct: 108 EDVIAAMSKLGFDDYIDPLTLYLHRYRESEN 138


>GSVIVT01031089001 assembled CDS
          Length = 147

 Score =  131 bits (330), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 58/92 (63%), Positives = 72/92 (78%)

Query: 25  VREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRK 84
           V EQD  LPIAN+ RIMK+ LP   KI+K+ K+T+QEC SEFISF+T EASDKC KE RK
Sbjct: 2   VDEQDHLLPIANVGRIMKQILPPRAKISKEGKETMQECASEFISFVTGEASDKCHKENRK 61

Query: 85  TINGDDLLWAMATLGFEDYIEPLKVYLARYRE 116
           T+NGDD+ WA++ LGF+DY E +  YL +YRE
Sbjct: 62  TVNGDDICWALSALGFDDYAEAILRYLHKYRE 93


>GSVIVT01014690001 assembled CDS
          Length = 215

 Score =  130 bits (327), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 54/96 (56%), Positives = 77/96 (80%)

Query: 24  GVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKR 83
           G REQ+ Y+P+A+++R+M++ LPA+ +I+  AK+++QECV EFISFITSEA+D+   E R
Sbjct: 45  GRREQEHYMPMAHLTRVMRRVLPAHAQISDQAKESIQECVCEFISFITSEANDRSHHELR 104

Query: 84  KTINGDDLLWAMATLGFEDYIEPLKVYLARYREVTN 119
           KTI G+D++ AM  LGF+DYIEPL +YL RYR+  N
Sbjct: 105 KTITGEDIIAAMGKLGFDDYIEPLTLYLHRYRQAEN 140


>GSVIVT01010959001 assembled CDS
          Length = 128

 Score =  128 bits (322), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 56/77 (72%), Positives = 67/77 (87%)

Query: 41  MKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGF 100
           MK+ LP N KI+K+AK+T+QECVSEFISF+T EASDKC KEKRKT+NGDD+ WA+ TLGF
Sbjct: 1   MKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALGTLGF 60

Query: 101 EDYIEPLKVYLARYREV 117
           +DY EPLK YL RYRE+
Sbjct: 61  DDYAEPLKRYLHRYREL 77


>GSVIVT01010260001 assembled CDS
          Length = 152

 Score =  126 bits (316), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 55/90 (61%), Positives = 73/90 (81%)

Query: 27  EQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTI 86
           EQD  LPIAN+ RIMK+  P + KI+K+AK+T+QECVSEFI F+T EAS+KCQ+E RKT+
Sbjct: 4   EQDLLLPIANVGRIMKQIPPPSAKISKEAKETMQECVSEFIKFVTGEASEKCQRENRKTV 63

Query: 87  NGDDLLWAMATLGFEDYIEPLKVYLARYRE 116
           NGDD+ WA++ LGF+D+ E +  YL +YRE
Sbjct: 64  NGDDICWALSALGFDDHAEAIVRYLHKYRE 93


>GSVIVT01010264001 assembled CDS
          Length = 152

 Score =  114 bits (285), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 50/90 (55%), Positives = 67/90 (74%)

Query: 27  EQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTI 86
           +QD  LPIAN+ RIMK+ LP   K++K+AK+TVQECVSEF+ F+T EAS KC+KE R+T+
Sbjct: 4   KQDLLLPIANVGRIMKQILPPGAKVSKEAKETVQECVSEFVKFVTGEASAKCRKEDRQTV 63

Query: 87  NGDDLLWAMATLGFEDYIEPLKVYLARYRE 116
             DD+ WA++ LG +DY      YL +YRE
Sbjct: 64  TVDDICWALSALGLDDYAGATVRYLHKYRE 93


>GSVIVT01008215001 assembled CDS
          Length = 155

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 63/89 (70%), Gaps = 2/89 (2%)

Query: 24  GVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKR 83
           G  ++D  LP A +++I+K+ LP + ++A+DA+D + EC  EFI+ I+SE++D C +E++
Sbjct: 8   GKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNDVCSREEK 67

Query: 84  KTINGDDLLWAMATLGFEDYIEPLKVYLA 112
           +TI  + +L A+  LGF +YIE  +VY A
Sbjct: 68  RTIAPEHVLKALEVLGFGEYIE--EVYAA 94


>GSVIVT01030085001 assembled CDS
          Length = 482

 Score = 70.5 bits (171), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 44/57 (77%), Gaps = 4/57 (7%)

Query: 9  AGGSHESGGEQSPHSG----VREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQE 61
          A   ++SGG  + ++      REQDR+LPIAN+SRIMKKALPAN KI+KDAK+TVQ+
Sbjct: 2  ADSDNDSGGHNNSNANSELSAREQDRFLPIANVSRIMKKALPANAKISKDAKETVQD 58


>GSVIVT01004375001 assembled CDS
          Length = 114

 Score = 69.3 bits (168), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 36/65 (55%), Positives = 46/65 (70%), Gaps = 8/65 (12%)

Query: 9  AGGSHESGGEQSPHS--------GVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQ 60
          A   ++SGG Q+ +S          REQDR LPIAN+SRIMKKALPAN KI+KDAK+TVQ
Sbjct: 2  ADSDNDSGGAQNNNSGGNVNSELSAREQDRLLPIANVSRIMKKALPANAKISKDAKETVQ 61

Query: 61 ECVSE 65
          + + +
Sbjct: 62 DIIKD 66


>GSVIVT01036120001 assembled CDS
          Length = 193

 Score = 52.4 bits (124), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 5/89 (5%)

Query: 32  LPIANISRIMKKALPA---NGKI--AKDAKDTVQECVSEFISFITSEASDKCQKEKRKTI 86
           LP   + R++K  L     +G I   KD      E    FI ++++ A+D C++ +R+TI
Sbjct: 12  LPKTIVRRVVKDKLSQFSDDGDIIIHKDGLRAFCESARIFIHYLSATANDLCKESRRQTI 71

Query: 87  NGDDLLWAMATLGFEDYIEPLKVYLARYR 115
           N DD+L A+  + F ++++PLK  L  +R
Sbjct: 72  NADDVLKAIEEIEFPEFVQPLKASLDEFR 100