Jatropha Genome Database
- JcCA0154801.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0154801.10 + phase: 0
(198 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01008241001 assembled CDS 147 4e-36
GSVIVT01024794001 assembled CDS 107 3e-24
GSVIVT01034001001 assembled CDS 103 6e-23
GSVIVT01036090001 assembled CDS 102 1e-22
GSVIVT01016370001 assembled CDS 97 5e-21
GSVIVT01013684001 assembled CDS 95 2e-20
GSVIVT01014754001 assembled CDS 94 5e-20
GSVIVT01001237001 assembled CDS 92 1e-19
GSVIVT01035363001 assembled CDS 91 5e-19
GSVIVT01015223001 assembled CDS 90 5e-19
GSVIVT01005816001 assembled CDS 89 1e-18
GSVIVT01014756001 assembled CDS 86 9e-18
GSVIVT01016996001 assembled CDS 86 1e-17
GSVIVT01020132001 assembled CDS 81 3e-16
GSVIVT01013871001 assembled CDS 79 1e-15
GSVIVT01007843001 assembled CDS 74 5e-14
GSVIVT01022310001 assembled CDS 65 2e-11
>GSVIVT01008241001 assembled CDS
Length = 252
Score = 147 bits (370), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 89/148 (60%), Gaps = 7/148 (4%)
Query: 18 LKFDDCKGTLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 77
+ + + + LFLLGLDK+GKGDWRSISRNFV++RTPTQVASHAQKYFIRLNSMN+DRRRS
Sbjct: 86 IPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRS 145
Query: 78 SIHDITSVGNGDISAPQGPITGQTNXXXXXXXXXXXXXQPPQHXXXXXXXXXXX------ 131
SIHDITSV NGD+S PQ PITGQ P +H
Sbjct: 146 SIHDITSVNNGDVSTPQAPITGQQGNGNPASAAAAGVGPPLKHHRAQPSMPAGALGMYGT 205
Query: 132 -XXXXXXXXXXXLVSAVGTPVNLPAPAH 158
+ SAVGTPV LP H
Sbjct: 206 PMGHPVAAPPGHMASAVGTPVMLPPGPH 233
>GSVIVT01024794001 assembled CDS
Length = 215
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/67 (77%), Positives = 56/67 (83%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVG 86
LFLLGL KYGKGDWR+ISRNFVVTRTPTQVASHAQKYFIR S KD+RR+SIHDIT+V
Sbjct: 66 LFLLGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVN 125
Query: 87 NGDISAP 93
D P
Sbjct: 126 LTDTRTP 132
>GSVIVT01034001001 assembled CDS
Length = 211
Score = 103 bits (257), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 53/58 (91%)
Query: 28 FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSV 85
FL+GL KYGKGDWR+ISRNFV TRTPTQVASHAQKYFIR S+ KD+RRSSIHDIT+V
Sbjct: 144 FLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLSVGKDKRRSSIHDITTV 201
>GSVIVT01036090001 assembled CDS
Length = 225
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 54/59 (91%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSV 85
LFL+GL +YGKGDWRSISRN VV+RTPTQVASHAQKYF+RL S KD++RSSIHDIT+V
Sbjct: 122 LFLIGLQRYGKGDWRSISRNAVVSRTPTQVASHAQKYFMRLTSGKKDKKRSSIHDITTV 180
>GSVIVT01016370001 assembled CDS
Length = 231
Score = 97.1 bits (240), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 55/67 (82%)
Query: 28 FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVGN 87
FL+GL K+GKGDWR+ISRNFVV++TPTQVASHAQKYF R S KD+RR SIHDIT+V
Sbjct: 81 FLMGLIKHGKGDWRNISRNFVVSKTPTQVASHAQKYFARQLSGGKDKRRPSIHDITTVNL 140
Query: 88 GDISAPQ 94
D + P+
Sbjct: 141 TDTTPPE 147
>GSVIVT01013684001 assembled CDS
Length = 195
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%)
Query: 22 DCKGTLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHD 81
+ + LFL GL ++GKGDWRSISR+ V+TRTPTQVASHAQK+++R NS+ K+R+RSSIHD
Sbjct: 82 EVEHRLFLSGLVRFGKGDWRSISRHVVITRTPTQVASHAQKFYLRQNSVKKERKRSSIHD 141
Query: 82 ITSVGN 87
I ++ N
Sbjct: 142 INTIEN 147
>GSVIVT01014754001 assembled CDS
Length = 182
Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 66/94 (70%), Gaps = 9/94 (9%)
Query: 10 SIDFLFQRLK---FDDCKGTLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIR 66
+IDF ++ K + + + LFL GL KYGKGDW+SISRNFV+TRTP+QVASHAQKYF R
Sbjct: 92 AIDFGIEKKKGTPWTEEEHVLFLEGLVKYGKGDWKSISRNFVITRTPSQVASHAQKYFAR 151
Query: 67 L--NSMNKDRRRSSIHDITSVGNGDISAPQGPIT 98
+M K R+R+SIHDIT+ D P G +T
Sbjct: 152 QRPGNMGKKRKRTSIHDITT----DDLPPLGGVT 181
>GSVIVT01001237001 assembled CDS
Length = 156
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 60/79 (75%), Gaps = 5/79 (6%)
Query: 11 IDFLFQRLK---FDDCKGTLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRL 67
IDF ++ K + + + LFL GL KYGKGDW+SISRNFV+TRTP+QVASHAQKYF R
Sbjct: 67 IDFGIEKKKGTPWIEEEHVLFLEGLVKYGKGDWKSISRNFVITRTPSQVASHAQKYFARQ 126
Query: 68 --NSMNKDRRRSSIHDITS 84
+M K R+R+SIHDIT+
Sbjct: 127 RPGNMGKKRKRTSIHDITT 145
>GSVIVT01035363001 assembled CDS
Length = 211
Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 48/55 (87%)
Query: 28 FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDI 82
FLLGL+K G+GDWR ISRNFV TRTPTQVASHAQKYF+R +S+NK +RR S+ D+
Sbjct: 116 FLLGLEKLGRGDWRGISRNFVTTRTPTQVASHAQKYFLRQSSLNKKKRRPSLFDL 170
>GSVIVT01015223001 assembled CDS
Length = 297
Score = 90.1 bits (222), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 53/65 (81%), Gaps = 2/65 (3%)
Query: 28 FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVGN 87
FL GL+K GKGDWR ISRNFV TRTPTQVASHAQKYF+R +++K +RRSS+ D+ VGN
Sbjct: 112 FLAGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRQATLSKKKRRSSLFDM--VGN 169
Query: 88 GDISA 92
+++
Sbjct: 170 SNMAG 174
>GSVIVT01005816001 assembled CDS
Length = 324
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 50/58 (86%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITS 84
+FLLGL K GKGDWR ISRN+V++RTPTQVASHAQKYFIR ++++ +RRSS+ DI +
Sbjct: 97 MFLLGLQKLGKGDWRGISRNYVISRTPTQVASHAQKYFIRQTNVSRRKRRSSLFDIVA 154
>GSVIVT01014756001 assembled CDS
Length = 160
Score = 86.3 bits (212), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 54/72 (75%), Gaps = 5/72 (6%)
Query: 26 TLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMN--KDRRRSSIHDIT 83
T FL GL K+GKGDW++ISR+ V TRTPTQVASHAQKYF R S N K R+RSSIHDIT
Sbjct: 88 TWFLQGLLKFGKGDWKNISRHCVTTRTPTQVASHAQKYFARQKSGNAEKRRKRSSIHDIT 147
Query: 84 SVGNGDISAPQG 95
+ D+ +P G
Sbjct: 148 T---SDLHSPHG 156
>GSVIVT01016996001 assembled CDS
Length = 358
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 57/79 (72%), Gaps = 3/79 (3%)
Query: 7 SCCSIDFLFQRLK---FDDCKGTLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 63
+ CS + +R K + + + LFL GL + GKGDWR ISRN+V++RTPTQVASHAQKY
Sbjct: 98 ATCSSNRRGERKKGVPWTEEEHRLFLFGLQRLGKGDWRGISRNYVISRTPTQVASHAQKY 157
Query: 64 FIRLNSMNKDRRRSSIHDI 82
FIR ++ + +RRSS+ D+
Sbjct: 158 FIRQSNATRRKRRSSLFDM 176
>GSVIVT01020132001 assembled CDS
Length = 300
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 50/58 (86%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITS 84
LFLLGL K GKGDWR ISRNFV TRTPTQVASHAQKYF+R N+ N+ RRRSS+ DIT+
Sbjct: 95 LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNHNRRRRRSSLFDITA 152
>GSVIVT01013871001 assembled CDS
Length = 185
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 44/55 (80%)
Query: 28 FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDI 82
FL GL+K GKGDWR I++ FV TRTPTQVASHAQKYF+R + +K +RR S+ D+
Sbjct: 114 FLAGLEKLGKGDWRGIAKKFVTTRTPTQVASHAQKYFLRRAACDKRKRRPSLFDM 168
>GSVIVT01007843001 assembled CDS
Length = 258
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/38 (86%), Positives = 34/38 (89%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYF 64
LFL+GL K GKGDWR ISRNFV TRTPTQVASHAQKYF
Sbjct: 89 LFLVGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYF 126
>GSVIVT01022310001 assembled CDS
Length = 221
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 45/59 (76%), Gaps = 3/59 (5%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIR---LNSMNKDRRRSSIHDI 82
LFL+GL +GKGDWR+I R+ V+T++PTQVASHAQKYF R S + RRR SIHDI
Sbjct: 122 LFLVGLIAFGKGDWRNILRHCVITKSPTQVASHAQKYFKRHSSSASSSARRRRCSIHDI 180