Jatropha Genome Database
- JcCA0155031.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0155031.20 + phase: 0
(245 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01016887001 assembled CDS 114 3e-26
GSVIVT01021086001 assembled CDS 112 1e-25
GSVIVT01027184001 assembled CDS 109 2e-24
GSVIVT01019619001 assembled CDS 108 2e-24
GSVIVT01038591001 assembled CDS 107 5e-24
GSVIVT01007758001 assembled CDS 107 6e-24
GSVIVT01008156001 assembled CDS 107 7e-24
GSVIVT01005057001 assembled CDS 106 1e-23
GSVIVT01025119001 assembled CDS 106 1e-23
GSVIVT01016538001 assembled CDS 105 2e-23
GSVIVT01021085001 assembled CDS 105 2e-23
GSVIVT01007992001 assembled CDS 104 4e-23
GSVIVT01019969001 assembled CDS 103 5e-23
GSVIVT01011433001 assembled CDS 103 5e-23
GSVIVT01034189001 assembled CDS 103 9e-23
GSVIVT01003947001 assembled CDS 103 9e-23
GSVIVT01002242001 assembled CDS 103 9e-23
GSVIVT01029943001 assembled CDS 102 1e-22
GSVIVT01011138001 assembled CDS 102 2e-22
GSVIVT01024986001 assembled CDS 102 2e-22
GSVIVT01021212001 assembled CDS 101 4e-22
GSVIVT01031841001 assembled CDS 96 1e-20
>GSVIVT01016887001 assembled CDS
Length = 239
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/72 (75%), Positives = 57/72 (79%), Gaps = 4/72 (5%)
Query: 13 SQLQPPKLAEP----LPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWTHGGTLRNVP 68
S QP K P L CPRC STNTKFCYYNNYNLSQPRHFCK CRRYWT GG LRN+P
Sbjct: 5 STFQPMKTHFPEQEHLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIP 64
Query: 69 VGGGTRKNSKRS 80
VGGG+RKN+KRS
Sbjct: 65 VGGGSRKNTKRS 76
>GSVIVT01021086001 assembled CDS
Length = 372
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 56/71 (78%)
Query: 12 RSQLQPPKLAEPLPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWTHGGTLRNVPVGG 71
R +P + + L CPRC S+NTKFCYYNNY+LSQPRHFCK C+RYWT GGTLRNVPVGG
Sbjct: 98 RVMEKPGQEQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGG 157
Query: 72 GTRKNSKRSRP 82
G RKN + RP
Sbjct: 158 GCRKNKRVKRP 168
>GSVIVT01027184001 assembled CDS
Length = 297
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
Query: 9 RPARSQLQPPKLAEPLPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWTHGGTLRNVP 68
+P + P+ + + CPRCSSTNTKFCYYNNY+L+QPR+FCK CRRYWT GGTLRNVP
Sbjct: 30 KPVLERKARPQKDQAVNCPRCSSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNVP 89
Query: 69 VGGGTRKNSKRS 80
VGGG+RKN KRS
Sbjct: 90 VGGGSRKN-KRS 100
>GSVIVT01019619001 assembled CDS
Length = 142
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 58/70 (82%)
Query: 9 RPARSQLQPPKLAEPLPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWTHGGTLRNVP 68
+PA + P+ + L CPRC+STNTKFCYYNNY+LSQPR+FCK CRRYWT GG+LRN+P
Sbjct: 25 KPALEKRARPQKEQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNIP 84
Query: 69 VGGGTRKNSK 78
VGGG+RKN +
Sbjct: 85 VGGGSRKNKR 94
>GSVIVT01038591001 assembled CDS
Length = 245
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 56/69 (81%)
Query: 10 PARSQLQPPKLAEPLPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWTHGGTLRNVPV 69
P + P+ + L CPRC+STNTKFCYYNNY+LSQPR+FCK CRRYWT GG+LRNVPV
Sbjct: 21 PVAERRARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPV 80
Query: 70 GGGTRKNSK 78
GGG+RKN +
Sbjct: 81 GGGSRKNKR 89
>GSVIVT01007758001 assembled CDS
Length = 318
Score = 107 bits (266), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 59/80 (73%), Gaps = 4/80 (5%)
Query: 3 SESGD----KRPARSQLQPPKLAEPLPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYW 58
S SGD RP + P+ + L CPRC ST+TKFCYYNNY+LSQPR+FCK CRRYW
Sbjct: 30 SPSGDMLTCSRPLIERRLRPQHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYW 89
Query: 59 THGGTLRNVPVGGGTRKNSK 78
T GGTLRN+PVGGG RKN K
Sbjct: 90 TKGGTLRNIPVGGGCRKNKK 109
>GSVIVT01008156001 assembled CDS
Length = 255
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 49/64 (76%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Query: 18 PKLAEPLPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWTHGGTLRNVPVGGGTRKNS 77
P + L CPRC S NTKFCYYNNYNLSQPRHFCK CRRYWT GG LRNVPVGGG RK +
Sbjct: 23 PHQNQALKCPRCESLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRK-T 81
Query: 78 KRSR 81
KRS+
Sbjct: 82 KRSK 85
>GSVIVT01005057001 assembled CDS
Length = 425
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 49/59 (83%)
Query: 22 EPLPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWTHGGTLRNVPVGGGTRKNSKRS 80
E L CPRC S+NTKFCYYNNYNL+QPRHFCK CRRYWT GG LRNVP+GGG RKN S
Sbjct: 135 ENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTS 193
>GSVIVT01025119001 assembled CDS
Length = 272
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 55/68 (80%)
Query: 11 ARSQLQPPKLAEPLPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWTHGGTLRNVPVG 70
A+ + +P + L CPRC STNTKFCYYNNY+LSQPR+FCK CRRYWT GGTLRNVPVG
Sbjct: 25 AQQERKPRPPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVG 84
Query: 71 GGTRKNSK 78
GG RKN +
Sbjct: 85 GGCRKNKR 92
>GSVIVT01016538001 assembled CDS
Length = 337
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Query: 18 PKLAEPLPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWTHGGTLRNVPVGGGTRKNS 77
P+ L CPRC STNTKFCY+NNY+LSQPRHFCK CRRYWT GG LRNVPVGGG R+N
Sbjct: 70 PQPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRN- 128
Query: 78 KRSR 81
KRS+
Sbjct: 129 KRSK 132
>GSVIVT01021085001 assembled CDS
Length = 299
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 57/71 (80%), Gaps = 2/71 (2%)
Query: 9 RPARSQLQPPKLAEPLPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWTHGGTLRNVP 68
+PA+S+ Q +L P CPRC S NTKFCYYNNY+LSQPR+FCK CRRYWT GGTLRNVP
Sbjct: 22 KPAQSENQQQQL--PQKCPRCDSINTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVP 79
Query: 69 VGGGTRKNSKR 79
VGGG RK ++
Sbjct: 80 VGGGCRKTKRK 90
>GSVIVT01007992001 assembled CDS
Length = 367
Score = 104 bits (259), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 48/53 (90%)
Query: 24 LPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWTHGGTLRNVPVGGGTRKN 76
LPCPRC+S +TKFCYYNNYN++QPRHFCK C+RYWT GGT+RNVPVG G RKN
Sbjct: 121 LPCPRCNSMDTKFCYYNNYNINQPRHFCKSCQRYWTAGGTMRNVPVGAGRRKN 173
>GSVIVT01019969001 assembled CDS
Length = 370
Score = 103 bits (258), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 43/57 (75%), Positives = 49/57 (85%)
Query: 24 LPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWTHGGTLRNVPVGGGTRKNSKRS 80
LPCPRC+S +TKFCYYNNYN++QPRHFCK C+RYWT GGT+RNVPVG G RKN S
Sbjct: 125 LPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSS 181
>GSVIVT01011433001 assembled CDS
Length = 401
Score = 103 bits (258), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 48/53 (90%)
Query: 24 LPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWTHGGTLRNVPVGGGTRKN 76
LPCPRC+S +TKFCYYNNYN++QPRHFCK C+RYWT GGT+RNVPVG G RKN
Sbjct: 146 LPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKN 198
>GSVIVT01034189001 assembled CDS
Length = 323
Score = 103 bits (256), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 58/79 (73%), Gaps = 5/79 (6%)
Query: 5 SGDKRPA----RSQLQPPKLAEP-LPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWT 59
+G RP R++L L E L CPRC STNTKFCY+NNY+LSQPRHFCK CRRYWT
Sbjct: 48 TGSIRPGSMADRARLANIPLPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWT 107
Query: 60 HGGTLRNVPVGGGTRKNSK 78
GG LRNVPVGGG R+N +
Sbjct: 108 RGGALRNVPVGGGCRRNKR 126
>GSVIVT01003947001 assembled CDS
Length = 362
Score = 103 bits (256), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 47/55 (85%)
Query: 24 LPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWTHGGTLRNVPVGGGTRKNSK 78
L CPRC S NTKFCYYNNY+L+QPRHFCK CRRYWT GG LRNVP+GGG RKN K
Sbjct: 120 LKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKK 174
>GSVIVT01002242001 assembled CDS
Length = 240
Score = 103 bits (256), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
Query: 22 EPLPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWTHGGTLRNVPVGGGTRKNSK 78
EPL CPRC STNTKFCY+NNYN SQPRHFCK C+R+WT GGTLRNVPVGGG RKN +
Sbjct: 14 EPLKCPRCDSTNTKFCYFNNYNKSQPRHFCKSCKRHWTKGGTLRNVPVGGG-RKNKR 69
>GSVIVT01029943001 assembled CDS
Length = 465
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 47/53 (88%)
Query: 24 LPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWTHGGTLRNVPVGGGTRKN 76
LPCPRC+S TKFCY+NNYN++QPRHFCK C+RYWT GGT+RNVPVG G RKN
Sbjct: 103 LPCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKN 155
>GSVIVT01011138001 assembled CDS
Length = 270
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 49/53 (92%)
Query: 26 CPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWTHGGTLRNVPVGGGTRKNSK 78
CPRC S+NTKFCYYNNY+L+QPR+FCKGCRRYWT GG+LRNVPVGGG RKN +
Sbjct: 16 CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRR 68
>GSVIVT01024986001 assembled CDS
Length = 227
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 49/59 (83%)
Query: 18 PKLAEPLPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWTHGGTLRNVPVGGGTRKN 76
P+ L CPRC STNTKFCY+NNY+L+QPRHFCK CRRYWT GG LRNVPVGGG R+N
Sbjct: 60 PQPETALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRN 118
>GSVIVT01021212001 assembled CDS
Length = 173
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
Query: 1 MPSESGDKRPARSQLQPPKLAEPLPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWTH 60
+ E+ +K + + +P K+ +PCPRC S TKFCY+NNYN++QPRHFCKGC+RYWT
Sbjct: 42 VKEEANNKGDHKEEKRPEKI---IPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTA 98
Query: 61 GGTLRNVPVGGGTRKN 76
GG LRNVPVG G RK+
Sbjct: 99 GGALRNVPVGAGRRKS 114
>GSVIVT01031841001 assembled CDS
Length = 173
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 1 MPSESGDKRPARSQLQPPKLAEPLPCPRCSSTNTKFCYYNNYNLSQPRHFCKGCRRYWTH 60
M SE G+ + PP+ L CPRC+STNTKFCYYNNYNLSQPRHFCK CRRYWTH
Sbjct: 1 MQSEPGNHQRPTGPPPPPENHHHLQCPRCNSTNTKFCYYNNYNLSQPRHFCKSCRRYWTH 60
Query: 61 GGTLRNVPVGGGTRKNSK-RSRP 82
GG LR++P K S+ RS P
Sbjct: 61 GGALRDIPARDNAPKRSRSRSSP 83