Jatropha Genome Database

JcCA0152151.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152151.30 - phase: 0 
         (272 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01009903001 assembled CDS                                       439   e-124
GSVIVT01024106001 assembled CDS                                       429   e-121
GSVIVT01003925001 assembled CDS                                       292   1e-79
GSVIVT01021005001 assembled CDS                                       231   2e-61
GSVIVT01021002001 assembled CDS                                       226   1e-59
GSVIVT01024417001 assembled CDS                                       122   2e-28
GSVIVT01021262001 assembled CDS                                       107   8e-24
GSVIVT01021057001 assembled CDS                                        78   4e-15

>GSVIVT01009903001 assembled CDS
          Length = 272

 Score =  439 bits (1130), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 207/272 (76%), Positives = 231/272 (84%)

Query: 1   MRPQRRPIHVVTTWVRRQPPKVKAFXXXXXXXXXXXXXRFIVHDHDNLFVAAEAVHSIGI 60
           M+ +R PIH V TWVR+QPPKVKAF             R +V DHD+LFVAAEAVH++GI
Sbjct: 1   MKGKRTPIHAVATWVRKQPPKVKAFLAVASGIVAVIFLRMVVRDHDSLFVAAEAVHALGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYM 120
           S+LIYKL KE+TCAGLSLKSQELTA+FLAVRLYCS VMEYDIH            WVIYM
Sbjct: 61  SILIYKLTKERTCAGLSLKSQELTAIFLAVRLYCSLVMEYDIHTILDSATLGTTLWVIYM 120

Query: 121 IRFKLKSSYMEDKDNFAIYYVVVPCAILALFIHPSTSHNLINRILWAFCVYLEAVSVLPQ 180
           IRFKL SSYM+DKDNF IYYVV+PCA+L+L IHPST H++INR+ WAFCVYLEA+SVLPQ
Sbjct: 121 IRFKLMSSYMDDKDNFKIYYVVIPCALLSLIIHPSTPHHIINRVCWAFCVYLEAISVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYGLWPSMVLISE 240
           LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQV+D++G +L ALGYGLWPSMVL+SE
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVMDSQGRILTALGYGLWPSMVLLSE 240

Query: 241 IVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272
           IVQTFILADFCYYYVKS+ GGQLVLRLPSGVV
Sbjct: 241 IVQTFILADFCYYYVKSLVGGQLVLRLPSGVV 272


>GSVIVT01024106001 assembled CDS
          Length = 241

 Score =  429 bits (1104), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/234 (88%), Positives = 215/234 (91%)

Query: 39  RFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVM 98
           R +VHDHDNLFVAAEAVHSIGI VLIYKLMKEKTCAGLSLKSQELTA+FLAVRLYCSFVM
Sbjct: 8   RIVVHDHDNLFVAAEAVHSIGICVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVM 67

Query: 99  EYDIHXXXXXXXXXXXXWVIYMIRFKLKSSYMEDKDNFAIYYVVVPCAILALFIHPSTSH 158
           EYDIH            WVIYMIRF+LKSSYMEDKDNFAIYYVV PCA+LAL IHPSTSH
Sbjct: 68  EYDIHTLLDSATLGTTLWVIYMIRFRLKSSYMEDKDNFAIYYVVGPCALLALVIHPSTSH 127

Query: 159 NLINRILWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLD 218
           + +NRI WAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLD
Sbjct: 128 HFVNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLD 187

Query: 219 TRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272
           TRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYY+KSV GGQLVLRLPSGVV
Sbjct: 188 TRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYIKSVVGGQLVLRLPSGVV 241


>GSVIVT01003925001 assembled CDS
          Length = 213

 Score =  292 bits (747), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 144/212 (67%), Positives = 170/212 (80%), Gaps = 2/212 (0%)

Query: 62  VLIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYMI 121
           VLIYKL  +KTC+GLSLK+QELTAMFLAVRLYCSFVME DIH            WVIYMI
Sbjct: 2   VLIYKLTTQKTCSGLSLKTQELTAMFLAVRLYCSFVMEGDIHTVLDLATLISTLWVIYMI 61

Query: 122 RFKLKSSYMEDKDNFAIYY-VVVPCAILALFIHPSTSHNLINRILWAFCVYLEAVSVLPQ 180
           RFKLKS+Y+++ DNF IYY VV+P AILA+ +HP T H++I+RI WAFCVYLE+VSVLPQ
Sbjct: 62  RFKLKSTYIKELDNFPIYYYVVLPSAILAILVHPYTQHSMISRICWAFCVYLESVSVLPQ 121

Query: 181 LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYG-LWPSMVLIS 239
           L +MQN K+VEPFTAHYVFALGVARFL CAHW++QV +  G  L  +G G LW  M+L++
Sbjct: 122 LWLMQNAKMVEPFTAHYVFALGVARFLGCAHWIIQVYEIGGKYLYLIGSGFLWLPMILLA 181

Query: 240 EIVQTFILADFCYYYVKSVFGGQLVLRLPSGV 271
           E+VQTFILADFCYYY+KSV  GQLV+ L S V
Sbjct: 182 EVVQTFILADFCYYYIKSVMDGQLVMTLSSPV 213


>GSVIVT01021005001 assembled CDS
          Length = 260

 Score =  231 bits (589), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 130/248 (52%), Positives = 167/248 (67%), Gaps = 6/248 (2%)

Query: 14  WVRRQPPKVKAFXXXXXXXXXXXXXRFIVHDHDN---LFVAAEAVHSIGISVLIYKLMKE 70
           WV RQP KVK               R ++  +DN   LF+A++ +H  GI +LI+KL+K 
Sbjct: 13  WVERQPMKVKILVGVLILGFCLVGLRHLM-KYDNGFPLFMASQFIHLSGIIILIFKLIKT 71

Query: 71  KTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFKLKSSYM 130
           KTC+GLSLKSQELTA+ +A R YCSF +E                WVIYMIRFKLK +Y 
Sbjct: 72  KTCSGLSLKSQELTAIVMATRTYCSFEVEEHGLTLLGSAIFLSTLWVIYMIRFKLKPTYS 131

Query: 131 EDKDNFAIYYVVVPCAILALFIHPSTSHNLINRILWAFCVYLEAVSVLPQLRVMQNTKIV 190
           ++ D+  +Y +VVP AILA+ IHP   H L+ RI+W+F +YL AVSVLPQLR+MQN K+V
Sbjct: 132 KELDSMPLYSMVVPPAILAVLIHPHIDHRLLIRIVWSFSLYLAAVSVLPQLRLMQNAKMV 191

Query: 191 EPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALG--YGLWPSMVLISEIVQTFILA 248
           EPFTA+YVFALGVARFL+C  W++ + +T G  L+  G    LW  MV++SE V TFILA
Sbjct: 192 EPFTAYYVFALGVARFLNCGSWIIHIYETGGRYLMFSGNWTQLWVLMVILSEFVHTFILA 251

Query: 249 DFCYYYVK 256
           DFCYYY+K
Sbjct: 252 DFCYYYLK 259


>GSVIVT01021002001 assembled CDS
          Length = 308

 Score =  226 bits (576), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 130/263 (49%), Positives = 168/263 (63%), Gaps = 7/263 (2%)

Query: 14  WVRRQPPKVKAFXXXXXXXXXXXXXRFIVHDHDN--LFVAAEAVHSIGISVLIYKLMKEK 71
           WV RQP KVK               R +V   +   LFVA++ +H  GI +LI+KL+K K
Sbjct: 13  WVERQPMKVKLLVGILILGFCLVGLRHLVKYGNGFPLFVASQFIHLSGIIILIFKLIKTK 72

Query: 72  TCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFKLKSSYME 131
           TC+GLSLKSQELTA  +A R YCSF +E                WVIYMIRFKLK +Y +
Sbjct: 73  TCSGLSLKSQELTATVIAARAYCSFEVEDHTFTLLSSAIFLSTLWVIYMIRFKLKPTYSK 132

Query: 132 DKDNFAIYYVVVPCAILALFIHPST-SHNLINRILWAFCVYLEAVSVLPQLRVMQNTKIV 190
           + D+  +Y +VVP AILA+ IHP    H L+ RI+W+F  YL A+SVLPQLR+MQN K+V
Sbjct: 133 ELDSMPLYSLVVPSAILAVLIHPRHFHHRLLTRIIWSFSFYLGAISVLPQLRLMQNAKMV 192

Query: 191 EPFTAHYVFALGVARFLSCAHWVLQVLDTRGH--LLVALGYGLWPSMVLISEIVQTFILA 248
           EPFTA+YVFALGV RFL+C  W++ + +T G   +L +    LW  MVL+SE V  FILA
Sbjct: 193 EPFTAYYVFALGVGRFLNCGSWIIHIYETGGQYLMLPSNWTQLWVLMVLLSEFVDAFILA 252

Query: 249 DFCYYYVKSVFGGQLVLRLPSGV 271
           DFCYYY+K  F  Q ++   +G+
Sbjct: 253 DFCYYYLKRFF--QFIISRSNGI 273


>GSVIVT01024417001 assembled CDS
          Length = 216

 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 128/229 (55%), Gaps = 20/229 (8%)

Query: 47  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAMFLAVR---LYCSFVMEYDI 102
           N+F +A +  H + I VL+ K+   K+CAG+SLK+QEL  +    R   L+  ++  Y+ 
Sbjct: 2   NIFRLAGDMTHLLSIVVLLLKIRTMKSCAGISLKTQELYVIVFVTRYLDLFTRYISLYN- 60

Query: 103 HXXXXXXXXXXXXWVIYMIRFK--LKSSYMEDKDNFAIYYVVVPCAILALFIHPSTSHNL 160
                         +++ +R+   +K +Y + +D F  Y++V+PC +LAL IH S+S   
Sbjct: 61  -SVMKLVFLGTSIAIVWYMRYHKVVKQTYSKQEDTFRHYFLVLPCFVLALLIHRSSS--- 116

Query: 161 INRILWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTR 220
           +  ILW F +YLEAV+++PQL ++Q ++I++  T +YVF LG  R L   +W  + L   
Sbjct: 117 VTEILWTFSIYLEAVAIVPQLVLLQRSRIIDNLTGNYVFLLGAYRALYILNWAYRFLVED 176

Query: 221 GHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPS 269
            H      Y   P    IS +VQT + ADF YYY KS +  +  L+LP+
Sbjct: 177 NH-----HYHWIP---WISGLVQTALYADFFYYYFKS-WKNREKLQLPA 216


>GSVIVT01021262001 assembled CDS
          Length = 215

 Score =  107 bits (266), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 117/228 (51%), Gaps = 19/228 (8%)

Query: 47  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAMFLAVR---LYCSFVMEYD- 101
           N+F +A +  H + I VL+ K+   K+C+G+SLK+QEL A+    R   L+  F+  Y+ 
Sbjct: 2   NIFRLAGDMTHLMSILVLLLKIYATKSCSGISLKTQELYALVFLTRYLDLFTDFISVYNT 61

Query: 102 IHXXXXXXXXXXXXWVIYMIRFKLKSSYMEDKDNFAIYYVVVPCAILALFIHPSTSHNLI 161
           +             W + M R  +K SY    D F  Y++V  C + AL +H   +    
Sbjct: 62  VMKLVFIGSSLAIVWCMRMHR-TVKRSYDGQLDTFRHYFLVAACFLSALIVHEKFT---F 117

Query: 162 NRILWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRG 221
             I WAF +YLEAV++LPQL ++Q +  V+  T  YVF LG  R L   +W+ +   T  
Sbjct: 118 QEIFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVFFLGAYRALYILNWIYRYF-TEQ 176

Query: 222 HLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPS 269
           H      +  W  +  IS +VQT + ADF YYY  S +     L+LP+
Sbjct: 177 H------FSRW--IACISGLVQTALYADFFYYYFIS-WKNNSKLQLPA 215


>GSVIVT01021057001 assembled CDS
          Length = 414

 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 96/166 (57%), Gaps = 9/166 (5%)

Query: 47  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAMFLAVR---LYCSFVMEYD- 101
           N+F +A +  H   + VL+ K+   K+CAG+SLK+QEL A+  A R   ++  ++  Y+ 
Sbjct: 2   NIFRLAGDMTHLASVLVLLLKIHTIKSCAGISLKTQELYALVFATRYLDIFTDYISLYNT 61

Query: 102 IHXXXXXXXXXXXXWVIYMIRFKLKSSYMEDKDNFAIYYVVVPCAILALFIHPSTSHNLI 161
           +             W I   +  ++ SY +D+D F  +++V+PC +LAL ++   +    
Sbjct: 62  VMKLIFLGSSFSIVWYIRHHKI-VRRSYDKDQDTFRHFFLVLPCLLLALVMNEKFT---F 117

Query: 162 NRILWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFL 207
             +LWAF +YLEAV++LPQL ++Q T+ ++  T  YVF LG+ R L
Sbjct: 118 LEVLWAFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFLLGIIRVL 163