Jatropha Genome Database

JcCA0154731.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154731.10 - phase: 0 /partial
         (211 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01009858001 assembled CDS                                       206   9e-54
GSVIVT01027429001 assembled CDS                                        71   3e-13
GSVIVT01018029001 assembled CDS                                        69   2e-12
GSVIVT01038630001 assembled CDS                                        68   3e-12
GSVIVT01019668001 assembled CDS                                        67   4e-12
GSVIVT01011360001 assembled CDS                                        67   4e-12
GSVIVT01037598001 assembled CDS                                        66   1e-11
GSVIVT01035382001 assembled CDS                                        63   8e-11
GSVIVT01038556001 assembled CDS                                        62   2e-10
GSVIVT01010604001 assembled CDS                                        62   2e-10
GSVIVT01020054001 assembled CDS                                        62   2e-10
GSVIVT01008043001 assembled CDS                                        61   3e-10
GSVIVT01000865001 assembled CDS                                        60   1e-09
GSVIVT01019823001 assembled CDS                                        60   1e-09
GSVIVT01015291001 assembled CDS                                        59   2e-09
GSVIVT01016967001 assembled CDS                                        55   2e-08
GSVIVT01021830001 assembled CDS                                        53   1e-07
GSVIVT01033548001 assembled CDS                                        52   2e-07
GSVIVT01025635001 assembled CDS                                        48   3e-06
GSVIVT01002333001 assembled CDS                                        47   4e-06
GSVIVT01016320001 assembled CDS                                        47   6e-06

>GSVIVT01009858001 assembled CDS
          Length = 502

 Score =  206 bits (523), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 102/151 (67%), Positives = 124/151 (82%), Gaps = 1/151 (0%)

Query: 29  KSSSDKRGWSFRKRSARHRVLSNTVITEAPFSANKESSESASLNFQLPDTTSVPEKISVI 88
           K  SDKRGWSFRKRSARHRVLSNTV++E P S NKES ESA++NFQ P  +++PEK SV 
Sbjct: 18  KGYSDKRGWSFRKRSARHRVLSNTVVSEIPSSGNKESPESAAINFQTPVDSTIPEKTSVP 77

Query: 89  QSTDEKPQL-TFADSKESETIVVTKDESEVEAPLEESIVVVIQAAVRGFLAQRELLKRKN 147
           Q  DEKPQL T  +SK SET+V +++ES+V+  ++ES  + IQAAVRGFLAQR LLK KN
Sbjct: 78  QWADEKPQLSTSFNSKASETVVASENESKVDVNVDESAAIAIQAAVRGFLAQRALLKLKN 137

Query: 148 LVKLQAVVRGHLVRQHAVGTLRCVQAIIKMQ 178
           ++KLQA VRGHLVR+HAVGTLR VQAI+K+Q
Sbjct: 138 VIKLQAAVRGHLVRRHAVGTLRVVQAIVKIQ 168


>GSVIVT01027429001 assembled CDS
          Length = 557

 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 45/72 (62%)

Query: 122 EESIVVVIQAAVRGFLAQRELLKRKNLVKLQAVVRGHLVRQHAVGTLRCVQAIIKMQXXX 181
           E    +VIQ A RG+LA+R L   K LVKLQA+VRGH VR+ A  TLRC+QA++++Q   
Sbjct: 136 ENYAAIVIQTAFRGYLAKRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARV 195

Query: 182 XXXXXXXXQEGS 193
                    EGS
Sbjct: 196 LDQRLRLSHEGS 207


>GSVIVT01018029001 assembled CDS
          Length = 430

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 43/58 (74%)

Query: 121 LEESIVVVIQAAVRGFLAQRELLKRKNLVKLQAVVRGHLVRQHAVGTLRCVQAIIKMQ 178
           +EE+  V IQAA R  LA++ L   K LVKLQA+VRG+LVR+ A  TLRC+QA++ +Q
Sbjct: 134 IEEAAAVKIQAAFRAHLARKALCALKGLVKLQALVRGNLVRKQATATLRCMQALVTVQ 191


>GSVIVT01038630001 assembled CDS
          Length = 426

 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 42/57 (73%)

Query: 122 EESIVVVIQAAVRGFLAQRELLKRKNLVKLQAVVRGHLVRQHAVGTLRCVQAIIKMQ 178
           E    +VIQ A RG+LA++ L   K LVKLQA+VRGH VR+ A  TLRC+QA++++Q
Sbjct: 94  EHCAAIVIQTAFRGYLARKALRALKGLVKLQALVRGHNVRKRAKKTLRCMQALVRVQ 150


>GSVIVT01019668001 assembled CDS
          Length = 473

 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 44/72 (61%)

Query: 122 EESIVVVIQAAVRGFLAQRELLKRKNLVKLQAVVRGHLVRQHAVGTLRCVQAIIKMQXXX 181
           E    VVIQ A RG+LA+  L   K LVKLQA+VRGH VR+ A  TL+C+QA++++Q   
Sbjct: 127 EHYAAVVIQTAFRGYLARTALRALKGLVKLQALVRGHNVRKQAKMTLKCMQALVRVQSRV 186

Query: 182 XXXXXXXXQEGS 193
                    EGS
Sbjct: 187 RDQRARLSHEGS 198


>GSVIVT01011360001 assembled CDS
          Length = 538

 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 29/49 (59%), Positives = 38/49 (77%)

Query: 130 QAAVRGFLAQRELLKRKNLVKLQAVVRGHLVRQHAVGTLRCVQAIIKMQ 178
           QAA RG+LA+R     K +++LQA+VRGHLVR+ AV TL CVQ I+K+Q
Sbjct: 117 QAAFRGYLARRAFRALKGIIRLQALVRGHLVRRQAVATLLCVQGIVKLQ 165


>GSVIVT01037598001 assembled CDS
          Length = 434

 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 37/53 (69%)

Query: 122 EESIVVVIQAAVRGFLAQRELLKRKNLVKLQAVVRGHLVRQHAVGTLRCVQAI 174
           EE     IQ A RGFLA+R L   K LV+LQA+VRGH VR+ A  TLRC+QA+
Sbjct: 96  EEWAATYIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQAL 148


>GSVIVT01035382001 assembled CDS
          Length = 404

 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 51/85 (60%)

Query: 122 EESIVVVIQAAVRGFLAQRELLKRKNLVKLQAVVRGHLVRQHAVGTLRCVQAIIKMQXXX 181
           +E   + IQ A RGFLA+R L   K +V+LQA+VRG  VR+ A  TLRC+QA++++Q   
Sbjct: 90  QEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARV 149

Query: 182 XXXXXXXXQEGSSTEKKIDGKHEKA 206
                    EG + +K +D +  +A
Sbjct: 150 RARRVRMSMEGQAVQKLLDERRSQA 174


>GSVIVT01038556001 assembled CDS
          Length = 478

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 38/53 (71%)

Query: 122 EESIVVVIQAAVRGFLAQRELLKRKNLVKLQAVVRGHLVRQHAVGTLRCVQAI 174
           E+    +IQ+  RG+LA+R L   K LV+LQA+VRGH VR+ A  T+RC+QA+
Sbjct: 129 EDRAATIIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQAL 181


>GSVIVT01010604001 assembled CDS
          Length = 333

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 46/79 (58%)

Query: 126 VVVIQAAVRGFLAQRELLKRKNLVKLQAVVRGHLVRQHAVGTLRCVQAIIKMQXXXXXXX 185
            V+IQ+A RG+LA+R L   K LVKLQA+VRGH+VR+ +   LR +QA+ ++Q       
Sbjct: 5   AVIIQSAFRGYLARRALKALKALVKLQALVRGHIVRKRSADMLRRMQALARVQARARVSR 64

Query: 186 XXXXQEGSSTEKKIDGKHE 204
                E S + ++    H 
Sbjct: 65  ARAILESSHSTRRFSLSHH 83


>GSVIVT01020054001 assembled CDS
          Length = 578

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 6/78 (7%)

Query: 104 ESETIV---VTKDESEVEAPLEESIVVVIQAAVRGFLAQRELLKRKNLVKLQAVVRGHLV 160
           ++ETI+   ++KD   +     E      QAA RG+LA+R     K +++LQA+ RG LV
Sbjct: 96  DTETIMNLGLSKDPERIR---HEQAATKAQAAFRGYLARRAFRTLKGIIRLQALGRGRLV 152

Query: 161 RQHAVGTLRCVQAIIKMQ 178
           R+ A+ TL CVQ I+K Q
Sbjct: 153 RRQAIATLCCVQGIVKFQ 170


>GSVIVT01008043001 assembled CDS
          Length = 542

 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 37/49 (75%)

Query: 130 QAAVRGFLAQRELLKRKNLVKLQAVVRGHLVRQHAVGTLRCVQAIIKMQ 178
           QAA RG+LA+R     K +++LQA++RGHLVR+ A+ TL C+  I+K+Q
Sbjct: 163 QAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAICTLYCMLGIVKIQ 211


>GSVIVT01000865001 assembled CDS
          Length = 354

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 39/53 (73%)

Query: 126 VVVIQAAVRGFLAQRELLKRKNLVKLQAVVRGHLVRQHAVGTLRCVQAIIKMQ 178
            + IQ A RG+LA++ L   K LV+LQA+VRG  VR+ A+ TL+C+Q+I+ +Q
Sbjct: 137 AIKIQTAFRGYLARKALRALKGLVRLQAIVRGRAVRRQAITTLKCLQSIVNIQ 189


>GSVIVT01019823001 assembled CDS
          Length = 465

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/54 (51%), Positives = 38/54 (70%)

Query: 122 EESIVVVIQAAVRGFLAQRELLKRKNLVKLQAVVRGHLVRQHAVGTLRCVQAII 175
           EE  V+ IQ+  RG+LA+R L   K LVKLQA+VRGH+VR+     LR +QA++
Sbjct: 129 EEWAVIKIQSLFRGYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQALV 182


>GSVIVT01015291001 assembled CDS
          Length = 435

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 38/57 (66%)

Query: 122 EESIVVVIQAAVRGFLAQRELLKRKNLVKLQAVVRGHLVRQHAVGTLRCVQAIIKMQ 178
           E    V IQ   RG+LA++ L   K LVKLQA+VRG+LVR+ A  TL  +QA+I+ Q
Sbjct: 122 ERWGAVKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLHGMQALIRAQ 178


>GSVIVT01016967001 assembled CDS
          Length = 1097

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 34/50 (68%)

Query: 129 IQAAVRGFLAQRELLKRKNLVKLQAVVRGHLVRQHAVGTLRCVQAIIKMQ 178
           IQ   RG+LA++     K LVKLQA+VRG LVR+ A  TL  +QA+I+ Q
Sbjct: 128 IQTVFRGYLARKAHRALKGLVKLQALVRGFLVRKRAAATLHSMQALIRAQ 177


>GSVIVT01021830001 assembled CDS
          Length = 391

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 38/58 (65%)

Query: 121 LEESIVVVIQAAVRGFLAQRELLKRKNLVKLQAVVRGHLVRQHAVGTLRCVQAIIKMQ 178
           +E +    IQA  R +LA++ L   + LVKLQA+VRGH VR+ A  TLR + A++ +Q
Sbjct: 109 VEHAAATKIQAIFRSYLARKALCALRGLVKLQALVRGHQVRKQANTTLRRMHALMAIQ 166


>GSVIVT01033548001 assembled CDS
          Length = 425

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 33/46 (71%)

Query: 126 VVVIQAAVRGFLAQRELLKRKNLVKLQAVVRGHLVRQHAVGTLRCV 171
            + IQ A RG+LA++ L   K LV+LQA+VRG +VR+ A+  L+C+
Sbjct: 110 AIKIQTAFRGYLARKALQALKGLVRLQALVRGQIVRRQAITKLKCL 155


>GSVIVT01025635001 assembled CDS
          Length = 317

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 40/57 (70%)

Query: 122 EESIVVVIQAAVRGFLAQRELLKRKNLVKLQAVVRGHLVRQHAVGTLRCVQAIIKMQ 178
           EE+  + IQ A RG+LA+R L   + LV+LQ++++G  V++ A  TLRC+Q + ++Q
Sbjct: 111 EEAAAIKIQTAFRGYLARRALRALRGLVRLQSLIQGTAVKRQAANTLRCMQTLARVQ 167


>GSVIVT01002333001 assembled CDS
          Length = 137

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 36/57 (63%)

Query: 122 EESIVVVIQAAVRGFLAQRELLKRKNLVKLQAVVRGHLVRQHAVGTLRCVQAIIKMQ 178
           E+   + IQA  RG LA+R     ++LVKLQA+VRG  VR+     L C+ A++++Q
Sbjct: 68  EDIAAIKIQAIFRGHLARRAYRALRSLVKLQALVRGVCVRRQTRIALHCMHALVRLQ 124


>GSVIVT01016320001 assembled CDS
          Length = 363

 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 51/88 (57%)

Query: 122 EESIVVVIQAAVRGFLAQRELLKRKNLVKLQAVVRGHLVRQHAVGTLRCVQAIIKMQXXX 181
           EE   + IQ A RG+LA+R L   + LV+L+++++G  V++ A  TLRC+Q + ++Q   
Sbjct: 116 EEVAAIKIQTAFRGYLARRALRALRGLVRLKSLIQGQSVKRQATTTLRCMQTLARVQSQI 175

Query: 182 XXXXXXXXQEGSSTEKKIDGKHEKAISK 209
                   +E  + ++++  K +K + K
Sbjct: 176 RARRIRMSEENLALQRQLQLKRDKELEK 203