Jatropha Genome Database
- JcCA0150851.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0150851.10 - phase: 1 /pseudo/partial
(733 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01005190001 assembled CDS 1340 0.0
GSVIVT01030588001 assembled CDS 1273 0.0
GSVIVT01037657001 assembled CDS 1268 0.0
GSVIVT01029978001 assembled CDS 67 4e-11
GSVIVT01027922001 assembled CDS 59 8e-09
>GSVIVT01005190001 assembled CDS
Length = 918
Score = 1340 bits (3469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 641/706 (90%), Positives = 667/706 (94%)
Query: 1 NENPFTSILKTLEKPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVKSK 60
+ NPF SILKTLEKP GGEFGKYYSLPAL DPRID+LPYSI+ILLESAIRNCDEFQVK+K
Sbjct: 21 SSNPFASILKTLEKPAGGEFGKYYSLPALGDPRIDRLPYSIRILLESAIRNCDEFQVKAK 80
Query: 61 DVEKIIDWENTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNSLGGDSNKINPLV 120
DVEKIIDWEN+SPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMN LGGDSNKINPLV
Sbjct: 81 DVEKIIDWENSSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGGDSNKINPLV 140
Query: 121 PVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSNAFHNMLVVPPGSGIVH 180
PVDLVIDHSVQVDVA SENAVQANMELEFQRNKERF FLKWGSNAFHNMLVVPPGSGIVH
Sbjct: 141 PVDLVIDHSVQVDVAGSENAVQANMELEFQRNKERFGFLKWGSNAFHNMLVVPPGSGIVH 200
Query: 181 QVNLEYLGRVVFNTNGILYPDSVVGTDSHTTMIDXXXXXXXXXXXXXXXXXMLGQPMSMV 240
QVNLEYLGRVVFNT GILYPDSVVGTDSHTTMID MLGQPMSMV
Sbjct: 201 QVNLEYLGRVVFNTEGILYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMV 260
Query: 241 LPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSELSLADRATIAN 300
LPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGM ELSLADRATIAN
Sbjct: 261 LPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMRELSLADRATIAN 320
Query: 301 MSPEYGATMGFFPVDHVTLQYLKLTGRTDETVCLIESYLRANKMFVDYSEPQIERVYTSY 360
MSPEYGATMGFFPVDHVTLQYLKLTGR DETV +IESYLRAN MFVDYS+PQ+E+VY+SY
Sbjct: 321 MSPEYGATMGFFPVDHVTLQYLKLTGRRDETVSMIESYLRANNMFVDYSQPQVEKVYSSY 380
Query: 361 LELNLEDVEPCVSGPKRPHDRVPLKEMKADWHSCLDSRVGFKGFAIPKESQSKVVEFNFH 420
LELNLEDVEPCVSGPKRPHDRVPLKEMKADWHSCLD++VGFKGFAIPKESQSKVVEF++H
Sbjct: 381 LELNLEDVEPCVSGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAIPKESQSKVVEFSYH 440
Query: 421 GTPAQLKHGDVVIAAITSCTNTSNPSVMLGAALVAKKAFELGLEVKPWVKTSLAPGSGVV 480
GTPAQL+HGDVVIAAITSCTNTSNPSVMLGAALVAKKA ELGLEVKPW+KTSLAPGSGVV
Sbjct: 441 GTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVV 500
Query: 481 TKYLEKSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDEAVASAITENDLVAAAVLSGNRNF 540
TKYLEKSGLQKYLN LGFHIVGYGCTTCIGNSGDI+E+VASAI+END+VAAAVLSGNRNF
Sbjct: 501 TKYLEKSGLQKYLNQLGFHIVGYGCTTCIGNSGDINESVASAISENDMVAAAVLSGNRNF 560
Query: 541 EGRVHPLTRANYLASPPLVVAYALAGTVDIDFETEPIGVGKDGKQIFFRDIWPSNEEVAQ 600
EGRVHPLTRANYLASPPLVVAYALAGTVDIDFE EPIGVGKDGKQIFFRDIWPS EEVA
Sbjct: 561 EGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGVGKDGKQIFFRDIWPSTEEVAN 620
Query: 601 VVQSSVLPDMFKATYEAITKGNPMWNDLSVPSGTLYSWDPASTYIHEPPYFKSMTMSPPG 660
VVQSSVLP MFKATYEAIT+GNPMWN LSVPS TLY+WDP STYIH+PPYFKSMTMSPPG
Sbjct: 621 VVQSSVLPAMFKATYEAITQGNPMWNQLSVPSSTLYTWDPKSTYIHDPPYFKSMTMSPPG 680
Query: 661 PHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAARYLIERGVQQK 706
PHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAARYL+ERGV ++
Sbjct: 681 PHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAARYLMERGVDRR 726
>GSVIVT01030588001 assembled CDS
Length = 987
Score = 1273 bits (3295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/705 (85%), Positives = 647/705 (91%)
Query: 2 ENPFTSILKTLEKPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVKSKD 61
EN F IL L K GGEFGKYYSLPALNDPR+DKLPYSI+ILLESAIRNCD FQV +D
Sbjct: 93 ENAFKGILTGLPKASGGEFGKYYSLPALNDPRVDKLPYSIRILLESAIRNCDNFQVTKED 152
Query: 62 VEKIIDWENTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNSLGGDSNKINPLVP 121
VEKIIDWENTSPKQVEIPFKPARV+LQDFTGVPAVVDLACMRDAMN LG DSNKINPLVP
Sbjct: 153 VEKIIDWENTSPKQVEIPFKPARVILQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVP 212
Query: 122 VDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQ 181
VDLV+DHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGS AFHNMLVVPPGSGIVHQ
Sbjct: 213 VDLVVDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSTAFHNMLVVPPGSGIVHQ 272
Query: 182 VNLEYLGRVVFNTNGILYPDSVVGTDSHTTMIDXXXXXXXXXXXXXXXXXMLGQPMSMVL 241
VNLEYLGRVVFN +G+LYPDSVVGTDSHTTMID MLGQPMSMVL
Sbjct: 273 VNLEYLGRVVFNADGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVL 332
Query: 242 PGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSELSLADRATIANM 301
PGVVGFKL+GKLR+GVTATDLVLTVTQMLRKHGVVGKFVEFYG+GM+ELSLADRATIANM
Sbjct: 333 PGVVGFKLTGKLRNGVTATDLVLTVTQMLRKHGVVGKFVEFYGDGMAELSLADRATIANM 392
Query: 302 SPEYGATMGFFPVDHVTLQYLKLTGRTDETVCLIESYLRANKMFVDYSEPQIERVYTSYL 361
SPEYGATMGFFPVD VTLQYLKLTGR+DETV LIE+YLRANKMFVD++EPQ ER Y+SYL
Sbjct: 393 SPEYGATMGFFPVDRVTLQYLKLTGRSDETVALIEAYLRANKMFVDHNEPQQERAYSSYL 452
Query: 362 ELNLEDVEPCVSGPKRPHDRVPLKEMKADWHSCLDSRVGFKGFAIPKESQSKVVEFNFHG 421
EL+L +VEPCVSGPKRPHDRV LKEMK DWHSCLD++VGFKGFA+PKE+Q KV +F+FHG
Sbjct: 453 ELDLVNVEPCVSGPKRPHDRVTLKEMKVDWHSCLDNKVGFKGFAVPKEAQDKVAKFSFHG 512
Query: 422 TPAQLKHGDVVIAAITSCTNTSNPSVMLGAALVAKKAFELGLEVKPWVKTSLAPGSGVVT 481
PA+LKHG VVIAAITSCTNTSNPSVMLGAALVAKKA ELGLEVKPW+KTSLAPGSGVVT
Sbjct: 513 QPAELKHGSVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVT 572
Query: 482 KYLEKSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDEAVASAITENDLVAAAVLSGNRNFE 541
KYL +SGLQKYLN GFHIVGYGCTTCIGNSG+IDE+VASAITEND+VAAAVLSGNRNFE
Sbjct: 573 KYLLQSGLQKYLNQQGFHIVGYGCTTCIGNSGEIDESVASAITENDIVAAAVLSGNRNFE 632
Query: 542 GRVHPLTRANYLASPPLVVAYALAGTVDIDFETEPIGVGKDGKQIFFRDIWPSNEEVAQV 601
GRVHPLTRANYLASPPLVVAYALAGTVDIDFE EPIG GKDGK ++F+DIWPS EE+A+V
Sbjct: 633 GRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGKDGKSVYFKDIWPSTEEIAEV 692
Query: 602 VQSSVLPDMFKATYEAITKGNPMWNDLSVPSGTLYSWDPASTYIHEPPYFKSMTMSPPGP 661
VQSSVLP+MFK+TYEAITKGN MWNDLSVP+ TLYSWD STYIHEPPYFK+MTM PPG
Sbjct: 693 VQSSVLPNMFKSTYEAITKGNSMWNDLSVPANTLYSWDAKSTYIHEPPYFKNMTMDPPGA 752
Query: 662 HGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAARYLIERGVQQK 706
HGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAA+YL+ERGV +K
Sbjct: 753 HGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRK 797
>GSVIVT01037657001 assembled CDS
Length = 1009
Score = 1268 bits (3282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 601/706 (85%), Positives = 649/706 (91%)
Query: 1 NENPFTSILKTLEKPDGGEFGKYYSLPALNDPRIDKLPYSIKILLESAIRNCDEFQVKSK 60
+E+PF IL ++ KP GGEFGK+YSLPALNDPRIDKLPYSI+ILLESAIRNCD FQV
Sbjct: 114 SEHPFKGILTSVPKPGGGEFGKFYSLPALNDPRIDKLPYSIRILLESAIRNCDNFQVTKD 173
Query: 61 DVEKIIDWENTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNSLGGDSNKINPLV 120
DVEKIIDWENTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMN+LG DSNKINPLV
Sbjct: 174 DVEKIIDWENTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNNLGSDSNKINPLV 233
Query: 121 PVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSNAFHNMLVVPPGSGIVH 180
PVDLVIDHSVQVDV RSENAVQANM+LEFQRNKERF+FLKWGS AF NMLVVPPGSGIVH
Sbjct: 234 PVDLVIDHSVQVDVTRSENAVQANMDLEFQRNKERFSFLKWGSTAFRNMLVVPPGSGIVH 293
Query: 181 QVNLEYLGRVVFNTNGILYPDSVVGTDSHTTMIDXXXXXXXXXXXXXXXXXMLGQPMSMV 240
QVNLEYLGRVVFN +GILYPDSVVGTDSHTTMID MLGQPMSMV
Sbjct: 294 QVNLEYLGRVVFNNDGILYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMV 353
Query: 241 LPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSELSLADRATIAN 300
LPGVVGFKLSGKL GVTATDLVLTVTQMLRKHGVVGKFVEFYGEGM ELSLADRATIAN
Sbjct: 354 LPGVVGFKLSGKLCSGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMGELSLADRATIAN 413
Query: 301 MSPEYGATMGFFPVDHVTLQYLKLTGRTDETVCLIESYLRANKMFVDYSEPQIERVYTSY 360
MSPEYGATMGFFPVDHVTLQYLKLTGR+DETV +IE+YLRAN+MFVDY+EPQ+ER Y+SY
Sbjct: 414 MSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIEAYLRANRMFVDYNEPQVERFYSSY 473
Query: 361 LELNLEDVEPCVSGPKRPHDRVPLKEMKADWHSCLDSRVGFKGFAIPKESQSKVVEFNFH 420
L+LNLEDVEPC+SGPKRPHDRVPLKEMK DW +CLD++VGFKGFA+PKE+Q KV +F+FH
Sbjct: 474 LQLNLEDVEPCMSGPKRPHDRVPLKEMKTDWKACLDNKVGFKGFAVPKEAQDKVAKFSFH 533
Query: 421 GTPAQLKHGDVVIAAITSCTNTSNPSVMLGAALVAKKAFELGLEVKPWVKTSLAPGSGVV 480
G PA+LKHG VVIAAITSCTNTSNPSVMLGA LVAKKA ELGLEVKPW+KTSLAPGSGVV
Sbjct: 534 GQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKASELGLEVKPWIKTSLAPGSGVV 593
Query: 481 TKYLEKSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDEAVASAITENDLVAAAVLSGNRNF 540
TKYL +SGLQKYLN GFHIVGYGCTTCIGNSGD+DE+VASAI+END++AAAVLSGNRNF
Sbjct: 594 TKYLLQSGLQKYLNQQGFHIVGYGCTTCIGNSGDLDESVASAISENDIIAAAVLSGNRNF 653
Query: 541 EGRVHPLTRANYLASPPLVVAYALAGTVDIDFETEPIGVGKDGKQIFFRDIWPSNEEVAQ 600
EGRVH LTRANYLASPPLVVAYALAGTVDIDFE EPIG GKDGK ++F+DIWP++EE+A+
Sbjct: 654 EGRVHALTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGKDGKDVYFKDIWPTSEEIAE 713
Query: 601 VVQSSVLPDMFKATYEAITKGNPMWNDLSVPSGTLYSWDPASTYIHEPPYFKSMTMSPPG 660
VVQSSVLP+MFK+TYEAITKGNP+WN LSV S +LYSWDP STYIHEPPYFK+MTM+PPG
Sbjct: 714 VVQSSVLPEMFKSTYEAITKGNPIWNQLSVHSSSLYSWDPNSTYIHEPPYFKNMTMNPPG 773
Query: 661 PHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAARYLIERGVQQK 706
PHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAA+YLIERGV K
Sbjct: 774 PHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLIERGVAPK 819
>GSVIVT01029978001 assembled CDS
Length = 528
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 172/476 (36%), Gaps = 87/476 (18%)
Query: 111 GDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSNAFHNML 170
G + K+ + ++ DH + + R+ V + ++N + F +K N
Sbjct: 114 GQNAKVWDREKIVIIPDHYIFTNDERANRNVDILRDFCTEQNIKYFYDIK----DLGNFK 169
Query: 171 VVPPGSGIVHQVNLEYLGRVVFNTNGILYPDSVV-GTDSHTTMIDXXXXXXXXXXXXXXX 229
V P G+ H V G P V+ GTDSHT
Sbjct: 170 VNPDYKGVCH---------VALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAG 220
Query: 230 XXMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSE 289
+ + + +P + F + G++ D + A DL+L + + G K +EF G +
Sbjct: 221 FVLGTGKILLKVPPTLRFVMDGEMPDYLLAKDLILQIIGEISVSGATYKSMEFVGSTVES 280
Query: 290 LSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRTDETVCLIESYLRANKMFVDYS 349
L++ +R T+ NM E G G P D T +YL+ D+T E YS
Sbjct: 281 LTMEERMTLCNMVVEAGGKNGVVPADSTTHKYLE-----DKTDVPYEPV---------YS 326
Query: 350 EPQIERVYTSYLELNLEDVEPCVSGPKRPHDRVPLKEMKADWHSCLDSRVGFKGFAIPKE 409
+ Q + S ++ +EP V+ P P +R A+ +E
Sbjct: 327 DEQAR--FLSEYRFDVSKLEPLVAKPHSPDNR-----------------------ALARE 361
Query: 410 SQSKVVEFNFHGTPAQLKHGDVVIAAITSCTNTSNPSVMLGAALVAKKAFELGLEVKPWV 469
+ ++ + G+ K D + AA + S V + LV K W+
Sbjct: 362 CKDVKIDRVYIGSCTGGKTEDFLAAA--KVFHASGKKVKVPTFLVPATQ-------KVWM 412
Query: 470 KTSLAP----GSGVVTKYLEKSGLQKYLNHLGFHIVGYGCTTCIGNSGD----IDEAVAS 521
P G ++ E++G + C C+G D ++E A+
Sbjct: 413 DVYSLPVPGCGGKTCSQIFEEAGCDTPASP--------SCGACLGGPRDTYARMNEPQAN 464
Query: 522 AITENDLVA---------AAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTV 568
I + +A V + NRNF GR+ YLASP A AL G V
Sbjct: 465 VIVKLVCLAVWLFGIHGEVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGFV 520
>GSVIVT01027922001 assembled CDS
Length = 508
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 168/463 (36%), Gaps = 81/463 (17%)
Query: 111 GDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSNAFHNML 170
G++ K+ + ++ +H + R+ V E ++N + F +K N
Sbjct: 114 GENAKVWDREKIVIIPEHYIFTKDERANRNVDILREFCTEQNIKYFYDIK----DLGNFR 169
Query: 171 VVPPGSGIVHQVNLEYLGRVVFNTNGILYPDSVV-GTDSHTTMIDXXXXXXXXXXXXXXX 229
P G+ H V G P V+ GTDSHT
Sbjct: 170 ANPDYKGVCH---------VALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAA 220
Query: 230 XXMLGQPMSMVLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSE 289
+ + + +P + F + G++ + + A DL+L + + G K +EF G +
Sbjct: 221 FVLGTGKILLKVPPTLRFVMDGEMPNYLLAKDLILQIIGEISVSGATYKSMEFVGTTVES 280
Query: 290 LSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRTDETVCLIESYLRANKMFVDYS 349
L++ +R T+ NM E G G P D T +YL+ D+T E YS
Sbjct: 281 LTMEERMTLCNMVIEAGGKNGVVPADSTTHKYLE-----DKTSLPYEPV---------YS 326
Query: 350 EPQIERVYTSYLELNLEDVEPCVSGPKRPHDRVPLKEMKADWHSCLDSRVGFKGFAIPKE 409
+ Q + S ++ +EP V+ P P D+ A+ +E
Sbjct: 327 DEQAR--FLSEYRFDISKLEPLVAKPHSP-DKC----------------------ALARE 361
Query: 410 SQSKVVEFNFHGTPAQLKHGDVVIAAITSCTNTSNPSVMLGAALVAKKAFELGLEVKPW- 468
+ ++ + G+ K D + AA + S V + LV K W
Sbjct: 362 CKDVKIDRVYIGSCTGGKTEDFLAAA--KVFHASGKKVKVPTFLVPATQ-------KVWM 412
Query: 469 -VKTSLAPGSG--VVTKYLEKSGLQKYLNHLGFHIVGYGCTTCIGNSGDIDEAVASAITE 525
V + PG G ++ E++G + C C+G D + + E
Sbjct: 413 DVYSLPVPGCGGKTCSQIFEEAGCDTPASPT--------CGACMGGPRD----TYARMNE 460
Query: 526 NDLVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTV 568
+ V + NRNF GR+ YLASP A AL G V
Sbjct: 461 PQV---CVSTTNRNFPGRMGHKESQIYLASPYTAAASALRGYV 500