Jatropha Genome Database

JcCA0151911.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151911.10 + phase: 2 /partial
         (146 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01026766001 assembled CDS                                       233   3e-62
GSVIVT01017353001 assembled CDS                                       229   4e-61
GSVIVT01027318001 assembled CDS                                       161   9e-41
GSVIVT01027342001 assembled CDS                                       159   5e-40
GSVIVT01027327001 assembled CDS                                       143   3e-35
GSVIVT01018212001 assembled CDS                                       141   9e-35
GSVIVT01027333001 assembled CDS                                       138   8e-34
GSVIVT01004719001 assembled CDS                                       130   3e-31
GSVIVT01035966001 assembled CDS                                       126   3e-30
GSVIVT01020843001 assembled CDS                                       114   2e-26
GSVIVT01015428001 assembled CDS                                        53   5e-08

>GSVIVT01026766001 assembled CDS
          Length = 383

 Score =  233 bits (593), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 109/146 (74%), Positives = 127/146 (86%)

Query: 1   LEVIDRCFSQRTVEDILSTLERETMNNADAWILTTIQSLKKASPTSLKISLRSIRKGRLE 60
           L VI++CFS+RT+E+ILSTLERE +N+AD WI  TIQSL+KASPTSLKISLRSIR+GRL+
Sbjct: 238 LAVINKCFSRRTIEEILSTLEREAVNSADNWISATIQSLQKASPTSLKISLRSIREGRLQ 297

Query: 61  GVGQCLVREYRMVCHVMQGKVSKDFFEGCRAILLDKDRNPKWEPPKLELVSNSNVEQYFS 120
            VGQCL REYRMVCHV+QG+VSKDFFEGCRAILLDKD+NPKWEP +LE ++ S VEQYFS
Sbjct: 298 DVGQCLTREYRMVCHVLQGEVSKDFFEGCRAILLDKDKNPKWEPSRLEQINESMVEQYFS 357

Query: 121 KIDDEEWEDLKLPARRHLPGYATAKL 146
           K+DDEEWEDLKLPA+        AKL
Sbjct: 358 KVDDEEWEDLKLPAKFTFSASLLAKL 383


>GSVIVT01017353001 assembled CDS
          Length = 383

 Score =  229 bits (583), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 103/146 (70%), Positives = 129/146 (88%)

Query: 1   LEVIDRCFSQRTVEDILSTLERETMNNADAWILTTIQSLKKASPTSLKISLRSIRKGRLE 60
           L++I+RCFS+RT+E+ILS LERE + +AD WI +TIQSL+KASPTSLKISLRSIR+GR++
Sbjct: 238 LDIINRCFSRRTIEEILSALEREAVKSADDWISSTIQSLQKASPTSLKISLRSIREGRVQ 297

Query: 61  GVGQCLVREYRMVCHVMQGKVSKDFFEGCRAILLDKDRNPKWEPPKLELVSNSNVEQYFS 120
           GVGQCL+REYRMVCHVM+G+VSKDF EGCRAIL DKD+NPKWEP +L+ +++S ++QYFS
Sbjct: 298 GVGQCLIREYRMVCHVMRGEVSKDFVEGCRAILFDKDKNPKWEPSRLDQLNDSMIDQYFS 357

Query: 121 KIDDEEWEDLKLPARRHLPGYATAKL 146
           ++DDEEWEDLKLPAR      A AKL
Sbjct: 358 RVDDEEWEDLKLPARSSYTASALAKL 383


>GSVIVT01027318001 assembled CDS
          Length = 350

 Score =  161 bits (408), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 75/146 (51%), Positives = 106/146 (72%)

Query: 1   LEVIDRCFSQRTVEDILSTLERETMNNADAWILTTIQSLKKASPTSLKISLRSIRKGRLE 60
           LE+I++CFS +TVE+IL  L+ E  N +DAWI+  I S+K ASPTSLKI+LRSIR+ R++
Sbjct: 205 LEIINKCFSAKTVEEILLLLQNEVANGSDAWIIEAISSMKSASPTSLKITLRSIREARMQ 264

Query: 61  GVGQCLVREYRMVCHVMQGKVSKDFFEGCRAILLDKDRNPKWEPPKLELVSNSNVEQYFS 120
            +  CLVR+Y +  H++QG  S DF EG R  L +K + PKWEP KLELVS+  V+ YF+
Sbjct: 265 ELEDCLVRDYFICYHIIQGIHSIDFLEGSRTKLFEKGKKPKWEPSKLELVSDEMVDHYFA 324

Query: 121 KIDDEEWEDLKLPARRHLPGYATAKL 146
           K++  + E L+LPAR+++P    +KL
Sbjct: 325 KVEAPDIEHLRLPARKNIPKALESKL 350


>GSVIVT01027342001 assembled CDS
          Length = 409

 Score =  159 bits (402), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 74/138 (53%), Positives = 98/138 (71%)

Query: 1   LEVIDRCFSQRTVEDILSTLERETMNNADAWILTTIQSLKKASPTSLKISLRSIRKGRLE 60
           LE I++CFS+RTVE+ILS LE E  N  + WI+  I S+K ASPTSLKI L+ IR+GR +
Sbjct: 264 LETINKCFSRRTVEEILSMLENEAANGDNKWIIQAISSMKSASPTSLKIFLKLIREGRTK 323

Query: 61  GVGQCLVREYRMVCHVMQGKVSKDFFEGCRAILLDKDRNPKWEPPKLELVSNSNVEQYFS 120
            +  CL+++Y + CH+ Q   + DF EG RA L +K + PKWEP KLELV +  V QYF 
Sbjct: 324 ELKDCLIQDYTIACHMFQRTFNPDFIEGSRAKLFEKGKQPKWEPSKLELVRDDFVNQYFE 383

Query: 121 KIDDEEWEDLKLPARRHL 138
           K+DD +WE L+LPAR +L
Sbjct: 384 KVDDADWEYLQLPARPNL 401


>GSVIVT01027327001 assembled CDS
          Length = 385

 Score =  143 bits (361), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 68/122 (55%), Positives = 92/122 (75%), Gaps = 1/122 (0%)

Query: 1   LEVIDRCFSQRTVEDILSTLERETMNNADAWILTTIQSLKKASPTSLKISLRSIRKGRLE 60
           LE I++CFS+ TVE+ILSTLE E +N  D WI+  I S+K ASPTSLKI L+ IR+GR +
Sbjct: 238 LETINKCFSKGTVEEILSTLENEVVN-GDKWIVHAISSMKSASPTSLKIFLKLIREGRTK 296

Query: 61  GVGQCLVREYRMVCHVMQGKVSKDFFEGCRAILLDKDRNPKWEPPKLELVSNSNVEQYFS 120
            +  CL+++Y +VCH+++   ++DF EG RA L +KD+ PKWEP KLELVS+  V+QYF 
Sbjct: 297 ELKDCLIQDYTIVCHLIRRTFNRDFIEGSRAKLFEKDKQPKWEPSKLELVSDEMVDQYFQ 356

Query: 121 KI 122
           KI
Sbjct: 357 KI 358


>GSVIVT01018212001 assembled CDS
          Length = 405

 Score =  141 bits (356), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 70/133 (52%), Positives = 93/133 (69%), Gaps = 1/133 (0%)

Query: 1   LEVIDRCFSQRTVEDILSTLERETMNNADAWILTTIQSLKKASPTSLKISLRSIRKGRLE 60
           +E +D+CFS  TVE+I+  LE ET    D W  +T++ LK+ASP SLK+ LRSIR+GR +
Sbjct: 266 IETLDKCFSHGTVEEIIDALESETARTQDPWCSSTLKRLKEASPLSLKVCLRSIREGRFQ 325

Query: 61  GVGQCLVREYRMVCHVMQGKVSKDFFEGCRAILLDKDRNPKWEPPKLELVSNSNVEQYFS 120
            + QCLVREYRM    + G++S DF EG RA +++KD  PKW PP LE VS+  V+QYFS
Sbjct: 326 TLDQCLVREYRMSVQGISGQISNDFCEGIRARMVEKDYAPKWNPPSLEEVSSDMVDQYFS 385

Query: 121 KIDDEEWEDLKLP 133
            I + E E L+LP
Sbjct: 386 PISELEPE-LELP 397


>GSVIVT01027333001 assembled CDS
          Length = 385

 Score =  138 bits (348), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 65/124 (52%), Positives = 88/124 (70%)

Query: 1   LEVIDRCFSQRTVEDILSTLERETMNNADAWILTTIQSLKKASPTSLKISLRSIRKGRLE 60
           LE I++CFS+RTVE+ILS LE E  N  + WI+  I S+K ASPTSLKI L+ IR+GR +
Sbjct: 251 LETINKCFSRRTVEEILSILENEAANGDNKWIIQAISSMKSASPTSLKIFLKLIREGRAK 310

Query: 61  GVGQCLVREYRMVCHVMQGKVSKDFFEGCRAILLDKDRNPKWEPPKLELVSNSNVEQYFS 120
            +  CL+++Y + CH+ +   + DF EG RA L +K + PKWEP KLELVS+  V+QYF 
Sbjct: 311 ELKDCLIQDYAIACHMFRRSFNPDFIEGSRAKLFEKRKQPKWEPSKLELVSDEFVDQYFE 370

Query: 121 KIDD 124
           K+ D
Sbjct: 371 KLLD 374


>GSVIVT01004719001 assembled CDS
          Length = 438

 Score =  130 bits (326), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 95/135 (70%), Gaps = 1/135 (0%)

Query: 1   LEVIDRCFSQRTVEDILSTLERETMNNADAWILTTIQSLKKASPTSLKISLRSIRKGRLE 60
           +E++D+CF   TVE+I++ LE E   + D W ++T++ L++ASP SLKI+LRSIR+ R +
Sbjct: 299 IEMLDKCFGHDTVEEIVNALESEATGSNDPWCISTLKKLRQASPLSLKIALRSIRESRSQ 358

Query: 61  GVGQCLVREYRMVCHVMQGKVSKDFFEGCRAILLDKDRNPKWEPPKLELVSNSNVEQYFS 120
            + +CL+REYR+  H +  ++S DF+EG RA L+D++  PKW PP+LE VS   V+ YF 
Sbjct: 359 TLEECLIREYRISVHAISRQISSDFYEGVRARLVDRNFAPKWNPPRLEDVSEDMVDCYFL 418

Query: 121 KIDDEEWEDLKLPAR 135
            + + E E L+LP +
Sbjct: 419 PLGEYEPE-LELPKK 432


>GSVIVT01035966001 assembled CDS
          Length = 407

 Score =  126 bits (317), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 65/139 (46%), Positives = 91/139 (65%), Gaps = 1/139 (0%)

Query: 1   LEVIDRCFSQRTVEDILSTLERETMNNADAWILTTIQSLKKASPTSLKISLRSIRKGRLE 60
           +E ID+CF   TVE+I++ LE E  ++ D W  T ++ LK+ASP SLK++LRSIR+GR +
Sbjct: 268 IETIDKCFCHDTVEEIINALENEASSSYDEWSATALKKLKEASPLSLKVTLRSIREGRFQ 327

Query: 61  GVGQCLVREYRMVCHVMQGKVSKDFFEGCRAILLDKDRNPKWEPPKLELVSNSNVEQYFS 120
            + QCL REYR+    +   VS DF EG RA  +DKD  PKW+PP L  V+   V+ YF+
Sbjct: 328 PLDQCLAREYRISLVGITKWVSDDFCEGVRARFVDKDFAPKWDPPSLGEVTKDMVDCYFT 387

Query: 121 KIDDEEWEDLKLPARRHLP 139
           ++D+ E E L+LP     P
Sbjct: 388 RLDEFEPE-LELPTALREP 405


>GSVIVT01020843001 assembled CDS
          Length = 389

 Score =  114 bits (284), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 52/132 (39%), Positives = 88/132 (66%), Gaps = 2/132 (1%)

Query: 4   IDRCFSQRTVEDILSTLERETMNNADAWILTTIQSLKKASPTSLKISLRSIRKGRLEGVG 63
           I+ CFS+ +VE+I+ + E E     +AWI   ++SLK++SPT LKI+LRSIR+GR + + 
Sbjct: 238 INECFSKDSVEEIIKSFETEARKEGNAWIGPMLKSLKRSSPTGLKITLRSIREGRNQTLA 297

Query: 64  QCLVREYRMVCHVMQGKVSKDFFEGCRAILLDKDRNPKWEPPKLELVSNSNVEQYFSKID 123
           + L +E+R+  ++++  +S D +EG RA+ +DKD  PKW+PP L+ V+   V+  F    
Sbjct: 298 ESLKKEFRLTMNILRTTISNDVYEGIRALTIDKDNAPKWDPPTLDKVNGEKVDIVFQPFK 357

Query: 124 DEEWEDLKLPAR 135
           +E   +L++P +
Sbjct: 358 EE--LELQIPEK 367


>GSVIVT01015428001 assembled CDS
          Length = 407

 Score = 53.1 bits (126), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 15/130 (11%)

Query: 2   EVIDRCFSQRTVEDILSTLERETMNN---ADAWILTTIQSLKKASPTSLKISLR-----S 53
           +++    + ++V +I+  L++  ++       W    +  L K +P SL ++ +     +
Sbjct: 269 QIVSTFSADKSVNEIIEELKKHQLSTDAIVSEWAKEALLGLGKGAPFSLCLTQKHFSRVA 328

Query: 54  IRKGR----LEGVGQCLVREYRMVCHVMQGKVSKDFFEGCRAILLDKDRNPKWEPPKLEL 109
           + +G+    L  +   +  EYR+    ++  +  DF EG RA+L+DKD+ PKW P  LE 
Sbjct: 329 LARGKNDSDLCSLSGVMKTEYRIA---LRSSLRNDFAEGVRAVLVDKDQKPKWNPSSLEE 385

Query: 110 VSNSNVEQYF 119
           V  + VE  F
Sbjct: 386 VDLNEVEAVF 395