Jatropha Genome Database

JcCA0151591.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151591.20 - phase: 0 /TE
         (855 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01014104001 assembled CDS                                       311   7e-85
GSVIVT01021646001 assembled CDS                                       177   3e-44
GSVIVT01028612001 assembled CDS                                        66   7e-11
GSVIVT01013589001 assembled CDS                                        63   7e-10
GSVIVT01037631001 assembled CDS                                        62   2e-09
GSVIVT01034745001 assembled CDS                                        51   2e-06

>GSVIVT01014104001 assembled CDS
          Length = 1354

 Score =  311 bits (798), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 159/344 (46%), Positives = 223/344 (64%), Gaps = 3/344 (0%)

Query: 1   MDVSESFLVQFIINSLPLEFGPIQVNYNTLKEKWNIQEIKAMLIQEEGRLKKLKE-YSIN 59
           M + ESFLVQF++NSLP +F P +++YNT  ++WN+ E+ +  IQEE RL++     ++ 
Sbjct: 520 MGMDESFLVQFVLNSLPSQFAPFKIHYNTNSDQWNLNELTSKCIQEEVRLRQEGHNLALA 579

Query: 60  LTFHXXXXXXXXXXXXXXXXRDKAPMKVNEDQIRK-ELKCYFCRKNGHFKKDCPKREIWF 118
           +T                  +   P + +++   K  + CYFC K GH KKDC KR+ WF
Sbjct: 580 VTHGVTKKKGKFKKGRNFPPKKSGPGEGSQNHDGKFTVSCYFCGKKGHVKKDCIKRKAWF 639

Query: 119 KKKGIPYVSVCFESNLIEVPNNTWWLDSGATTHVSHIIQEFLSIQPINKTEKFLYMGNGM 178
           +K+GI    VC+ESNL EVP+NTWW+DSGATTHV++++Q FL+ +   ++EKFLYMGN +
Sbjct: 640 EKRGINLSFVCYESNLAEVPSNTWWIDSGATTHVTNLMQGFLTTRKPKESEKFLYMGNRL 699

Query: 179 KARIKGIRTYRLILDTYYYLDIEKCLYVPECARNLVSVGRLDNIGFNFKICNGVFSFYKH 238
           K  +  + TYRL+L+T + +D+    YVP  +RNLVS+ +LD  G++    +G  S   +
Sbjct: 700 KVEVVAVGTYRLLLETGHRMDLLNTFYVPSISRNLVSLSKLDATGYSVLFSSGQLSLMLN 759

Query: 239 KYYYGFGTLIDSLYHFNLDVEFVESLFNVDYNIGNKHSTHNEFSAFLWHQRLGHISKERI 298
               G G L D LY  +L+ EF ++L  +  N+G+K    NE S+ LWH+RLGHIS+ERI
Sbjct: 760 SVTIGSGILCDGLYKISLNHEFAQALITLHSNVGSKRGLINENSSILWHRRLGHISRERI 819

Query: 299 LMLVKSEILPQLDFTDXDVCIDCIKGKQTKHTLKNPATRSNELL 342
             LVK  IL  LDFTD  VC++CIKGKQTKHT K  ATRSNELL
Sbjct: 820 ERLVKEGILQNLDFTDFHVCVNCIKGKQTKHTKKG-ATRSNELL 862


>GSVIVT01021646001 assembled CDS
          Length = 468

 Score =  177 bits (448), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/269 (37%), Positives = 154/269 (57%), Gaps = 5/269 (1%)

Query: 3   VSESFLVQFIINSLPLEFGPIQVNYNTLKEKWNIQEIKAMLIQEEGRLKKLKEYSINLTF 62
           +SESFLV FI+N+LP ++GP +++YNT K+KW+I E+  M +QEEGRL   +  S+ L  
Sbjct: 193 MSESFLVHFILNTLPPQYGPFKISYNTHKDKWSINELMTMCVQEEGRLMMEQGESVMLVT 252

Query: 63  HXXXXXXXXXXXXXXXXRDKAPMKVNEDQIRKELKCYFCRKNGHFKKDCPKREIWFKKKG 122
                            + K  +    D I+K+ KC+FC+K GH KK C K + W +KKG
Sbjct: 253 QRKGKKGKSQASQ----KGKQQISPKSD-IKKDEKCFFCKKKGHVKKKCLKFQNWLEKKG 307

Query: 123 IPYVSVCFESNLIEVPNNTWWLDSGATTHVSHIIQEFLSIQPINKTEKFLYMGNGMKARI 182
            P   +C+ESN++ V  NTWW+DSG+T H+S+ +Q   +++    +E+F+  GN M + +
Sbjct: 308 NPTSFICYESNMVNVNTNTWWIDSGSTIHISNSLQGMQNLRKPVTSEQFILSGNKMGSHV 367

Query: 183 KGIRTYRLILDTYYYLDIEKCLYVPECARNLVSVGRLDNIGFNFKICNGVFSFYKHKYYY 242
           + I T  L L++ + L+++K  YVP  +RNL+SV RL   G++F      FS        
Sbjct: 368 EAIGTCYLTLNSGFVLELQKTFYVPSFSRNLISVSRLVPFGYSFHFSETSFSLIYKSDCV 427

Query: 243 GFGTLIDSLYHFNLDVEFVESLFNVDYNI 271
           G G L D LY   L  + V +  +V   I
Sbjct: 428 GNGILSDGLYCIFLQNDIVHNSLHVQTGI 456


>GSVIVT01028612001 assembled CDS
          Length = 3048

 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 27/261 (10%)

Query: 93  RKELKCYFCRKNGHFKKDCPKREI--WFKKKGIPYVSVCFESNLIEVPNNTWWLDSGATT 150
           +  ++CY C K GHF  +CP RE   ++ K     + + +         +TW+LDSG + 
Sbjct: 269 KATMECYNCHKLGHFAWECPHRETGAYYAKNQEEMLLMAYVDLNKTSREDTWFLDSGCSN 328

Query: 151 HVSHIIQEFLSIQPINKTEKFLYMGNGMKARIKGIRTYRLILDTYYYLDIEKCLYVPECA 210
           H+      F       +    + +GN     + G    RL ++    + I    YVPE  
Sbjct: 329 HMCGKKDYFSDFDGTFRDS--VKLGNNTSMSVLGKGNVRLKVNEMTQI-ITGVFYVPELK 385

Query: 211 RNLVSVGRLDNIGFNFKICNGVFSFYKHKYYYGFGTLIDSLYHFNLDVEFVESLFNVDYN 270
            NL+S+G+L   G        +F   K K ++    LI       +D +   +   + Y 
Sbjct: 386 NNLLSIGQLQEKGLTI-----LFQHGKCKVFHSQKGLI-------MDTKMSSNRMFMLYA 433

Query: 271 IGNKHS-----THNEFSAFLWHQRLGHISKERILMLVKSEI---LPQLDFTDXDVCIDCI 322
           +    S     T  E    LWH R GH+S + +  L + ++   LPQ       +C DC+
Sbjct: 434 LSQPISSTCFNTVTEDILQLWHCRYGHLSFQGLKTLQQRKMVNGLPQFQPPS-KLCKDCL 492

Query: 323 KGKQTKHTLKNPAT-RSNELL 342
            GKQ + ++   +  R+ E+L
Sbjct: 493 VGKQHRSSIPKKSNWRAAEIL 513


>GSVIVT01013589001 assembled CDS
          Length = 281

 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 2/113 (1%)

Query: 168 TEKFLYMGNGMKARIKGIRTYRLILDTYYYLDIEKCLYVPECARNLVSVGRLDNIGFNFK 227
           +E+ +Y GN M++ ++ + T  L+L + +  D+EK  YVP  +RNL+S+ R+  +G++F 
Sbjct: 39  SEQCIYSGNKMRSHVEAVGTCSLVLSSGFIFDLEKTFYVPSFSRNLISISRVVPLGYSFS 98

Query: 228 ICNGVFSFYKHKYYYGFGTL--IDSLYHFNLDVEFVESLFNVDYNIGNKHSTH 278
                FS +      G GT   +  L  FN       +  +  Y+ G   S++
Sbjct: 99  FYETSFSLFYKSNLVGNGTFKSVSELGLFNRQAPSASTSKSCGYHRGGSSSSY 151


>GSVIVT01037631001 assembled CDS
          Length = 1940

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 38/251 (15%)

Query: 93   RKELKCYFCRKNGHFKKDCPKREIWFKKKGIPYVSVCFESNLIEV-------PNNTWWLD 145
            R ++KC  C K GH ++ C  ++   +++    V  C E  L           + +W +D
Sbjct: 981  RPDVKCNKCGKQGHVERICKNQQ---QEETNAVVDYCQEEQLFAATCFANKSTSKSWLVD 1037

Query: 146  SGATTHVSHIIQEFLSIQPINKTEKFLYMGNGMKARIKGIRTYRLILDTYYYLDIEKCLY 205
            SG T H+++    F  +     T   + +GNG    +KG  T  +   T   L I   L+
Sbjct: 1038 SGCTNHMTNNQDLFRELD--RTTISKVRIGNGEYIPVKGKGTVAIESQTGLKL-IYDVLF 1094

Query: 206  VPECARNLVSVGRLDNIGFNFKICNGVFSFYKHKYYYGFGTLIDSLYH---FNLDVEFVE 262
            VP+  +NL+SVG+L  +   FK+           Y+     +I        FN+ ++   
Sbjct: 1095 VPDIDQNLLSVGQL--VEKEFKV-----------YFEDRNCIIKDAEGKEVFNIKMKGKS 1141

Query: 263  SLFNVDYNIGNKHST--HNEFSAFLWHQRLGHISKERILMLVKSEI---LPQLDFTDXDV 317
               N+   + ++H+     + +   W +R+ H   + +L + K++I   LP L+  D  +
Sbjct: 1142 FALNL---LEDEHTAILQQDSTTMFWDRRVEHFHHDDVLYMKKNQIVEGLPDLE-KDLPI 1197

Query: 318  CIDCIKGKQTK 328
            C  C  GKQTK
Sbjct: 1198 CATCQYGKQTK 1208


>GSVIVT01034745001 assembled CDS
          Length = 2196

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 24/212 (11%)

Query: 140 NTWWLDSGATTHVSHIIQEFLSIQPINKTEKFLYMGNGMKARIKGIRTYRLILDTYYYLD 199
           NTW +DSG T+H++  +  F SI      +  + +GNG   + KG  T  +       + 
Sbjct: 333 NTWLIDSGCTSHMTKYLSIFTSID--RSVQPKVKLGNGEVVQAKGKGTIAISTKRRTKI- 389

Query: 200 IEKCLYVPECARNLVSVGRLDNIGFNFKICNGVFSFYKHKYYYGFGTLIDSLYHFNLDVE 259
           +   LY+P+  +NL+SV ++   G+      G F F  + +      +  +  +F L ++
Sbjct: 390 VTNVLYIPDLDQNLLSVAQMLRNGYAV-FFKGNFCFITNVHGKEIAKIKMNGNNFYLKLD 448

Query: 260 FVES-LFNVDYNIGNKHSTHNEFSAFLWHQRLGHISKERILMLVKS---EILPQLDFTDX 315
            VE  +F+   +            + +WH+R GH + + +  + ++   E +P++     
Sbjct: 449 LVEGHVFSAKID-----------ESVVWHKRYGHFNLKSLRFMQEAGMVEDMPEISVNA- 496

Query: 316 DVCIDCIKGKQTK----HTLKNPATRSNELLS 343
             C  C  GKQ +      +   AT   EL++
Sbjct: 497 QTCESCELGKQQRQPFPQNMSKKATHKLELIN 528