Jatropha Genome Database
- JcCA0151951.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0151951.10 + phase: 0 /pseudo/partial
(349 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01007965001 assembled CDS 294 5e-80
GSVIVT01032644001 assembled CDS 84 9e-17
GSVIVT01027443001 assembled CDS 80 1e-15
GSVIVT01025087001 assembled CDS 80 2e-15
GSVIVT01038647001 assembled CDS 79 2e-15
GSVIVT01009198001 assembled CDS 62 3e-10
GSVIVT01012518001 assembled CDS 59 3e-09
GSVIVT01036499001 assembled CDS 57 1e-08
GSVIVT01009197001 assembled CDS 57 2e-08
GSVIVT01036037001 assembled CDS 57 2e-08
GSVIVT01010855001 assembled CDS 56 2e-08
GSVIVT01029593001 assembled CDS 55 6e-08
GSVIVT01011897001 assembled CDS 55 6e-08
GSVIVT01027910001 assembled CDS 54 2e-07
GSVIVT01024661001 assembled CDS 54 2e-07
GSVIVT01030127001 assembled CDS 53 2e-07
GSVIVT01003983001 assembled CDS 53 2e-07
GSVIVT01030628001 assembled CDS 51 7e-07
GSVIVT01020352001 assembled CDS 50 1e-06
GSVIVT01025065001 assembled CDS 50 1e-06
GSVIVT01019393001 assembled CDS 50 2e-06
>GSVIVT01007965001 assembled CDS
Length = 533
Score = 294 bits (752), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 146/233 (62%), Positives = 171/233 (73%), Gaps = 29/233 (12%)
Query: 91 EQPVNGTQLHENGETRESYSQDEFCRSSSVPDSISMERSCTPPMSREFPQKNSKDESLSL 150
E+ VN TQ HENGE E+YSQ + +FP K S
Sbjct: 296 EKGVNDTQEHENGEAWENYSQGD-----------------------DFPSK-----EFSQ 327
Query: 151 VLMHSRNDLQLDASGLSTQNVYPYYMSGVVNQVLMPSSAQLYQKNLHELQTNVP-SAIMP 209
V +H RN+ Q+D SG YPY MSGV+NQV+MPSSAQLY K+LH++Q N SA++P
Sbjct: 328 VPIHPRNEHQVDISGFPGHTAYPYCMSGVMNQVMMPSSAQLYPKSLHDMQNNATTSAMLP 387
Query: 210 QYNHLQQCSPHVTGMASFPYYPVNICLQPGQMPTAHSWPSFGNSSSADVKINKVDRREAA 269
QYNHL QC PHV G+ASFPYYPV+ICLQPGQM T H WPS+GNSSS +VK+ KVDRREAA
Sbjct: 388 QYNHLPQCPPHVPGVASFPYYPVSICLQPGQMSTTHPWPSYGNSSSTEVKLGKVDRREAA 447
Query: 270 LMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLNGQPST 322
L+KFRQKRKERCFDKKIRYVNRK+LAERRPRVRGQFVRK+NGVNVDLNG+P++
Sbjct: 448 LIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKMNGVNVDLNGRPAS 500
>GSVIVT01032644001 assembled CDS
Length = 769
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 46/52 (88%)
Query: 258 VKINKVDRREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKV 309
V N+ +REAAL KFRQKRKERCF+KK+RY +RK+LAE+RPR+RGQFVR+V
Sbjct: 707 VDQNQYAQREAALNKFRQKRKERCFEKKVRYQSRKRLAEQRPRIRGQFVRRV 758
>GSVIVT01027443001 assembled CDS
Length = 593
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 43/45 (95%)
Query: 265 RREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKV 309
+REAALMKFR KRK+RCF+KK+RY +RK+LAE+RPRV+GQFVR+V
Sbjct: 540 QREAALMKFRLKRKDRCFEKKVRYQSRKRLAEQRPRVKGQFVRQV 584
>GSVIVT01025087001 assembled CDS
Length = 103
Score = 79.7 bits (195), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/58 (63%), Positives = 47/58 (81%)
Query: 251 GNSSSADVKINKVDRREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRK 308
G V+ ++ +REAAL KFRQKRKERCF+KK+RY +RKKLAE+RPR+RGQFVR+
Sbjct: 18 GKGGGNRVEEDRFAQREAALTKFRQKRKERCFEKKVRYQSRKKLAEQRPRIRGQFVRQ 75
>GSVIVT01038647001 assembled CDS
Length = 747
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 44/48 (91%)
Query: 265 RREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGV 312
+REAAL KFR KRK+RCF+KK+RY +RKKLAE+RPRV+GQFVR+V+ +
Sbjct: 559 QREAALTKFRLKRKDRCFEKKVRYESRKKLAEQRPRVKGQFVRQVHTI 606
>GSVIVT01009198001 assembled CDS
Length = 324
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 37/48 (77%)
Query: 259 KINKVDRREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFV 306
K + + RR A+L++FR+KRKERCFDKKIRY RK++A+R R GQF
Sbjct: 84 KRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFA 131
>GSVIVT01012518001 assembled CDS
Length = 254
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 265 RREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFV 306
+R A+L +FR+KRKERCFDKKIRY RK++A R R +GQF
Sbjct: 94 QRAASLSRFREKRKERCFDKKIRYTVRKEVALRMQRKKGQFT 135
>GSVIVT01036499001 assembled CDS
Length = 438
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 266 REAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLNGQPST 322
REA ++++R+K+K R F+K IRY +RK AE RPR++G+F ++ + V V+++ ST
Sbjct: 369 REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD-VEVEVDQMFST 424
>GSVIVT01009197001 assembled CDS
Length = 248
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 266 REAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQF 305
R A+L +FRQKRKERCFDKKIRY R+++A R R +GQF
Sbjct: 91 RAASLNRFRQKRKERCFDKKIRYNVRQEVALRMQRNKGQF 130
>GSVIVT01036037001 assembled CDS
Length = 307
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 242 PTAHSWPSFGNSSSADVKINKVDRREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRV 301
P S + S++ +I+ REA ++++R+KRK R F+K IRY +RK AE RPR+
Sbjct: 216 PFGRSMNTGSESANQTAQISSGIDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRI 275
Query: 302 RGQFVRK 308
+G+F ++
Sbjct: 276 KGRFAKR 282
>GSVIVT01010855001 assembled CDS
Length = 392
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 41/54 (75%), Gaps = 3/54 (5%)
Query: 266 REAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLNGQ 319
REA+++++++KR+ R F KKIRY RK A+RRPR++G+FVR+ N + NGQ
Sbjct: 341 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRPNS---NSNGQ 391
>GSVIVT01029593001 assembled CDS
Length = 244
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 263 VDRREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFV 306
V R A+L++FR+KRKER FDKKIRY RK++A R R +GQF
Sbjct: 88 VPHRLASLIRFREKRKERNFDKKIRYTVRKEVALRMQRNKGQFT 131
>GSVIVT01011897001 assembled CDS
Length = 432
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 235 CLQPGQMPTAHSWPSFGNSSSADVKINKVDRREAALMKFRQKRKERCFDKKIRYVNRKKL 294
CL + H + FG + REA + ++R+KR+ R F KKIRY RK
Sbjct: 346 CLGTCGIQVHHPYGEFGGMGEQQAAMGD-GGREARVSRYREKRRTRLFSKKIRYEVRKLN 404
Query: 295 AERRPRVRGQFVRKVN 310
AE+RPR++G+FV++ +
Sbjct: 405 AEKRPRMKGRFVKRAS 420
>GSVIVT01027910001 assembled CDS
Length = 367
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 263 VDRREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVR 307
V++R+ + ++ +KR ER F KKI+Y RK LA+ RPRVRG+F +
Sbjct: 266 VEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAK 310
>GSVIVT01024661001 assembled CDS
Length = 101
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Query: 249 SFGNSS---SADVKINKVDRREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQF 305
SF N+S V + RREA+++++++KR+ R F KKIRY RK A++RPR++G+F
Sbjct: 31 SFKNTSYMGEVPVMEEEKTRREASVLRYKEKRQTRLFSKKIRYQVRKLNADKRPRLKGRF 90
Query: 306 VRKV 309
V++V
Sbjct: 91 VKRV 94
>GSVIVT01030127001 assembled CDS
Length = 415
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 269 ALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVD 315
A+M++R+K+K R FDK++RY +RK A+ R RV+G+FV+ + D
Sbjct: 361 AVMRYREKKKNRKFDKRVRYASRKARADVRQRVKGRFVKAGEAYDYD 407
>GSVIVT01003983001 assembled CDS
Length = 318
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 39/48 (81%)
Query: 261 NKVDRREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRK 308
+K +R+A+++++++KR+ R F K+IRY RK AE+RPR++G+FV++
Sbjct: 270 SKKGQRQASVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKR 317
>GSVIVT01030628001 assembled CDS
Length = 338
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 266 REAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVD 315
R+ A M++ +K+K R F K+IRY +RK A+ R RVRG+FV+ + D
Sbjct: 282 RDKAKMRYNEKKKTRTFGKQIRYASRKARADTRKRVRGRFVKAGEAYDYD 331
>GSVIVT01020352001 assembled CDS
Length = 215
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 24/125 (19%)
Query: 203 VPSAIMPQYNHLQQCSPHVTGMASFPY-YPVNIC------------LQPGQMPTA-HSWP 248
VP+ +P++N C + G+ SF Y ++C +P TA +W
Sbjct: 41 VPA--LPEFNMGGLCG--IAGVQSFGGGYQQDVCEFGDECGGFVPDFRPVYPATAGDNWG 96
Query: 249 SFGN------SSSADVKINKVDRREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVR 302
GN S+ V V+ R+ ++++ +KR +R F+K I+Y RK LA+RR RVR
Sbjct: 97 IQGNHIAGIEESNTKVGRYSVEERKDRILRYLKKRNQRNFNKTIKYACRKTLADRRVRVR 156
Query: 303 GQFVR 307
G+F R
Sbjct: 157 GRFAR 161
>GSVIVT01025065001 assembled CDS
Length = 251
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%)
Query: 264 DRREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVR 307
+ ++ + ++R KR +R F+KKI+Y RK LA+ RPR+RG+F R
Sbjct: 168 EEKKERIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFAR 211
>GSVIVT01019393001 assembled CDS
Length = 262
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 252 NSSSADVKINKVDRREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVR 307
+++S V + R+ + K+R KR +R F+K I+Y RK LA+ RPRVRG+F R
Sbjct: 148 DAASFRVGRYSAEERKERIDKYRAKRTQRNFNKTIKYACRKTLADSRPRVRGRFAR 203