Jatropha Genome Database
- JcCA0207521.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0207521.20 + phase: 1 /TE/partial
(447 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01038208001 assembled CDS 169 3e-42
GSVIVT01029816001 assembled CDS 159 3e-39
GSVIVT01021964001 assembled CDS 96 2e-20
GSVIVT01032126001 assembled CDS 74 1e-13
GSVIVT01007613001 assembled CDS 68 1e-11
GSVIVT01017026001 assembled CDS 68 1e-11
GSVIVT01036343001 assembled CDS 64 2e-10
GSVIVT01016108001 assembled CDS 58 7e-09
GSVIVT01038695001 assembled CDS 57 2e-08
GSVIVT01037631001 assembled CDS 56 4e-08
GSVIVT01017482001 assembled CDS 55 1e-07
>GSVIVT01038208001 assembled CDS
Length = 364
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 154/281 (54%), Gaps = 27/281 (9%)
Query: 16 ESPSLHISRVKSDGTNFLAWS--CLLFIEARGLQGYLDGGAIKPVSTDPGFNKWKSENSL 73
E+ L I+ K +G N+L WS L+FI + Y+ G + P +T + KW +EN++
Sbjct: 33 ETSHLPITAHKLNGQNYLQWSQSILMFIRGKEKDDYITGASAAPETTASTYKKWIAENNM 92
Query: 74 IMSWLINSMQPTISRGYLLLDTAKKIWDAAS-------------------HETKQGDLTI 114
+MSWL+NSM I +L DTAK+IW+ A H+ +QG+L +
Sbjct: 93 VMSWLVNSMTADIGENFLSFDTAKEIWNTAKETFSDKENTSEIIQIEGILHDLRQGNLMV 152
Query: 115 AQYFAKLSGLWQELDCYQDFQAKCTDDATQVQKLIEVERVYDFLAGLNNEYDQIRVQVLG 174
+YF L+ LW++LD ++ C D +K++E +RV+ FL GLN D+IR +++G
Sbjct: 153 TEYFNTLTRLWRQLDTFEVHNWNCVTDGFLYKKIVEGKRVFKFLLGLNKNLDEIRGRIMG 212
Query: 175 *DPFPSLQQAYSFVQ*EKTRRNAMVHRSTIDKAGLISNSAREYIQDAKNSSSDK---DQL 231
P PSL++A+S V+ E++R+N M+ + + + +SA + Q A + K +
Sbjct: 213 VKPLPSLREAFSEVRREESRKNLMM--GSHQQLNMAESSALK-TQFAPFDNRQKIKGGRP 269
Query: 232 FCDYCGKNRHTKEFCWKLHGRPTKGRGGKRISSSRPQTHIS 272
+CD+C K H++E CWK+HG+P + + + H++
Sbjct: 270 WCDHCRKPGHSRETCWKIHGKPVDWKPRQPLEKEGRGNHVA 310
>GSVIVT01029816001 assembled CDS
Length = 1050
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 114/200 (57%), Gaps = 21/200 (10%)
Query: 16 ESPSLHISRVKSDGTNFLAWS--CLLFIEARGLQGYLDGGAIKPVSTDPGFNKWKSENSL 73
E+P+L I+ K +G NFL WS LFI +G GYL G P D + W SENS+
Sbjct: 578 ENPTLQITIHKLNGCNFLKWSQSVKLFIRVKGKLGYLIGANKAPKPEDHVYQTWDSENSM 637
Query: 74 IMSWLINSMQPTISRGYLLLDTAKKIWDAASH-------------------ETKQGDLTI 114
+M+WLINSM+ I + YL L TAK +WD + KQG ++
Sbjct: 638 VMAWLINSMETAIGQTYLFLPTAKDLWDEVQETYSDLGNATQMFEIKTKLKDIKQGSHSV 697
Query: 115 AQYFAKLSGLWQELDCYQDFQAKCTDDATQVQKLIEVERVYDFLAGLNNEYDQIRVQVLG 174
QY+ L WQELD + + + KC +D K++E ER +DFLAGLN E D++R Q+LG
Sbjct: 698 TQYYNILPNAWQELDLFSNMEWKCAEDNAHYCKILEKERAFDFLAGLNKELDEVRGQILG 757
Query: 175 *DPFPSLQQAYSFVQ*EKTR 194
+P PS+++ +S V+ EK+R
Sbjct: 758 KEPLPSVREIFSEVRREKSR 777
>GSVIVT01021964001 assembled CDS
Length = 191
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 73/133 (54%), Gaps = 4/133 (3%)
Query: 316 NSGNAFLTFLAKIAK----PSWVIDSGANKHTTGSRKHFLTYSKYQGTDKIRIADGSLVP 371
NSG L+F ++ SW+IDS A H T + F TY+ KI +A+GSL
Sbjct: 4 NSGTPSLSFCINVSHRVYDDSWIIDSDATNHMTSKSQLFNTYTLNPSNKKIVVANGSLAT 63
Query: 372 IAGTGSIDCTSNIKLSHVLHVPRFPINLLSVSLITKALNCKVTFYPTHCIF*ELNTGRMI 431
IAG G I T + L +V HVP+F NL+S+ +T L C V F P++C+ E +GR I
Sbjct: 64 IAGFGDIYITPTLILKNVHHVPKFSANLVSIQKLTHDLKCYVIFLPSYCVLQEQGSGRRI 123
Query: 432 GSGSLRDGLYLLD 444
G R GLY L+
Sbjct: 124 GLAKERSGLYHLE 136
>GSVIVT01032126001 assembled CDS
Length = 382
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Query: 333 WVIDSGANKHTTGSRKHFLTYSKYQGTDKIRIADGSLVPIAGTGSIDCTSNIKLSHVLHV 392
W++DSGA H SR F ++ + + +G VP+ GTGS+ +++ L +VL V
Sbjct: 240 WILDSGATHHVCYSRASFEPFTP-TFNSFVALPNGHTVPVGGTGSVRLCNDLTLQNVLFV 298
Query: 393 PRFPINLLSVSLITKALNCKVTFYPTHCIF*ELNTGRMIGSGSLRDGLYLLD 444
P+F NLLS+S +T+ V+F+ H + + GR IG G + LY LD
Sbjct: 299 PQFHCNLLSISALTQQHPYVVSFHSDHYVIEDPTQGRKIGIGRQANNLYTLD 350
>GSVIVT01007613001 assembled CDS
Length = 128
Score = 67.8 bits (164), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 316 NSGNAFLTFLA----KIAKPSWVIDSGANKHTTGSRKHFLTYSKYQGTDKIRIADGSLVP 371
NSG +F ++ SW+IDSGA H T + F TY+ KI +A+GSLV
Sbjct: 4 NSGTPSFSFCINASHRVYDESWIIDSGATDHMTSKSQLFNTYTPSPSNKKIVVANGSLVT 63
Query: 372 IAGTGSIDCTSNIKLSHVLHVPRFPINLLSVSLITKALNCKVTF 415
+ G G I T + L +VLHVP+ NL + LN + F
Sbjct: 64 VVGFGDIYITPTLILKNVLHVPKLSANLFPFKSLPMILNVMLFF 107
>GSVIVT01017026001 assembled CDS
Length = 1273
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 333 WVIDSGANKHTTGSRKHFLTYSKYQGTDKIRIADGSLVPIAGTGSIDCTSNIKLSHVLHV 392
W +D+GA+ H T Y G D + + +G+ +PI TG++ NI L VL V
Sbjct: 873 WFLDTGASAHMTTDPSILDQSKNYMGKDSVIVGNGASLPITHTGTLSSVPNIHLLDVLVV 932
Query: 393 PRFPINLLSVSLITKALNCKVTFYPTHCIF*ELN--TGRMIGSGSLRDGLYLLD 444
P NLLS+S +T VTF T+ +F N TGR++ +G GLY+L+
Sbjct: 933 PHLIKNLLSISKLTSDFPLSVTF--TNNLFTVQNRQTGRVVATGKRDGGLYVLE 984
>GSVIVT01036343001 assembled CDS
Length = 1201
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 98/466 (21%), Positives = 183/466 (39%), Gaps = 80/466 (17%)
Query: 21 HISRVKSDGTNFLAWSCLL--FIEARGLQGYLDGGAIKPVST------DPGFNKWKSENS 72
H +K D N + W + I A G + +++G P T +P F W+ +
Sbjct: 127 HPLPIKLDRDNHILWHTQMENVIYANGFEDHIEGLRPCPPKTISTGEVNPDFLVWRRYDR 186
Query: 73 LIMSWLINSMQPTISRGYLLLDTAKKIWDA------ASHETKQGDLTIAQYFAKLSGLWQ 126
+I+SW+ +S+ P + + L T+ + W A AS + + L +A
Sbjct: 187 MILSWIYSSLTPDVMGQIVGLQTSHEAWTALQRSFSASTKARTMQLRLA----------- 235
Query: 127 ELDCYQDFQAKCTDDATQVQKLIEVERVYDFLAGLNN---EYDQIRVQVLG*DPFPSLQQ 183
FQ T ++ + +++ + D LA + E DQI +Q+L L
Sbjct: 236 -------FQTNKKGSLTMMEYIQKLKHISDSLAAIGEPVPEKDQI-LQLLS-----GLGA 282
Query: 184 AYSFVQ*EKTRRNAMVHRSTIDKAGLISNSAREYIQDAKNSSSDKDQLFCDYCGKNRHTK 243
Y+ + T R+ + + L+++ R +Q + +++D L ++ NR +
Sbjct: 283 EYNPIIASLTTRDDDIQLHAVHSI-LLTHEQRLPLQ---TTPTEEDLLIANFATHNRPRR 338
Query: 244 EFCWKLHGRPTKGRGGKR-ISSSRPQTHISDSGTLSE------------------EPSTA 284
+P++G+ + + + RP T + + +
Sbjct: 339 ----SQSKKPSQGKPPQSFMPTIRPDTLLDSRQQYPQGYRPNRFNNNRSRTNNRPQCQLC 394
Query: 285 ESFSDKEIQSLKRLWSQLD*SSTQTAASNFVNSGNAFLTFLAKIAKPS------WVIDSG 338
F + R ++ + AS+ G L A +A PS W +DS
Sbjct: 395 GKFGHMVLSCYHRF--DVNYQGPRAPASSTSQIGPIPLA-QAMMAAPSPTLMDSWFLDSS 451
Query: 339 ANKHTTGSRKHFLTYSKYQGTDKIRIADGSLVPIAGTGSIDCTSNIK---LSHVLHVPRF 395
A H + + + + Y GTD + + +G +PI G ++ K L +VL+VP+
Sbjct: 452 ATHHLSHTAANIHNGTPYNGTDSVMVDNGKSLPITQVGHSFLHTSAKPFVLHNVLYVPQL 511
Query: 396 PINLLSVSLITKALNCKVTFYPTHCIF*ELNTGRMIGSGSLRDGLY 441
NL+SVS N + F+P+ + +T + G L GLY
Sbjct: 512 TSNLISVSKFCTDNNTIMEFHPSSFFVKDKDTKVTLLQGQLERGLY 557
>GSVIVT01016108001 assembled CDS
Length = 227
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 48/227 (21%)
Query: 14 HSESPSLHIS-RVKSDGTNFLAW--SCLLFIEARGLQGYLDGGAIKPV-------STDPG 63
H PSL+ + V+ D +N+L W L I A GL+ + G P + +P
Sbjct: 19 HHTMPSLNQAFTVRLDQSNYLLWRTQMLNIIIANGLEEMIHGKIPAPSRFLGDSENINPE 78
Query: 64 FNKWKSENSLIMSWLINSMQPTISRGYLLLDTAKKIWDAAS------------------H 105
++ W+ +N L+M W+ +S+ + + LDTA +IW A
Sbjct: 79 YSIWQCQNRLVMCWIYSSLTKGVMAQIIGLDTASEIWTALEKIFSAASKARIMQLHFQLQ 138
Query: 106 ETKQGDLTIAQYFAKLSGLWQELDCYQDFQAKCTDDATQV-QKLIEVERVYDFLAGLNNE 164
TK+G L++ +Y K+ + D+ + + + E +R+ LAGL +
Sbjct: 139 TTKKGGLSMMEYLLKIKSI--------------VDNLLAIGENITEQDRILYLLAGLGAK 184
Query: 165 YDQIRVQVL-G*DPFPSLQQAYSFVQ*EKTRRNAMVHRSTIDKAGLI 210
Y+ + V G +P SL++ +S + T N + + T ++ L+
Sbjct: 185 YNSFVITVTSGHEPL-SLEEIHSML---LTHENRLEQQHTTEERNLL 227
>GSVIVT01038695001 assembled CDS
Length = 740
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 95/229 (41%), Gaps = 55/229 (24%)
Query: 233 CDYCGKNRHTKEFCWKLHGRPTK-----GRGG--KRISSSRPQTHISDSGTLSEEPSTAE 285
C +C K H+ + CW RP G+ G +RI ++ Q EE S A
Sbjct: 136 CPHCKKTNHSPQKCW---WRPDVKCNKCGKQGNMERICKNQQQ----------EETSAAV 182
Query: 286 SFSDKEIQSLKRLWSQLD*SSTQTAASNFVNSGNAFLTFLAKIAKPSWVIDSGANKHTTG 345
+ +E QL AA+ F N K SW++DSG H T
Sbjct: 183 DYCQEE---------QL------FAATCFAN----------KSTSKSWLVDSGCTNHMTN 217
Query: 346 SRKHFLTYSKYQGTDKIRIADGSLVPIAGTGS--IDCTSNIKLSH-VLHVPRFPINLLSV 402
++ F + K+RI +G +P+ G G+ I+ + +KL + VL VP NLLSV
Sbjct: 218 NQDLFRELDR-TTISKVRIGNGEYIPVKGKGTVAIESQTGLKLIYDVLFVPDIDQNLLSV 276
Query: 403 -SLITKALNCKVTFYPTHCIF*ELNTGRMIG---SGSLRDGLYLLDDVC 447
L+ K KV F +CI + + G D L+ +D+C
Sbjct: 277 GQLVEKEF--KVYFEDRNCIIKDAEGKEVFNIKMKGKSFDPLFWCNDIC 323
>GSVIVT01037631001 assembled CDS
Length = 1940
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 176/449 (39%), Gaps = 87/449 (19%)
Query: 16 ESPSLHISRVKSDGTNFLAWSCLLFIEARGL---QGYLDGGAIKPVSTDPGFNKWK---- 68
E SL ++ DG N+ W+ + + + L + + + P+ +P + K
Sbjct: 721 EESSLTVALSILDGDNYETWAVRMTVHLQALDVWEAVEENYEVPPLGANPTVAQMKLHKE 780
Query: 69 --SENSLIMSWLINSMQPTISRGYLLLDTAKKIWDAASHETKQGDLTIAQYFAKLSGLWQ 126
+ + + L ++ P+I + +D+A +IW+ E K GD I ++ L +
Sbjct: 781 RRTRKAKAKACLFAAVSPSIFIKIMKIDSAAEIWEYLKEEYK-GDERIKNM--QVMNLIR 837
Query: 127 EL--------DCYQDFQAKCTDDATQVQKL---IEVERVYD-FLAGLNNEYDQIRVQV-- 172
E D +D+ A+ A +V+ L E++ L L +Y+ +
Sbjct: 838 EFEMKKMRESDAVKDYAAQLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEATISSLEN 897
Query: 173 ---LG*DPFPSLQQAYSFVQ*EKTRRNAMVHRSTIDKAGLISNSAREYIQDAKNSSSDKD 229
L L + V+ + R +A + N+ + + N S +
Sbjct: 898 SKDLSTISLTELLHSLEAVEQRRLMRQGDTAEGAF-QARMQKNAGHKNGKVNNNKSCGNN 956
Query: 230 Q---LF--CDYCGKNRHTKEFCWKLHGRPTK-----GRGG--KRISSSRPQTHISDSGTL 277
Q +F C +C K H+ + CW RP G+ G +RI ++ Q
Sbjct: 957 QKNGVFPPCPHCKKTNHSPKKCW---WRPDVKCNKCGKQGHVERICKNQQQ--------- 1004
Query: 278 SEEPSTAESFSDKEIQSLKRLWSQLD*SSTQTAASNFVNSGNAFLTFLAKIAKPSWVIDS 337
EE + + +E QL AA+ F N + SW++DS
Sbjct: 1005 -EETNAVVDYCQEE---------QL------FAATCFANKSTS----------KSWLVDS 1038
Query: 338 GANKHTTGSRKHFLTYSKYQGTDKIRIADGSLVPIAGTGS--IDCTSNIKLSH-VLHVPR 394
G H T ++ F + K+RI +G +P+ G G+ I+ + +KL + VL VP
Sbjct: 1039 GCTNHMTNNQDLFRELDR-TTISKVRIGNGEYIPVKGKGTVAIESQTGLKLIYDVLFVPD 1097
Query: 395 FPINLLSV-SLITKALNCKVTFYPTHCIF 422
NLLSV L+ K KV F +CI
Sbjct: 1098 IDQNLLSVGQLVEKEF--KVYFEDRNCII 1124
>GSVIVT01017482001 assembled CDS
Length = 216
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 333 WVIDSGANKHTTGSRKHFLTYSKYQGTDKIRIADGSLVPIAGTGSIDC-----TSNIKLS 387
W+IDSG + H TG ++ S+Y+G + + S +PIA G+ T+++ L
Sbjct: 126 WIIDSGCSNHMTGDKEKLQDLSEYKGRHMVVTVNNSKLPIAHIGNTIVSSQYNTNDVSLQ 185
Query: 388 HVLHVPRFPINLLSVSLIT 406
+V HVP NLLSV+ +T
Sbjct: 186 NVYHVPGMKKNLLSVAQLT 204