Jatropha Genome Database

JcCA0151751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151751.10 + phase: 2 /partial
         (241 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01034359001 assembled CDS                                       447   e-126
GSVIVT01034358001 assembled CDS                                       444   e-125
GSVIVT01010101001 assembled CDS                                       201   3e-52
GSVIVT01008711001 assembled CDS                                       161   2e-40
GSVIVT01005084001 assembled CDS                                        75   2e-14
GSVIVT01018091001 assembled CDS                                        47   8e-06

>GSVIVT01034359001 assembled CDS
          Length = 755

 Score =  447 bits (1149), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 208/241 (86%), Positives = 223/241 (92%)

Query: 1   KWATASDGTQIPISVGYRKDLVKIDGSHPLLLYGYGSYEICIDTKFKASRLSLLDRGFIF 60
           KWA ASDGTQIP+S+ YRKDLVK+DGS PLLLYGYGSYEICID  FKASRLSLLDRGFIF
Sbjct: 454 KWANASDGTQIPLSIVYRKDLVKLDGSDPLLLYGYGSYEICIDPSFKASRLSLLDRGFIF 513

Query: 61  AIAHVRGGGEMGRQWYENGKFLKKKNTFTDFITCAEYLIGEKYCSKEKLCIEGRSAGGLL 120
           AIAH+RGGGEMGRQWYENGK LKK+NTFTDFI CAEYLI  K+CSKEKLCI+G SAGGLL
Sbjct: 514 AIAHIRGGGEMGRQWYENGKLLKKRNTFTDFIACAEYLIEMKFCSKEKLCIQGGSAGGLL 573

Query: 121 IGSVLNMKPDQFKAAIAGVPFVDVLTTMLDPSIPLTTEEWEEWGDPRVEEFYYYMKSYSP 180
           IG+VLNM+PD FKAA+  VPFVDV+TTMLDPSIPLTT EWEEWGDPR EEFY+YMKSYSP
Sbjct: 574 IGAVLNMRPDLFKAAVTRVPFVDVVTTMLDPSIPLTTSEWEEWGDPRKEEFYFYMKSYSP 633

Query: 181 VDNVKPQNYPNILVTAGLHDPRVMYSEPAKFVAKLRDMKTDDNLLLFKCELGAGHFSKSG 240
           VDN+K QNYP ILVTAGL+DPRVMYSEPAKFVAKLRDMK DDN+LLFKCELGAGHFSKSG
Sbjct: 634 VDNIKAQNYPKILVTAGLNDPRVMYSEPAKFVAKLRDMKMDDNVLLFKCELGAGHFSKSG 693

Query: 241 R 241
           R
Sbjct: 694 R 694


>GSVIVT01034358001 assembled CDS
          Length = 698

 Score =  444 bits (1141), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 206/241 (85%), Positives = 222/241 (92%)

Query: 1   KWATASDGTQIPISVGYRKDLVKIDGSHPLLLYGYGSYEICIDTKFKASRLSLLDRGFIF 60
           KWA A DGTQIPIS+ YRKDLVK+DGS PLLLYGYGSYEIC++  F+ SRLSLLDRGFIF
Sbjct: 429 KWANAQDGTQIPISIVYRKDLVKLDGSDPLLLYGYGSYEICVEAHFQESRLSLLDRGFIF 488

Query: 61  AIAHVRGGGEMGRQWYENGKFLKKKNTFTDFITCAEYLIGEKYCSKEKLCIEGRSAGGLL 120
           AIAH+RGGGEMGRQWYENGK LKKKNTFTDFI CAEYLI  KYCSKEKLCIEGRSAGGLL
Sbjct: 489 AIAHIRGGGEMGRQWYENGKLLKKKNTFTDFIVCAEYLIEIKYCSKEKLCIEGRSAGGLL 548

Query: 121 IGSVLNMKPDQFKAAIAGVPFVDVLTTMLDPSIPLTTEEWEEWGDPRVEEFYYYMKSYSP 180
           IG+VLNM+PD F+AAIAGVPFVDVLTTMLDP+IPLTT EWEEWGDPR EEFY+YMKSYSP
Sbjct: 549 IGAVLNMRPDLFRAAIAGVPFVDVLTTMLDPTIPLTTSEWEEWGDPRKEEFYFYMKSYSP 608

Query: 181 VDNVKPQNYPNILVTAGLHDPRVMYSEPAKFVAKLRDMKTDDNLLLFKCELGAGHFSKSG 240
           VDN+K QNYPNILVTAGL+DPRV+YSEPAK VAKLRD KTDDN+LLFKCE+ AGH SKSG
Sbjct: 609 VDNIKAQNYPNILVTAGLNDPRVLYSEPAKLVAKLRDTKTDDNILLFKCEMAAGHSSKSG 668

Query: 241 R 241
           R
Sbjct: 669 R 669


>GSVIVT01010101001 assembled CDS
          Length = 736

 Score =  201 bits (510), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 104/244 (42%), Positives = 157/244 (64%), Gaps = 4/244 (1%)

Query: 1   KWATASDGTQIPISVGYRKDLVKIDGSHPLLLYGYGSYEICIDTKFKASRLSLLDRGFIF 60
           K   + DG ++P+++ Y ++  K  G  P LL GYG+Y   +D  + + RLSLLDRG++ 
Sbjct: 469 KEVISHDGVEVPLTILYSREAWK-KGLSPGLLQGYGAYGEVLDKAWCSDRLSLLDRGWVV 527

Query: 61  AIAHVRGGGEMGRQWYENGKFLKKKNTFTDFITCAEYLIGEKYCSKEKLCIEGRSAGGLL 120
           A A VRGGG     W++ G  L K N+  DF+ C +YL+ E Y  +++L   G SAGGLL
Sbjct: 528 AFADVRGGGGPDSSWHKCGSGLNKLNSIYDFVLCGKYLVNEGYVHEDQLGAIGFSAGGLL 587

Query: 121 IGSVLNMKPDQFKAAIAGVPFVDVLTTMLDPSIPLTTEEWEEWGDPRVEEFYYYMKSYSP 180
           +G+ +NM PD F+AAI  VPF+D+  T+LDP++PLT  ++EE+G+PRV+  +  + SYSP
Sbjct: 588 VGAAINMCPDMFRAAILKVPFLDICNTLLDPNLPLTLLDYEEFGNPRVQSQFESILSYSP 647

Query: 181 VDNVKPQN-YPNILVTAGLHDPRVMYSEPAKFVAKLRD--MKTDDNLLLFKCELGAGHFS 237
            DN+   + +P++LVTA  +D RV   E AK+VAK+RD    +  + ++ K  +  GHF 
Sbjct: 648 YDNISQGSCHPSVLVTASFYDSRVGVWEAAKWVAKVRDSTCSSCSSGVILKTNMNGGHFG 707

Query: 238 KSGR 241
           + GR
Sbjct: 708 EGGR 711


>GSVIVT01008711001 assembled CDS
          Length = 731

 Score =  161 bits (408), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/248 (36%), Positives = 137/248 (55%), Gaps = 21/248 (8%)

Query: 5   ASDGTQIPISVGYRKDLVKIDGSHPLLLYGYGSYEICIDTKFKASRLSLLDR-GFIFAIA 63
           + DGT+IP+ +  RK+ + +DGSHP LLYGYG + I I   F  SR+ L    G +F IA
Sbjct: 458 SKDGTKIPMFIVARKN-IPMDGSHPCLLYGYGGFNISITPSFSVSRIVLSRHLGAVFCIA 516

Query: 64  HVRGGGEMGRQWYENGKFLKKKNTFTDFITCAEYLIGEKYCSKEKLCIEGRSAGGLLIGS 123
           ++RGGGE G++W+++G   KK+N F DFI+ AEYL+   Y    KLCIEG S GGLL+G+
Sbjct: 517 NIRGGGEYGQEWHKSGSLAKKQNCFDDFISAAEYLVSAGYTQPRKLCIEGGSNGGLLVGA 576

Query: 124 VLNMKPDQFKAAIAGVPFVDVLTTMLDPSIPLTTEEWEEWGDPRVEEFYYYMKSYSPVDN 183
            +N +PD F  A+A V  +D+L         +      ++G    EE ++++  YSP+ N
Sbjct: 577 CINQRPDLFGCALAHVGVMDMLRFH---KFTIGHAWTSDYGCSEKEEEFHWLIKYSPLHN 633

Query: 184 VK---------PQNYPNILVTAGLHDPRVMYSEPAKFVAKLR-------DMKTDDNLLLF 227
           V+         P  YP  ++    HD RV+     K +A ++       +     N ++ 
Sbjct: 634 VRRPWEQSPDQPSQYPATMILTADHDDRVVPLHSLKLLATMQYILCTSVEKSPQTNPIIG 693

Query: 228 KCELGAGH 235
           + E  AGH
Sbjct: 694 RIECKAGH 701


>GSVIVT01005084001 assembled CDS
          Length = 744

 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 71/109 (65%), Gaps = 1/109 (0%)

Query: 3   ATASDGTQIPISVGYRKDLVKIDGSHPLLLYGYGSYEICIDTKFKASRLSLLDRGFIFAI 62
            ++ DG  +P+++ Y +   K + S P +L+G+G+Y   +D +++    SLLDRG++ A 
Sbjct: 535 VSSHDGVLVPLTIVYSRKNKKENHS-PGILHGHGAYGELLDKRWRGELKSLLDRGWVVAY 593

Query: 63  AHVRGGGEMGRQWYENGKFLKKKNTFTDFITCAEYLIGEKYCSKEKLCI 111
           A VRGGG  G++W+ +G+  KK N+  DFI+CA++LI ++    + +C+
Sbjct: 594 ADVRGGGGGGKKWHHDGRRTKKHNSIEDFISCAKFLIDKEIMLCQVICL 642


>GSVIVT01018091001 assembled CDS
          Length = 822

 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/223 (21%), Positives = 87/223 (39%), Gaps = 18/223 (8%)

Query: 23  KIDGSHPLLLYGYGSYEICIDTKFKASRLSLLDRGFIFAIAHVRGGGEMGRQWYENGKFL 82
           K D   PL++  +G       + F  +   L   G+   I + RG    G +  ++    
Sbjct: 583 KNDTCDPLIVVLHGGPHSVSSSSFSKNLAFLSSLGYSLLIVNYRGSLGFGEEALQSLPGK 642

Query: 83  KKKNTFTDFITCAEYLIGEKYCSKEKLCIEGRSAGGLLIGSVLNMKPDQFKAAIAGVPFV 142
                  D +T  +++I    C   K+ + G S GG L   ++   PD+F  A    P  
Sbjct: 643 IGSQDVNDVLTAIDHVIDMGLCDPSKIAVVGGSHGGFLTSHLIGQAPDKFAVAAVRNPVC 702

Query: 143 DVLTTMLDPSIPLTTEEW---EEWGD---------PRVEEFYYYMKSYSPVDNVKPQNYP 190
           ++   +    IP    +W   E +G          P  E+    + S SPV ++     P
Sbjct: 703 NLALMVGTTDIP----DWCFVEAYGSQGKNSFTEAPSAEQL-TLLHSKSPVSHIHKVKTP 757

Query: 191 NILVTAGLHDPRVMYSEPAKFVAKLRDMKTDDNLLLFKCELGA 233
            + +  G  D RV  S    +  +L++   +  +++F  ++ A
Sbjct: 758 TLFLL-GAQDLRVPVSNGLHYARELKEKGVEVKVIIFPNDVHA 799