Jatropha Genome Database
- JcCA0154651.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0154651.30 - phase: 0
(260 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01033415001 assembled CDS 397 e-111
GSVIVT01009258001 assembled CDS 280 3e-76
GSVIVT01011382001 assembled CDS 276 5e-75
GSVIVT01025462001 assembled CDS 275 2e-74
GSVIVT01037046001 assembled CDS 228 2e-60
GSVIVT01004414001 assembled CDS 189 9e-49
GSVIVT01006470001 assembled CDS 113 7e-26
GSVIVT01028941001 assembled CDS 102 1e-22
GSVIVT01027050001 assembled CDS 89 2e-18
GSVIVT01019758001 assembled CDS 85 4e-17
GSVIVT01021707001 assembled CDS 68 4e-12
GSVIVT01008426001 assembled CDS 67 8e-12
GSVIVT01037405001 assembled CDS 67 9e-12
GSVIVT01025978001 assembled CDS 51 7e-07
GSVIVT01029866001 assembled CDS 50 9e-07
GSVIVT01019278001 assembled CDS 49 3e-06
>GSVIVT01033415001 assembled CDS
Length = 446
Score = 397 bits (1019), Expect = e-111, Method: Compositional matrix adjust.
Identities = 181/207 (87%), Positives = 193/207 (93%)
Query: 35 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ 94
NLNRL+SQ+ISS+T SLRFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAPVISA K YHEQ
Sbjct: 226 NLNRLISQIISSITTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKVYHEQ 285
Query: 95 LSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVD 154
LSV EIT + FEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNA+VA IKTKRT+QFVD
Sbjct: 286 LSVPEITTAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNASVANIKTKRTVQFVD 345
Query: 155 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFV 214
WCPTGFKCGINYQ PT VPG +LAKV+RAVCMISN+T+VAEVF RI HKFDLMY KRAFV
Sbjct: 346 WCPTGFKCGINYQAPTAVPGAELAKVKRAVCMISNNTAVAEVFERITHKFDLMYVKRAFV 405
Query: 215 HWYVGEGMEEGEFSEAREDLAALEKDY 241
HWYVGEGMEEGEFSEAREDLA LEKDY
Sbjct: 406 HWYVGEGMEEGEFSEAREDLATLEKDY 432
>GSVIVT01009258001 assembled CDS
Length = 395
Score = 280 bits (717), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/207 (72%), Positives = 151/207 (72%), Gaps = 56/207 (27%)
Query: 35 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ 94
NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ
Sbjct: 226 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ 285
Query: 95 LSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVD 154
LSVAEITNSAFEPSSMMAK +TIKTKRTIQFVD
Sbjct: 286 LSVAEITNSAFEPSSMMAK----------------------------STIKTKRTIQFVD 317
Query: 155 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFV 214
WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVA
Sbjct: 318 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVA-------------------- 357
Query: 215 HWYVGEGMEEGEFSEAREDLAALEKDY 241
EEGEFSEAREDLAALEKDY
Sbjct: 358 --------EEGEFSEAREDLAALEKDY 376
>GSVIVT01011382001 assembled CDS
Length = 393
Score = 276 bits (707), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 149/207 (71%), Positives = 150/207 (72%), Gaps = 57/207 (27%)
Query: 35 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ 94
NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ
Sbjct: 226 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ 285
Query: 95 LSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVD 154
LSVAEITNSAFEPSSMMAK +VATIKTKRTIQFVD
Sbjct: 286 LSVAEITNSAFEPSSMMAK--------------------------SVATIKTKRTIQFVD 319
Query: 155 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFV 214
WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVA
Sbjct: 320 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVA-------------------- 359
Query: 215 HWYVGEGMEEGEFSEAREDLAALEKDY 241
EFSEAREDLAALEKDY
Sbjct: 360 -----------EFSEAREDLAALEKDY 375
>GSVIVT01025462001 assembled CDS
Length = 417
Score = 275 bits (702), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/162 (80%), Positives = 139/162 (85%), Gaps = 20/162 (12%)
Query: 35 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ 94
NLNRL+SQ+ISSLT SLRFDGA+NVD+TEFQTNL KAYHEQ
Sbjct: 226 NLNRLISQIISSLTTSLRFDGAINVDITEFQTNL--------------------KAYHEQ 265
Query: 95 LSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVD 154
LSV EITN+ FEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVD
Sbjct: 266 LSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVD 325
Query: 155 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEV 196
WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISN+T+VAEV
Sbjct: 326 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEV 367
>GSVIVT01037046001 assembled CDS
Length = 375
Score = 228 bits (581), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/207 (63%), Positives = 132/207 (63%), Gaps = 75/207 (36%)
Query: 35 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ 94
NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNL AYHEQ
Sbjct: 226 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNL---------------------AYHEQ 264
Query: 95 LSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVD 154
LSVAEITNSAFEPSSMMAK +VATIKTKRTIQFVD
Sbjct: 265 LSVAEITNSAFEPSSMMAK--------------------------SVATIKTKRTIQFVD 298
Query: 155 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFV 214
WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVA
Sbjct: 299 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVA-------------------- 338
Query: 215 HWYVGEGMEEGEFSEAREDLAALEKDY 241
EEGEFSEAREDLAALEKDY
Sbjct: 339 --------EEGEFSEAREDLAALEKDY 357
>GSVIVT01004414001 assembled CDS
Length = 209
Score = 189 bits (481), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 90/90 (100%), Positives = 90/90 (100%)
Query: 35 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ 94
NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ
Sbjct: 39 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ 98
Query: 95 LSVAEITNSAFEPSSMMAKCDPRHGKYMAC 124
LSVAEITNSAFEPSSMMAKCDPRHGKYMAC
Sbjct: 99 LSVAEITNSAFEPSSMMAKCDPRHGKYMAC 128
Score = 134 bits (337), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/68 (92%), Positives = 65/68 (95%)
Query: 174 GGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 233
G +A +QRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED
Sbjct: 123 GKYMACLQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 182
Query: 234 LAALEKDY 241
LAALEKDY
Sbjct: 183 LAALEKDY 190
>GSVIVT01006470001 assembled CDS
Length = 287
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 62/99 (62%), Gaps = 37/99 (37%)
Query: 35 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ 94
NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAP
Sbjct: 226 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAP----------- 274
Query: 95 LSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVV 133
YMACCLMYRGDVV
Sbjct: 275 --------------------------YMACCLMYRGDVV 287
>GSVIVT01028941001 assembled CDS
Length = 326
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 54/207 (26%)
Query: 35 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ 94
+LN L+S +S +T LRF G LN D+ + NL+P+PR+HF +
Sbjct: 147 DLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFM---------------- 190
Query: 95 LSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVD 154
++ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+
Sbjct: 191 ---------MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVE 241
Query: 155 WCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFV 214
W P K + PPT ++ A I NSTS+ E+F R
Sbjct: 242 WIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRR--------------- 278
Query: 215 HWYVGEGMEEGEFSEAREDLAALEKDY 241
GM+E EF+EA ++ L +Y
Sbjct: 279 ------GMDEMEFTEAESNMNDLVSEY 299
>GSVIVT01027050001 assembled CDS
Length = 474
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 111/215 (51%), Gaps = 15/215 (6%)
Query: 37 NRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA-YHEQL 95
N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y P+ +A +
Sbjct: 229 NSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKT 288
Query: 96 SVAEITNSAFEPSSMMAKCDPR-----HGKYMACCLMYRGDVVPKDVNAAVATIKTKRTI 150
+V ++ + ++M R KY++ + +G+V P V+ ++ I+ ++ +
Sbjct: 289 TVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLV 348
Query: 151 QFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAK 210
F++W P + ++ + P V ++ + M+++ TS+ +FS+ +++ + K
Sbjct: 349 NFIEWGPASIQVALSRKSPYVQTAHRVSGL-----MLASHTSIRHLFSKCLSQYEKLRKK 403
Query: 211 RAFVHWYVGEGM----EEGEFSEAREDLAALEKDY 241
+AF+ Y M + EF E+R+ + +L +Y
Sbjct: 404 QAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEY 438
>GSVIVT01019758001 assembled CDS
Length = 339
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 24/130 (18%)
Query: 35 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ 94
+LN L+S +S +T LRF G LN D+ + NL+P+PR+HF + +
Sbjct: 188 DLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMQMW------------- 234
Query: 95 LSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVD 154
+ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+
Sbjct: 235 -----------DAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVE 283
Query: 155 WCPTGFKCGI 164
W P K +
Sbjct: 284 WIPNNVKSSM 293
>GSVIVT01021707001 assembled CDS
Length = 284
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 26/124 (20%)
Query: 35 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ 94
+LN L+S +S +T LRF G LN D+ + NL+P+PR+HF +
Sbjct: 183 DLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFM---------------- 226
Query: 95 LSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKD-VNAAVATIKTKRTIQFV 153
++ +MM DPRHG+Y+ M+RG + K+ + A I +IQ +
Sbjct: 227 ---------MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEGLKMASTFIGNSTSIQEI 277
Query: 154 DWCP 157
P
Sbjct: 278 SLRP 281
>GSVIVT01008426001 assembled CDS
Length = 260
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%)
Query: 35 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ 94
+LN L+S +S +T LRF G LN D+ + NL+P+PR+HF + +AP+ S +
Sbjct: 152 DLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRA 211
Query: 95 LSVAEITNSAFEPSSMMAKCD 115
L+V E+T ++ +M+ D
Sbjct: 212 LTVPELTQQMWDAKNMINMND 232
>GSVIVT01037405001 assembled CDS
Length = 166
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 25/102 (24%)
Query: 35 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ 94
+LN L+S +S +T LRF G LN D+ + NL+P+PR+HF +
Sbjct: 25 DLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFM---------------- 68
Query: 95 LSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKD 136
++ +MM DPRHG+Y+ M+RG + K+
Sbjct: 69 ---------MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKE 101
>GSVIVT01025978001 assembled CDS
Length = 174
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 25/101 (24%)
Query: 57 LNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDP 116
LN D+ + N +P+P +HF + ++ +MM DP
Sbjct: 61 LNSDLRKPAVNPIPFPPLHFFM-------------------------MWDAKNMMCAADP 95
Query: 117 RHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 157
RHG+Y+ M++G + K+V + + K + FV+W P
Sbjct: 96 RHGRYLTASAMFKGKMSTKEVEEQMINAQNKNSPYFVEWIP 136
>GSVIVT01029866001 assembled CDS
Length = 264
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 35 NLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQ 94
+LN L+S ++ + LRF G LN D+ + N + +P +H + +AP+IS Y+
Sbjct: 195 DLNHLISATMNGVICCLRFPGQLNSDLRKLVMNPILFPHLHSFMVGFAPLISRGSQYYHA 254
Query: 95 LSVAEI 100
L+V E+
Sbjct: 255 LTVPEL 260
>GSVIVT01019278001 assembled CDS
Length = 79
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 71 YPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRG 130
+PR++F + +AP+ S + L+ E+T ++ ++M DPR+GKY+ +RG
Sbjct: 3 FPRLYFFMVGFAPLTSHGSQQYRTLTFPELTRQTWDTKNIMCVADPRYGKYLTTSTKFRG 62