Jatropha Genome Database

JcCA0193141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0193141.10 + phase: 2 /partial
         (228 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01010359001 assembled CDS                                       409   e-115
GSVIVT01025339001 assembled CDS                                       279   6e-76
GSVIVT01016738001 assembled CDS                                       276   7e-75
GSVIVT01025340001 assembled CDS                                       265   2e-71
GSVIVT01025341001 assembled CDS                                       262   1e-70
GSVIVT01025342001 assembled CDS                                       242   1e-64
GSVIVT01000084001 assembled CDS                                       231   3e-61
GSVIVT01005215001 assembled CDS                                       201   2e-52
GSVIVT01032029001 assembled CDS                                       154   2e-38
GSVIVT01017943001 assembled CDS                                        69   3e-12
GSVIVT01000083001 assembled CDS                                        62   2e-10

>GSVIVT01010359001 assembled CDS
          Length = 920

 Score =  409 bits (1052), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 194/228 (85%), Positives = 209/228 (91%)

Query: 1   DGLLIWSAIKEWVESYVNHFYSEHKSVTSDVELQVWWDEIRNKGHYDKRNEPWWPELNTK 60
           DGLLIWSAIKEWVESYV+HFYSE  +VTSD+ELQ WW+EI+N+GHYDKRNE WWP+LNTK
Sbjct: 693 DGLLIWSAIKEWVESYVDHFYSEPNTVTSDLELQAWWNEIKNEGHYDKRNESWWPKLNTK 752

Query: 61  EDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQEDDPDYEKFILNPQH 120
           E LSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIP EDD  YEKF+LNPQ 
Sbjct: 753 EHLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPHEDDSAYEKFLLNPQS 812

Query: 121 TFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDHEILQMFNKFSSRLE 180
           TFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQ + LHSHWI D E+L MF KFS++LE
Sbjct: 813 TFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQTHHLHSHWIKDPEVLDMFKKFSAKLE 872

Query: 181 EIEQIINNRNKDPRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 228
           EIE+II  RNK+  LKNRNGAGIPPYELLLP+SGPGVTGRGIPNSISI
Sbjct: 873 EIEEIIKGRNKNIHLKNRNGAGIPPYELLLPSSGPGVTGRGIPNSISI 920


>GSVIVT01025339001 assembled CDS
          Length = 901

 Score =  279 bits (714), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 133/230 (57%), Positives = 165/230 (71%), Gaps = 4/230 (1%)

Query: 1   DGLLIWSAIKEWVESYVNHFYSEHKSVTSDVELQVWWDEIRNKGHYDKRNEPWWPELNTK 60
           DGLL+W AIKEWV  YVN FY +   V SD ELQ WW EIR +GH DK++E WWP+L T 
Sbjct: 674 DGLLLWDAIKEWVTDYVNFFYKDASMVKSDAELQAWWTEIRTRGHEDKKDETWWPDLKTP 733

Query: 61  EDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQED--DPDYEKFILNP 118
           +DL GI+TTM+W+ SG HAA+NFGQY + GY PNRPT+ R  +P ED  +  + +F+  P
Sbjct: 734 QDLIGIVTTMVWVTSGHHAAVNFGQYAYAGYFPNRPTIARTNLPSEDPTEEGWRRFLHKP 793

Query: 119 QHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDHEILQMFNKFSSR 178
           ++  L+ LPTQLQA KV+ V D LS+HSPDEEYLG+   L   W  D  I   F +FS R
Sbjct: 794 ENELLACLPTQLQAAKVLTVLDVLSSHSPDEEYLGE--HLEPAWGADPLIKAAFERFSGR 851

Query: 179 LEEIEQIINNRNKDPRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 228
           L+EIE II+ RN+D  LKNR+GAG+ PYELL P SG GVTG+G+P SISI
Sbjct: 852 LKEIEGIIDARNEDKNLKNRHGAGVVPYELLKPFSGAGVTGKGVPYSISI 901


>GSVIVT01016738001 assembled CDS
          Length = 927

 Score =  276 bits (705), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 130/226 (57%), Positives = 165/226 (73%), Gaps = 1/226 (0%)

Query: 1   DGLLIWSAIKEWVESYVNHFYSEHKSVTSDVELQVWWDEIRNKGHYDKRNEPWWPELNTK 60
           DGLLIW AI+ WV++YV H+Y     V SD ELQ W+ E  N GH D R+  WWP L+T 
Sbjct: 690 DGLLIWRAIENWVKTYVAHYYPSPSVVISDRELQAWYSEAVNVGHADLRHAAWWPSLSTP 749

Query: 61  EDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQEDDPDYEKFILNPQH 120
           +DL+ ILTT+IW+AS QHAA+NFGQYP+GGYVPNRP LMR+LIP+  DP+Y  F+ +PQ 
Sbjct: 750 DDLASILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPEPTDPEYTNFLNDPQR 809

Query: 121 TFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDHEILQMFNKFSSRLE 180
            +LS+LP  LQ+T  MAV DTLSTHSPDEEY+G+ N   S W  D EI++   +FS+ + 
Sbjct: 810 YYLSALPGVLQSTSFMAVVDTLSTHSPDEEYIGERNH-PSTWSGDAEIIEASYEFSAEIR 868

Query: 181 EIEQIINNRNKDPRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSI 226
            IE+ I  RN +   +NR GAG+ PYELL P+SGPGVT RGIPN++
Sbjct: 869 RIEKEIEKRNAEFSRRNRCGAGVLPYELLAPSSGPGVTCRGIPNTL 914


>GSVIVT01025340001 assembled CDS
          Length = 872

 Score =  265 bits (676), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 124/230 (53%), Positives = 163/230 (70%), Gaps = 4/230 (1%)

Query: 1   DGLLIWSAIKEWVESYVNHFYSEHKSVTSDVELQVWWDEIRNKGHYDKRNEPWWPELNTK 60
           DGL++W A+K+WV  YVN++Y +   V SD ELQ WW EIR KGH DK++EPWWP L T 
Sbjct: 645 DGLILWDALKQWVADYVNYYYKDASMVQSDPELQAWWTEIRTKGHEDKKDEPWWPVLKTP 704

Query: 61  EDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQED--DPDYEKFILNP 118
           EDL GI+TT++W+AS   +A+NFGQY F GY PNRPT+ R  +P ED     +++F+ NP
Sbjct: 705 EDLIGIITTIVWVASAHDSAVNFGQYAFAGYFPNRPTIARTNMPSEDPTREGWKRFLDNP 764

Query: 119 QHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDHEILQMFNKFSSR 178
           +   L   P+Q+QATKVMA+ D LS HSPDEEYLG+   +   W  +  I + F +FS++
Sbjct: 765 EFELLVCFPSQIQATKVMAILDVLSNHSPDEEYLGE--HMEPAWGEEPVIKEAFERFSAK 822

Query: 179 LEEIEQIINNRNKDPRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 228
           L+E+  II++RN D  LKNR GAG+ PYELL P S  GVTG+G+P SISI
Sbjct: 823 LKELGVIIDSRNADDSLKNRGGAGVVPYELLKPFSEAGVTGKGVPYSISI 872


>GSVIVT01025341001 assembled CDS
          Length = 2408

 Score =  262 bits (670), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 123/230 (53%), Positives = 161/230 (70%), Gaps = 4/230 (1%)

Query: 1    DGLLIWSAIKEWVESYVNHFYSEHKSVTSDVELQVWWDEIRNKGHYDKRNEPWWPELNTK 60
            DGL++W A+K+WV  YVN++Y +   V SD ELQ WW EIR KGH DK++EPWWP L T 
Sbjct: 2181 DGLILWDALKQWVADYVNYYYKDASMVQSDPELQAWWTEIRTKGHEDKKDEPWWPVLQTP 2240

Query: 61   EDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQED--DPDYEKFILNP 118
            EDL GI+ T+ W+AS  H+A+NFGQY F  Y PNRPT+ R  +P ED     +++F+ NP
Sbjct: 2241 EDLIGIIATIAWVASAHHSAVNFGQYAFAAYFPNRPTIARTNMPSEDPTREGWKRFLDNP 2300

Query: 119  QHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDHEILQMFNKFSSR 178
                L   P+Q+QATKV+A+ D LS HSPDEEY+G+   +   W  + +I + F +FS+R
Sbjct: 2301 HFELLVCFPSQVQATKVIAILDVLSNHSPDEEYIGEY--MEPAWGEEPDIKEAFERFSAR 2358

Query: 179  LEEIEQIINNRNKDPRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 228
            L+E+E II+ RN D  LKNR GAG+ PYELL P S  GVTG+G+P SISI
Sbjct: 2359 LKELEVIIDARNADNSLKNRGGAGVVPYELLKPFSEAGVTGKGVPYSISI 2408



 Score =  126 bits (317), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 90/179 (50%), Gaps = 41/179 (22%)

Query: 1    DGLLIWSAIKEWVESYVNHFYSEHKSVTSDVELQVWWDEIRNKGHYDKRNEPWWPELNTK 60
            DGL++W A+K+WV  YVN++Y     V SD ELQ WW EIR K                 
Sbjct: 1354 DGLVLWDALKQWVADYVNYYYKNASMVQSDPELQAWWTEIRTK----------------- 1396

Query: 61   EDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQEDDPDYEKFILNPQH 120
                               A+NFGQY F GY PNRPT+ R  +P ED P  E++   P  
Sbjct: 1397 -------------------AVNFGQYAFAGYFPNRPTIARINMPCED-PTKEEWKQYPDS 1436

Query: 121  TFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDH----EILQMFNKF 175
              L   P+Q+QATKVMA+ D LS HSPDEEYLG+     +H I       E+L    KF
Sbjct: 1437 ELLVCFPSQIQATKVMAILDVLSNHSPDEEYLGKHMDCWNHDIGRKWGHPEVLAQLEKF 1495



 Score =  100 bits (248), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 56/77 (72%)

Query: 1   DGLLIWSAIKEWVESYVNHFYSEHKSVTSDVELQVWWDEIRNKGHYDKRNEPWWPELNTK 60
           DGL++W A+K+WV  YVN++Y +   V SD ELQ WW EI+ KGH DK++EPWWP L T 
Sbjct: 615 DGLVLWDALKQWVADYVNYYYKDANMVQSDPELQAWWTEIQTKGHEDKKDEPWWPNLQTP 674

Query: 61  EDLSGILTTMIWIASGQ 77
            DL GI+TT+ W +S +
Sbjct: 675 NDLIGIITTITWHSSDE 691



 Score = 77.4 bits (189), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 55/75 (73%), Gaps = 2/75 (2%)

Query: 135 VMAVQDTLSTHSPDEEYLGQVNQLHSHWINDHEILQMFNKFSSRLEEIEQIINNRNKDPR 194
           ++ +  T++ HS DEEYLG+  +L   W  +  I + FN+FS++LEE+E+ I++RNKD  
Sbjct: 677 LIGIITTITWHSSDEEYLGKDRKLT--WDEEPVIKEAFNRFSAKLEELERTIDDRNKDNS 734

Query: 195 LKNRNGAGIPPYELL 209
           LKNRNGAG+ PYELL
Sbjct: 735 LKNRNGAGVVPYELL 749


>GSVIVT01025342001 assembled CDS
          Length = 817

 Score =  242 bits (618), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 111/211 (52%), Positives = 153/211 (72%), Gaps = 4/211 (1%)

Query: 1   DGLLIWSAIKEWVESYVNHFYSEHKSVTSDVELQVWWDEIRNKGHYDKRNEPWWPELNTK 60
           DGL++W A+K+WV  YVN++Y +   V SD ELQ WW EIR KGH DK++EPWWP L T 
Sbjct: 585 DGLILWDALKQWVADYVNYYYKDASMVQSDPELQAWWTEIRTKGHEDKKDEPWWPNLQTP 644

Query: 61  EDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQED--DPDYEKFILNP 118
           +DL GI+TT+ W+ SG H+A+NFGQY F GY PNRP++ R  +P E+  +  +++F+ NP
Sbjct: 645 DDLIGIITTITWVTSGHHSAVNFGQYAFAGYFPNRPSIARTNMPCEEPTEEGWQRFLDNP 704

Query: 119 QHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDHEILQMFNKFSSR 178
               L+  P++LQAT++MA  D LS HS DEEY+G+  +L   W  +  I + FN+FS++
Sbjct: 705 NSELLACFPSKLQATRIMATLDLLSEHSSDEEYIGKDRKL--TWDEEPVIKEAFNRFSAK 762

Query: 179 LEEIEQIINNRNKDPRLKNRNGAGIPPYELL 209
           LEE+E+ I++RNKD  LKNRNGAG+ PYELL
Sbjct: 763 LEELERTIDDRNKDNSLKNRNGAGVVPYELL 793


>GSVIVT01000084001 assembled CDS
          Length = 900

 Score =  231 bits (588), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 110/228 (48%), Positives = 151/228 (66%), Gaps = 2/228 (0%)

Query: 1   DGLLIWSAIKEWVESYVNHFYSEHKSVTSDVELQVWWDEIRNKGHYDKRNEPWWPELNTK 60
           DGL IWSAI+ WV+ Y + +Y   + V  D ELQ WW E+R +GH DK++EPWWP+++T 
Sbjct: 675 DGLEIWSAIETWVKEYCSFYYKTDEMVQKDSELQSWWKEVREEGHGDKKDEPWWPKMHTV 734

Query: 61  EDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQEDDPDYEKFILNPQH 120
           ++L    T +IW+AS  HAA+NFGQYP+ GY+PNRPT+ R+ +P+E  P+YE+   NP  
Sbjct: 735 KELIETCTIIIWVASALHAAVNFGQYPYAGYLPNRPTISRRFMPEEGTPEYEELKSNPDK 794

Query: 121 TFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDHEILQMFNKFSSRLE 180
            FL ++  QLQ    +++ + LS HS DE YLGQ +     W  D   L+ F KF  +L 
Sbjct: 795 AFLKTITAQLQTLLGISLIEILSRHSSDEVYLGQRDT--PEWTLDTTPLKAFEKFGRKLA 852

Query: 181 EIEQIINNRNKDPRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 228
           +IE+ I +RN + R KNR G    PY LL PTS  G+TG+GIPNS+SI
Sbjct: 853 DIEERIIDRNGNERFKNRVGPVKIPYTLLYPTSEGGLTGKGIPNSVSI 900


>GSVIVT01005215001 assembled CDS
          Length = 533

 Score =  201 bits (511), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 104/228 (45%), Positives = 139/228 (60%), Gaps = 44/228 (19%)

Query: 1   DGLLIWSAIKEWVESYVNHFYSEHKSVTSDVELQVWWDEIRNKGHYDKRNEPWWPELNTK 60
           DGLLIWS+I+  V++YVN++YS+ + + SD ELQ W++E R+                  
Sbjct: 350 DGLLIWSSIESLVQTYVNYYYSDAEMIESDTELQAWYNESRS------------------ 391

Query: 61  EDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQEDDPDYEKFILNPQH 120
                                    YP+GG++P RP LMR+L+P+E DP Y  FI +PQ 
Sbjct: 392 -------------------------YPYGGFIPARPPLMRQLVPKEHDPVYVDFIEDPQA 426

Query: 121 TFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDHEILQMFNKFSSRLE 180
            FLSSLP+ LQATK MAV + +S HSPDEEYLG+   L S W  D EI++ F +FS  + 
Sbjct: 427 YFLSSLPSLLQATKFMAVIEIISAHSPDEEYLGERKDL-STWSGDTEIIEAFYRFSVEIR 485

Query: 181 EIEQIINNRNKDPRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 228
            IE+ I  RN D   +NR GAGI PY+LL+P+SGPGVT +GIPNSI++
Sbjct: 486 RIEKEIEKRNADTSRRNRCGAGISPYKLLIPSSGPGVTSKGIPNSITV 533


>GSVIVT01032029001 assembled CDS
          Length = 866

 Score =  154 bits (390), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 67/125 (53%), Positives = 89/125 (71%), Gaps = 2/125 (1%)

Query: 1   DGLLIWSAIKEWVESYVNHFYSEHKSVTSDVELQVWWDEIRNKGHYDKRNEPWWPELNTK 60
           DGL++W AIK+WV  YVNH+Y +   V SD ELQ WW E+R KGH DK++EPWWP + T 
Sbjct: 702 DGLVLWDAIKQWVRDYVNHYYPDPSLVESDKELQGWWTEVRTKGHADKKDEPWWPVMKTP 761

Query: 61  EDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQED--DPDYEKFILNP 118
           EDL  +LTT+IW+ +G HAA+NFGQY + GY PNRPT+ R  +P ED  D +++ F+  P
Sbjct: 762 EDLIHVLTTIIWVTAGHHAAVNFGQYVYAGYFPNRPTIARTNMPTEDPSDEEFKNFLHKP 821

Query: 119 QHTFL 123
           +   L
Sbjct: 822 EIALL 826


>GSVIVT01017943001 assembled CDS
          Length = 751

 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 49/88 (55%), Gaps = 2/88 (2%)

Query: 117 NPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDHEILQMFNKFS 176
           NP   FL ++  QLQ    +++ + LS HS DE YLGQ +     W +D E L  F +F 
Sbjct: 661 NPDLAFLKTITAQLQTLLGVSLIEILSRHSTDEIYLGQRDT--PEWTSDAEPLAAFERFG 718

Query: 177 SRLEEIEQIINNRNKDPRLKNRNGAGIP 204
           SRL  IE  IN  N+D R  NR G GIP
Sbjct: 719 SRLRGIETRINQMNQDRRWNNRFGPGIP 746


>GSVIVT01000083001 assembled CDS
          Length = 738

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 34/49 (69%)

Query: 37  WDEIRNKGHYDKRNEPWWPELNTKEDLSGILTTMIWIASGQHAAINFGQ 85
           W  I   GH DK++EPWWP++ T ++L    T +IW+AS  HAA+NFGQ
Sbjct: 639 WSAIETWGHGDKKDEPWWPKMRTVKELIETCTIIIWVASALHAAVNFGQ 687



 Score = 60.1 bits (144), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 29/54 (53%), Positives = 38/54 (70%)

Query: 175 FSSRLEEIEQIINNRNKDPRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 228
           F  +L +IE++I +RN + R KNR G    PY LL PTS  G+TG+GIPNS+SI
Sbjct: 685 FGQKLADIEEMIIDRNGNERFKNRVGPVKIPYTLLYPTSEGGLTGKGIPNSVSI 738