Jatropha Genome Database

JcCA0153781.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0153781.10 - phase: 0 /partial
         (401 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01008429001 assembled CDS                                       721   0.0  
GSVIVT01011715001 assembled CDS                                       675   0.0  
GSVIVT01011713001 assembled CDS                                       623   e-179
GSVIVT01024322001 assembled CDS                                        79   3e-15
GSVIVT01032155001 assembled CDS                                        72   3e-13
GSVIVT01033285001 assembled CDS                                        71   1e-12
GSVIVT01013797001 assembled CDS                                        53   3e-07
GSVIVT01008737001 assembled CDS                                        51   1e-06

>GSVIVT01008429001 assembled CDS
          Length = 491

 Score =  721 bits (1860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/400 (84%), Positives = 368/400 (92%)

Query: 1   NERINGHHKNVKFICADVTSEDLKFSEESVDLIFSNWLLMYLSDKEIENLAERMVKWLKV 60
           NE INGH+KNVKF+CADV S +L FS ESVDLIFSNWLLMYLSDKE+E L ERMVKWLKV
Sbjct: 91  NESINGHYKNVKFMCADVASPELNFSAESVDLIFSNWLLMYLSDKEVEELVERMVKWLKV 150

Query: 61  GGYIFFRESCFHQSGDSKRKYNPTHYREPRFYTKVFKECQVRDDCGNYYELSLVSCKCVG 120
           GG+IFFRESCFHQSGDSKRK NPTHYREPRFYTKVFKECQ  D  GN YELSLV CKC+G
Sbjct: 151 GGFIFFRESCFHQSGDSKRKVNPTHYREPRFYTKVFKECQTHDCSGNLYELSLVGCKCIG 210

Query: 121 AYVRNKKNQNQICWMWQKVRSEDDKGFQQFLDTVQYKSSGILRYELVFGRGFVSTGGIET 180
           AYVRNKKNQNQICW+WQKV S+DDKGFQ+FLD VQYK +GILRYE VFG GFVSTGGIET
Sbjct: 211 AYVRNKKNQNQICWLWQKVSSQDDKGFQKFLDNVQYKCNGILRYERVFGEGFVSTGGIET 270

Query: 181 TKEFVAKLDLKPGQKVLDVGCGIGGGDFYMAETFDVEVVGIDLSVNMISFALERAIGLKC 240
           TKEFV KLDLKPGQKVLDVGCGIGGGDFYMAE FDVEVVGIDLS+NM+SFALERAIGLKC
Sbjct: 271 TKEFVGKLDLKPGQKVLDVGCGIGGGDFYMAENFDVEVVGIDLSINMVSFALERAIGLKC 330

Query: 241 AVEFEVADCTKKTYPDNTFDVIYSRDTILHIQDKPALFRSFYKWLKPGGKILITDYCKSA 300
           +VEFEVADCTKK+YPDNTFDVIYSRDTILHIQDKPALF+SF+KWLKPGGK+LI+DYCK A
Sbjct: 331 SVEFEVADCTKKSYPDNTFDVIYSRDTILHIQDKPALFKSFFKWLKPGGKVLISDYCKRA 390

Query: 301 GTPSEEFAEYIKQRGYDLHCVKAYGQMLRDAGFDDVIAEDRTDQFNQVLQQELDATEKIK 360
           G PS EF+EYIKQRGYDLH V+AYG+MLRDAGF +VIAEDRTDQF QVLQ+EL+A E  K
Sbjct: 391 GPPSSEFSEYIKQRGYDLHDVEAYGEMLRDAGFIEVIAEDRTDQFLQVLQRELNAVETNK 450

Query: 361 DEFITDFSEKDYNDIIDGWKAKLIRSSSGEQRWGLFIAKK 400
           +EF+ DFSE DYN+I+DGWKAKL+RSSSGEQRWGLFIAKK
Sbjct: 451 NEFVQDFSEDDYNEIVDGWKAKLMRSSSGEQRWGLFIAKK 490


>GSVIVT01011715001 assembled CDS
          Length = 475

 Score =  675 bits (1741), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/401 (81%), Positives = 353/401 (88%)

Query: 1   NERINGHHKNVKFICADVTSEDLKFSEESVDLIFSNWLLMYLSDKEIENLAERMVKWLKV 60
           NE ING  KN KF+CADVTS DL  S  SVDLIFSNWLLMYLSDKE+E+LAERMVKWLKV
Sbjct: 75  NEVINGRFKNTKFVCADVTSPDLDISPGSVDLIFSNWLLMYLSDKEVEDLAERMVKWLKV 134

Query: 61  GGYIFFRESCFHQSGDSKRKYNPTHYREPRFYTKVFKECQVRDDCGNYYELSLVSCKCVG 120
           GG++FFRESCFHQSGD KRK NPTHYREPRFYTKVFKEC + DD GN  E SL++ KCVG
Sbjct: 135 GGFLFFRESCFHQSGDFKRKKNPTHYREPRFYTKVFKECHMSDDFGNSSEFSLITFKCVG 194

Query: 121 AYVRNKKNQNQICWMWQKVRSEDDKGFQQFLDTVQYKSSGILRYELVFGRGFVSTGGIET 180
           AYVRNKKNQNQ      KV S++DKGFQ+FLD VQYK  GILRYE VFG GFVSTGG+ET
Sbjct: 195 AYVRNKKNQNQAMTSTAKVNSQNDKGFQRFLDNVQYKCRGILRYERVFGEGFVSTGGLET 254

Query: 181 TKEFVAKLDLKPGQKVLDVGCGIGGGDFYMAETFDVEVVGIDLSVNMISFALERAIGLKC 240
           TKEFV KLDLKP QKVLDVGCGIGGGDFYMAE FDVEVVGIDLS+NMIS ALERAIG KC
Sbjct: 255 TKEFVTKLDLKPSQKVLDVGCGIGGGDFYMAEDFDVEVVGIDLSINMISIALERAIGRKC 314

Query: 241 AVEFEVADCTKKTYPDNTFDVIYSRDTILHIQDKPALFRSFYKWLKPGGKILITDYCKSA 300
            VEFEVADCTKKTYPDNTFDVIYSRDTILHIQDKPALF+SF+KWLKPGGK+LITDYCK A
Sbjct: 315 LVEFEVADCTKKTYPDNTFDVIYSRDTILHIQDKPALFKSFFKWLKPGGKVLITDYCKRA 374

Query: 301 GTPSEEFAEYIKQRGYDLHCVKAYGQMLRDAGFDDVIAEDRTDQFNQVLQQELDATEKIK 360
           G PS EF EYI+QRGYDLH VKAYGQML+DAGF +VIAEDRT+QF +VLQ+E+DA EK K
Sbjct: 375 GPPSPEFQEYIEQRGYDLHDVKAYGQMLKDAGFCEVIAEDRTEQFIKVLQREMDAVEKNK 434

Query: 361 DEFITDFSEKDYNDIIDGWKAKLIRSSSGEQRWGLFIAKKN 401
           DEFI DFSE+DYN+I+ GWK+KL RSSSGEQRWGLFIAKKN
Sbjct: 435 DEFIQDFSEEDYNEIVGGWKSKLNRSSSGEQRWGLFIAKKN 475


>GSVIVT01011713001 assembled CDS
          Length = 484

 Score =  623 bits (1607), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 302/407 (74%), Positives = 343/407 (84%), Gaps = 7/407 (1%)

Query: 1   NERINGHHKNVKFICADVTSEDLKFSEESVDLIFSNWLLMYLSDKEIENLAERMVKWLKV 60
           NE +NGH  NV F+CADVTS +L  S  SVDLIF N LL +LSDKE+ENLAERMVKWLKV
Sbjct: 75  NEFLNGHFNNVTFMCADVTSPNLDISPGSVDLIFLNCLLTHLSDKEVENLAERMVKWLKV 134

Query: 61  GGYIFFRESCFHQSGDSKRKYNPTHYREPRFYTKVFKECQVRDDCGNYYELSLVSCKCVG 120
           GG++F RES FHQSGD + K NPTHYREPRFYTKVFKEC   DD GN +ELSLV+ KCVG
Sbjct: 135 GGFLFLRESSFHQSGDFQSKNNPTHYREPRFYTKVFKECCTCDDFGNSFELSLVTFKCVG 194

Query: 121 AYVRN-------KKNQNQICWMWQKVRSEDDKGFQQFLDTVQYKSSGILRYELVFGRGFV 173
            +  +         +  QI W+W+ V S+DDKGFQ+FLD VQYK  GILRYE +FG GFV
Sbjct: 195 PHHSSIEMLMLFSNHTLQIYWLWKNVNSQDDKGFQRFLDNVQYKCRGILRYERIFGEGFV 254

Query: 174 STGGIETTKEFVAKLDLKPGQKVLDVGCGIGGGDFYMAETFDVEVVGIDLSVNMISFALE 233
           STGG+ETTKEFVAKL+LKPGQKVLDVGCGIGGGDFYMAE F+VEVVGIDLS+NMIS AL+
Sbjct: 255 STGGLETTKEFVAKLELKPGQKVLDVGCGIGGGDFYMAEDFNVEVVGIDLSINMISIALD 314

Query: 234 RAIGLKCAVEFEVADCTKKTYPDNTFDVIYSRDTILHIQDKPALFRSFYKWLKPGGKILI 293
           RAIG    VEFEVADCTKKTYPD+TFDVIYSRDTILHIQDKPALFRSF+KWLKPGGK+LI
Sbjct: 315 RAIGRNRLVEFEVADCTKKTYPDSTFDVIYSRDTILHIQDKPALFRSFFKWLKPGGKVLI 374

Query: 294 TDYCKSAGTPSEEFAEYIKQRGYDLHCVKAYGQMLRDAGFDDVIAEDRTDQFNQVLQQEL 353
           +DYCK +G PS EF  YI QRGYDLH V+AYGQML+DAGFD+VIAEDRTDQF +VLQ+E+
Sbjct: 375 SDYCKRSGPPSPEFEAYIGQRGYDLHDVEAYGQMLKDAGFDEVIAEDRTDQFIEVLQKEM 434

Query: 354 DATEKIKDEFITDFSEKDYNDIIDGWKAKLIRSSSGEQRWGLFIAKK 400
           D+ EK KD+FI+DFSE+DY DI+ GWK+KL+RSS GEQRWGLFIAKK
Sbjct: 435 DSIEKEKDKFISDFSEEDYKDIVGGWKSKLVRSSMGEQRWGLFIAKK 481


>GSVIVT01024322001 assembled CDS
          Length = 263

 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 2/115 (1%)

Query: 194 QKVLDVGCGIGGGDFYMAETFDVEVVGIDLSVNMISFA--LERAIGLKCAVEFEVADCTK 251
           ++V+DVGCGIGG   Y+A+ +     GI LS      A  L  + GL   V F+VAD   
Sbjct: 43  KRVVDVGCGIGGSSRYLAKKYGASCQGITLSPLQAQRAQTLAASQGLADKVSFQVADALD 102

Query: 252 KTYPDNTFDVIYSRDTILHIQDKPALFRSFYKWLKPGGKILITDYCKSAGTPSEE 306
           + +PD  FD+++S ++  H+ DK        + + PGG I++  +C    +PSEE
Sbjct: 103 QPFPDGQFDLVWSMESGEHMPDKKKFVSELARVVAPGGTIILVTWCHRDLSPSEE 157


>GSVIVT01032155001 assembled CDS
          Length = 421

 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 18/177 (10%)

Query: 178 IETTKEFVA-KLDLKPGQKVLDVGCGIGGGDFYMAETFDVEVVGIDLSVNMISFALERAI 236
           I   + F+A +L +KPGQKVLDVGCGIGG    +A      V G+    N   + + R  
Sbjct: 153 IRRHEHFLALQLGVKPGQKVLDVGCGIGGPLREIARFSSTSVTGL----NNNEYQITRGR 208

Query: 237 GLKC------AVEFEVADCTKKTYPDNTFDVIYSRDTILHIQDKPALFRSFYKWLKPGGK 290
            L C        +F  AD  K  + DNTFD +Y+ +   H  D    ++  Y+ LKPG  
Sbjct: 209 ELNCIAGVDKTCDFVKADFMKMPFSDNTFDAVYAIEATCHAPDALGCYKEIYRVLKPGQC 268

Query: 291 ILITDYCKS-AGTPSEEFAEYIKQR------GYDLHCVKAYGQMLRDAGFDDVIAED 340
               ++C + A  P+ +  + IK          D+   +   + L+ AGF+ +  +D
Sbjct: 269 FAAYEWCMTDAFDPNNQEHQKIKAEIEIGDGLPDIRLTRQCLEALKQAGFEVIWEKD 325


>GSVIVT01033285001 assembled CDS
          Length = 343

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 10/173 (5%)

Query: 178 IETTKEFVA-KLDLKPGQKVLDVGCGIGGGDFYMAETFDVEVVGIDLSVNMISFA--LER 234
           I+  + F+A +L LK GQKVLDVGCGIGG    +A   D  + G++ +   I+    L R
Sbjct: 85  IKRHEHFLAVQLGLKCGQKVLDVGCGIGGPLREIARFSDTSITGLNNNEYQITRGKELNR 144

Query: 235 AIGLKCAVEFEVADCTKKTYPDNTFDVIYSRDTILHIQDKPALFRSFYKWLKPGGKILIT 294
             G+     FE+AD  K  + ++TFD +++ +   H  D    ++  Y+ LKPG      
Sbjct: 145 LAGVDKTCNFELADFMKMPFSNDTFDAVFAIEATCHAPDVLDCYKEIYRVLKPGQCFAAY 204

Query: 295 DYCKS-AGTPSEEFAEYIK---QRGYDLHCVKAYGQ---MLRDAGFDDVIAED 340
           ++C +    P     + IK   + G  L  +++ GQ    L+ AGF+ +  +D
Sbjct: 205 EWCITDCFDPMNREHQRIKGEVELGNGLPDIRSVGQCLEALKLAGFEVLWEKD 257


>GSVIVT01013797001 assembled CDS
          Length = 258

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 6/115 (5%)

Query: 191 KPGQKVLDVGCGIGGGDFYMAETF--DVEVVGIDLSVNMISFALERAIGLKCA----VEF 244
           K G  VLD+ CG G   F ++E    D +V+G D S   +S A  R   L  A    +E+
Sbjct: 69  KRGDDVLDLCCGSGDLAFLLSERVGSDGKVIGFDFSREQLSVASSRQHLLSKACYKNIEW 128

Query: 245 EVADCTKKTYPDNTFDVIYSRDTILHIQDKPALFRSFYKWLKPGGKILITDYCKS 299
              D TK  + D +FD I     + ++ D+    +  ++ LKPG ++ I D+ KS
Sbjct: 129 IEGDATKLPFSDCSFDAITMGYGLRNVLDRGKAMQEMFRVLKPGSRVSILDFNKS 183


>GSVIVT01008737001 assembled CDS
          Length = 281

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 2/79 (2%)

Query: 188 LDLKPGQKVLDVGCGIGGGDFYMAETFDVEVVGIDLSVNMISFAL--ERAIGLKCAVEFE 245
           +D+KPG ++LDVGCG+GG    +A      VVGI ++   ++ A    R  GL    E  
Sbjct: 123 IDVKPGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNRKAGLDSLCEVV 182

Query: 246 VADCTKKTYPDNTFDVIYS 264
             +  +  + DN+FD  YS
Sbjct: 183 CGNFLQMPFADNSFDGAYS 201