Jatropha Genome Database
- JcCA0206791.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0206791.10 + phase: 0 /partial
(273 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01016368001 assembled CDS 436 e-123
GSVIVT01009126001 assembled CDS 131 3e-31
GSVIVT01021910001 assembled CDS 130 5e-31
GSVIVT01003183001 assembled CDS 127 4e-30
GSVIVT01010995001 assembled CDS 127 6e-30
GSVIVT01033011001 assembled CDS 119 2e-27
GSVIVT01017859001 assembled CDS 53 1e-07
GSVIVT01030257001 assembled CDS 52 3e-07
GSVIVT01031163001 assembled CDS 51 6e-07
GSVIVT01024623001 assembled CDS 49 2e-06
>GSVIVT01016368001 assembled CDS
Length = 598
Score = 436 bits (1121), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/272 (80%), Positives = 234/272 (86%), Gaps = 1/272 (0%)
Query: 1 ARNVIGDRGLEVLASSCKRLKRLRIERGADEQGMEDEEGVVSQRGLIALAQGCLELEYMA 60
ARNVIGDRGLEVLA SCK+L+RLRIERGADEQ MEDEEGVVSQRGL+ALA+GCLE+EY+A
Sbjct: 327 ARNVIGDRGLEVLAQSCKKLRRLRIERGADEQEMEDEEGVVSQRGLMALARGCLEIEYVA 386
Query: 61 VYVSDITNAALEHIGACLKNLNDFRLVLLDREERITDLPLDNGVRALLRHCEKLRRFALY 120
+YVSDITNAALE IGA K L DFRLVLL+REERITDLPLDNGVRALLR C+KLRRFALY
Sbjct: 387 IYVSDITNAALECIGAHSKKLCDFRLVLLEREERITDLPLDNGVRALLRGCQKLRRFALY 446
Query: 121 LRQGGLTDVGLGYIGQYSQNVRWMLLGYVGESDEGLLAFSKGCPSLQKLEMRGCCFTESA 180
LR GGLTDVGL YIGQYS NVRWMLLGYVGESD GLL FS+GCPSLQKLEMRGCCF+E A
Sbjct: 447 LRSGGLTDVGLNYIGQYSPNVRWMLLGYVGESDAGLLEFSRGCPSLQKLEMRGCCFSERA 506
Query: 181 LARAVMQLTSLRYLWVQGYKASSIPGRDLLTMARPFWNIELIPLRKVAMVNQVGEDAVVE 240
LA A MQLTSLRYLWVQGY+AS GRDLL MARPFWNIELIP R V + E +E
Sbjct: 507 LAVAAMQLTSLRYLWVQGYRASET-GRDLLVMARPFWNIELIPSRGVTINAPDREPVSIE 565
Query: 241 QPAHILAYYSLAGPRTDFPECVLPLDPMRLVS 272
PAHILAYYSLAGPRTDFP V PLDP ++
Sbjct: 566 HPAHILAYYSLAGPRTDFPSTVTPLDPASFLT 597
>GSVIVT01009126001 assembled CDS
Length = 552
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 141/262 (53%), Gaps = 18/262 (6%)
Query: 3 NVIGDRGLEVLASSCKRLKRLRIERGADEQGMEDEEGVVSQRGLIALAQGCLELEYMAVY 62
+ + D GL+ +A++CK L+ LR+ ED EG VS+ GL A+++GC +L+ + +
Sbjct: 304 DSVCDEGLQAVAATCKELRELRV---FPIDAREDSEGPVSEVGLQAISEGCRKLQSILYF 360
Query: 63 VSDITNAALEHIGACLKNLNDFRLVLLDRE--ERITDLPLDNGVRALLRHCEKLRRFALY 120
+TNAA+ + +L FRL ++ R + IT P+D G A++ +C+KL R A+
Sbjct: 361 CQRMTNAAVIAMSKNCPDLVVFRLCIMGRHRPDHITGEPMDEGFGAIVMNCKKLTRLAI- 419
Query: 121 LRQGGLTDVGLGYIGQYSQNVRWMLLGYVGESDEGLLAFSKGCPSLQKLEMRGCCFTESA 180
G LTD YIG+Y + VR + + + G+SD GL +GCP LQKLE+R F ++A
Sbjct: 420 --SGLLTDKAFSYIGKYGKLVRTLSVAFAGDSDMGLKYVLEGCPKLQKLEIRDSPFGDAA 477
Query: 181 LARAVMQLTSLRYLWVQGYKASSIPGRDLLTMARPFWNIELIPLRKVAMVNQVGEDAVVE 240
L + ++R+LW+ + S G + + A P +E+I N+ ED +
Sbjct: 478 LRSGLHHYYNMRFLWMSSCRLSR-QGCEEIARAMPGLVVEVI-------RNENEEDK--D 527
Query: 241 QPAHILAYYSLAGPRTDFPECV 262
+ Y SL PR D PE V
Sbjct: 528 GFEILYMYRSLERPRIDAPEFV 549
>GSVIVT01021910001 assembled CDS
Length = 471
Score = 130 bits (328), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 140/266 (52%), Gaps = 13/266 (4%)
Query: 3 NVIGDRGLEVLASSCKRLKRLRIERGADEQGMEDEEGVVSQRGLIALAQGCLELEYMAVY 62
+ I D GL LA SCK L+ LR+ +D G E + Q GL++++ GC +L + +
Sbjct: 209 DYIEDTGLIALAESCKDLRELRV-FPSDPFGQEPNVSLTEQ-GLVSVSAGCPKLHSVLYF 266
Query: 63 VSDITNAALEHIGACLKNLNDFRLVLLDR--EERITDLPLDNGVRALLRHCEKLRRFALY 120
++N AL I NL FRL +++R + IT PLD G A++ HC+ L+R +L
Sbjct: 267 CRRMSNVALSTIARNRPNLTRFRLCIIERFRPDYITQEPLDVGFGAIVEHCKDLKRLSL- 325
Query: 121 LRQGGLTDVGLGYIGQYSQNVRWMLLGYVGESDEGLLAFSKGCPSLQKLEMRGCCFTESA 180
G LTD YIG + + + + L + G+SD GL GC SL+KLE+R C F + A
Sbjct: 326 --SGLLTDRVFEYIGSHGKKLEMLSLAFAGDSDLGLHHVLSGCKSLRKLEIRDCPFGDKA 383
Query: 181 LARAVMQLTSLRYLWVQGYKASSIPGRDLLTMARPFWNIELIPLRKVAMVNQVGEDAVVE 240
L +L ++R LW+ + S + LL P N+E+I + + ++ VE
Sbjct: 384 LLANAAKLETMRSLWMSACQVSYRACK-LLGQKMPRLNVEVI--AEQGHPDSSPDEYPVE 440
Query: 241 QPAHILAYYSLAGPRTDFPECVLPLD 266
+ + Y +++GPR+D P V +D
Sbjct: 441 K---LYIYRTVSGPRSDMPSFVWTMD 463
>GSVIVT01003183001 assembled CDS
Length = 553
Score = 127 bits (320), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 137/265 (51%), Gaps = 18/265 (6%)
Query: 3 NVIGDRGLEVLASSCKRLKRLRIERGADEQGMEDEEGVVSQRGLIALAQGCLELEYMAVY 62
+ + D+GLE + SC L+ LR+ AD + GV ++ G +A++ GC L Y+ +
Sbjct: 305 DTVEDKGLEAVGLSCPLLEELRV-FPADPYEQDVVHGV-TEMGFVAVSYGCPRLHYVLYF 362
Query: 63 VSDITNAALEHIGACLKNLNDFRLVLLD--REERITDLPLDNGVRALLRHCEKLRRFALY 120
+TNAA+ I + FRL +++ + +TD P+D A++++C KL+R A+
Sbjct: 363 CRQMTNAAVATIVKNCPDFTHFRLCVMNPGEPDYLTDEPMDEAFGAVVKNCTKLQRLAV- 421
Query: 121 LRQGGLTDVGLGYIGQYSQNVRWMLLGYVGESDEGLLAFSKGCPSLQKLEMRGCCFTESA 180
G LTD+ YIG+Y++N+ + + + G SD G+ GC L+KLE+R C F A
Sbjct: 422 --SGLLTDLTFEYIGKYAKNLETLSVAFAGSSDWGMQCVLSGCSKLRKLEIRDCPFGNEA 479
Query: 181 LARAVMQLTSLRYLWVQGYKASSIPGRDLLTMARPFWNIELIPLRKVAMVNQVGEDAVVE 240
L + + S+R LW+ + R L P N+E+ M ++ +D+
Sbjct: 480 LLSGLEKYESMRSLWMSACNVTMNACRR-LAKQMPRLNVEV-------MKDEESDDS--- 528
Query: 241 QPAHILAYYSLAGPRTDFPECVLPL 265
Q + Y S+AGPR D P VL L
Sbjct: 529 QADKVYVYRSVAGPRRDAPPFVLTL 553
>GSVIVT01010995001 assembled CDS
Length = 466
Score = 127 bits (319), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 137/262 (52%), Gaps = 13/262 (4%)
Query: 3 NVIGDRGLEVLASSCKRLKRLRIERGADEQGMEDEEGVVSQRGLIALAQGCLELEYMAVY 62
+ I D GL+ LA+SCK L+ LR+ ++ ME + Q GL+++++GC +L + +
Sbjct: 209 DYIEDSGLDALAASCKDLQELRV-FPSEPYDMEGNVALTEQ-GLVSVSEGCPKLHSVLYF 266
Query: 63 VSDITNAALEHIGACLKNLNDFRLVLLDREER--ITDLPLDNGVRALLRHCEKLRRFALY 120
+TNAAL I N+ FRL +++ R T PLD G A++ HC++L R +L
Sbjct: 267 CRQMTNAALVSIAKNRPNMTRFRLCIIEPRTRDYQTLEPLDVGFGAIVEHCKELHRLSL- 325
Query: 121 LRQGGLTDVGLGYIGQYSQNVRWMLLGYVGESDEGLLAFSKGCPSLQKLEMRGCCFTESA 180
G LTD YIG +++ + + + + G+ D GL GC SL+KLE+R C F + A
Sbjct: 326 --SGLLTDRVFEYIGTHAKKLEMLSVAFAGDGDLGLHHVLSGCKSLRKLEIRDCPFGDKA 383
Query: 181 LARAVMQLTSLRYLWVQGYKASSIPGRDLLTMARPFWNIELIPLRKVAMVNQVGEDAVVE 240
L +L ++R LW+ S LL P N+E++ R + E VE
Sbjct: 384 LLANAAKLETMRSLWMSSCSV-SFGACKLLGQKMPRLNVEVMDER--GRPDSRPESCSVE 440
Query: 241 QPAHILAYYSLAGPRTDFPECV 262
+ + Y S+AGPR+D P V
Sbjct: 441 K---LYIYRSVAGPRSDMPRFV 459
>GSVIVT01033011001 assembled CDS
Length = 534
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 136/262 (51%), Gaps = 13/262 (4%)
Query: 3 NVIGDRGLEVLASSCKRLKRLRIERGADEQGMEDEEGVVSQRGLIALAQGCLELEYMAVY 62
+ IGD+GL V+A +CK L+ LR+ +D G+ + V++ GL+A++ GC +L + +
Sbjct: 210 DCIGDKGLGVVACTCKELQELRV-FPSDPFGVGN--AAVTEEGLVAISFGCPKLHSLLYF 266
Query: 63 VSDITNAALEHIGACLKNLNDFRLVLLD--REERITDLPLDNGVRALLRHCEKLRRFALY 120
+TNAAL I N FRL +LD + + +T PLD G A+++ C +
Sbjct: 267 CQQMTNAALITIAKNCPNFTRFRLCILDATKADPVTMQPLDEGFGAIVQSC---KGLRRL 323
Query: 121 LRQGGLTDVGLGYIGQYSQNVRWMLLGYVGESDEGLLAFSKGCPSLQKLEMRGCCFTESA 180
G LTD YIG Y++ + + + + G+SD+G+L GC L+KLE+R C F A
Sbjct: 324 SLSGLLTDQVFLYIGMYAEQLEMLSIAFAGDSDKGMLYVLNGCKKLRKLEIRDCPFGNVA 383
Query: 181 LARAVMQLTSLRYLWVQGYKASSIPGRDLLTMARPFWNIELIPLRKVAMVNQVGEDAVVE 240
L V + ++R LW+ + ++ G +L P N+E+I + G D +
Sbjct: 384 LLTDVGKYETMRSLWMSSCEV-TLGGCKVLAEKMPRINVEIINEYDQM---EFGFDD-RQ 438
Query: 241 QPAHILAYYSLAGPRTDFPECV 262
+ + Y +L GPR D P V
Sbjct: 439 KVDKMFLYRTLVGPRKDAPHFV 460
>GSVIVT01017859001 assembled CDS
Length = 611
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 60/240 (25%)
Query: 5 IGDRGLEVLASSCKRLKRLRIERGADEQGMEDEEGVVSQRGLIALAQGCLELEYMAVYVS 64
I D LE + S C+ L+ L + D + + +E G++A+A+GC L+ + +
Sbjct: 228 ITDISLEAVGSHCRSLETLSL----DSEFIHNE-------GVLAVAEGCRLLKVLKLLCI 276
Query: 65 DITNAALEHIGACLKNLNDFRLVLLDREERITDLPLDNGVRALLRHCEKLRRFALYLRQG 124
++T+ ALE +G C C L ALY Q
Sbjct: 277 NVTDEALEAVGTC---------------------------------CLSLEVLALYSFQ- 302
Query: 125 GLTDVGLGYIGQYSQNVRWMLLG--YVGESDEGLLAFSKGCPSLQKLEMRGC----CFTE 178
TD L IG+ + ++ ++L Y SD+GL A + GC L LE+ GC
Sbjct: 303 KFTDRSLSAIGKGCKKLKNLILSDCYF-LSDKGLEAIATGCSELIHLEVNGCHNIGTLGL 361
Query: 179 SALARAVMQLTSLRYLWVQGYKASSIPGRDLLTMARPFWNIELIPLRKVAMVNQVGEDAV 238
+++ ++ ++LT L L+ Q I LL + R ++ + L + +G+DA+
Sbjct: 362 ASVGKSCLRLTELALLYCQ-----RIGDNALLEIGRGCKFLQALHLVDCS---SIGDDAI 413
>GSVIVT01030257001 assembled CDS
Length = 663
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 30/176 (17%)
Query: 5 IGDRGLEVLASSCKRLKRLRIERGADEQGMEDEEGVVSQRGLIALAQGCLELEYMAV-YV 63
I D GL + C +L L + R G+ D G++A+A GC LE + V Y
Sbjct: 443 ITDEGLGHVGMCCSKLIELDLYRCV---GITDS-------GILAIAHGCPGLEMINVAYC 492
Query: 64 SDITNAALEHIGACLKNLNDFRLVLLDREER----ITDLPLDNGVRALLRHCEKLRRFAL 119
DIT+++L + C + LN F E R IT L G+ A+ C++L + +
Sbjct: 493 KDITDSSLISLSKCPR-LNTF-------ESRGCPSITSL----GLAAIAVGCKQLAKLDI 540
Query: 120 YLRQGGLTDVGLGYIGQYSQNVRWMLLGYVGESDEGLLAF-SKGC-PSLQKLEMRG 173
+ + D G+ + +SQN+R + L Y +D GLL+ S C S+ L ++G
Sbjct: 541 K-KCHNINDAGMIPLAHFSQNLRQINLSYSSVTDVGLLSLASISCLQSMTILHLKG 595
>GSVIVT01031163001 assembled CDS
Length = 643
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 36/161 (22%)
Query: 5 IGDRGLEVLASSCKRLKRLRIER----GADEQGMEDEEGVVSQRGLIALAQGCLELEYMA 60
I D+GL +AS+CK+L+ L + R G DE L AL+ GC +LE +
Sbjct: 442 ISDKGLFYIASNCKKLRELDLYRCNSIGNDE--------------LAALSSGCKKLEKLN 487
Query: 61 V-YVSDITNAALEHIGACLKNLNDFRLVLLDREERITDLPLDNGVRAL----LRHCEKLR 115
+ Y S++T+ +E+I LK+L+D L L + + G L L+HC+K++
Sbjct: 488 LSYCSEVTDTGMEYISQ-LKDLSDLELRGLVKITSTGLTAVAAGCMRLAELDLKHCQKIK 546
Query: 116 RFALYLRQGGLTDVGLGYIGQYSQNVRWMLLGYVGESDEGL 156
D G + YS+N+R + L S+ GL
Sbjct: 547 ------------DSGFWALAYYSRNLRQINLSNCTVSNMGL 575
>GSVIVT01024623001 assembled CDS
Length = 702
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 5 IGDRGLEVLASSCKRLKRLRIERGADEQGMEDEEGVVSQRGLIALAQGCLELEYM-AVYV 63
I D G+ + + C +L + + R ++ G+ A+A GC +LE + Y
Sbjct: 484 ITDDGIAHVGTGCPKLTEIDLYRCI----------CITDVGIEAIAHGCPDLEMINTAYC 533
Query: 64 SDITNAALEHIGACLKNLNDFRLVLLDREERITDLPLDNGVRALLRHCEKLRRFALYLRQ 123
+T+A+LE + CL+ L E R G+ A+ C +L + +
Sbjct: 534 DKVTDASLESLSKCLR--------LKALEIRGCPGVSSVGLSAIALGCRQLMMLDIK-KC 584
Query: 124 GGLTDVGLGYIGQYSQNVRWMLLGYVGESDEGLLAFSKGCPSLQK---LEMRGCCFTESA 180
+ DVG+ + Q+SQN++ + Y +D GLLA + SLQ L + G T +
Sbjct: 585 HHINDVGMVPLAQFSQNLKQINFSYCSVTDVGLLALA-SISSLQNITILHLTG--LTSNG 641
Query: 181 LARAVMQLTSLRYLWVQGYKASSIP 205
LA A++ L + + + +P
Sbjct: 642 LAAALLACKGLMKVKLHRFFKRLLP 666