Jatropha Genome Database

JcCA0150641.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0150641.10 + phase: 0 /pseudo
         (229 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01021872001 assembled CDS                                       105   1e-23
GSVIVT01021874001 assembled CDS                                       105   2e-23
GSVIVT01021867001 assembled CDS                                       105   2e-23
GSVIVT01021870001 assembled CDS                                       104   4e-23
GSVIVT01021877001 assembled CDS                                       104   4e-23
GSVIVT01038178001 assembled CDS                                       102   1e-22
GSVIVT01021880001 assembled CDS                                       100   4e-22
GSVIVT01021868001 assembled CDS                                        89   2e-18
GSVIVT01026951001 assembled CDS                                        88   3e-18
GSVIVT01029906001 assembled CDS                                        69   2e-12

>GSVIVT01021872001 assembled CDS
          Length = 342

 Score =  105 bits (263), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/157 (42%), Positives = 83/157 (52%), Gaps = 22/157 (14%)

Query: 1   MPASKSLERRVVMRALGAELYLTDPNKGFNEVLRKPEEILKNTPNGYMLDQFVNPTNPKG 60
           MPAS SLERR+++RA GAEL +TDP KGF E LR+ EE+LK  PNGY+L QF NP NP+ 
Sbjct: 99  MPASFSLERRIILRAFGAELIITDPAKGFKEQLRRIEELLKKIPNGYVLQQFENPANPR- 157

Query: 61  LLSFVDSMKPLDQRFGKTREVKLMPRLWE-*GLVAE*LVLGNSLRRKTQRLRCSLSFTCH 119
                         +  T      P +WE  G   + LV G            +  F   
Sbjct: 158 ------------IHYETTG-----PEIWEGSGGKVDALVSGIG---TGGTASGAGKFLKE 197

Query: 120 A*TTFWVYGVEPAESGVLNGGKPGKNLIDGLGAGVIP 156
                 VYGVEP ES VL+GG+   + I G+GAG IP
Sbjct: 198 KNPEIKVYGVEPVESAVLSGGEHAPHKIQGIGAGFIP 234


>GSVIVT01021874001 assembled CDS
          Length = 323

 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/157 (42%), Positives = 85/157 (54%), Gaps = 22/157 (14%)

Query: 1   MPASKSLERRVVMRALGAELYLTDPNKGFNEVLRKPEEILKNTPNGYMLDQFVNPTNPKG 60
           MP+  +LER++V+ A GAELYLTD  KG   V  K EEIL+NTPNGY+L+QF NP NPK 
Sbjct: 99  MPSVVTLERKMVVLAFGAELYLTDIAKGIQGVFDKAEEILQNTPNGYILNQFENPANPK- 157

Query: 61  LLSFVDSMKPLDQRFGKTREVKLMPRLWE-*GLVAE*LVLGNSLRRKTQRLRCSLSFTCH 119
                         +  T      P +W+  G   + LV   +       +  +  F   
Sbjct: 158 ------------IHYETTG-----PEIWKGTGGKVDILV---AGIGTGGTVTGAGHFLKE 197

Query: 120 A*TTFWVYGVEPAESGVLNGGKPGKNLIDGLGAGVIP 156
                 VYG+EPAES VLNGG PG + I G+GAG+IP
Sbjct: 198 KNPEIKVYGIEPAESAVLNGGNPGSHKIQGIGAGIIP 234


>GSVIVT01021867001 assembled CDS
          Length = 325

 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/157 (42%), Positives = 82/157 (52%), Gaps = 22/157 (14%)

Query: 1   MPASKSLERRVVMRALGAELYLTDPNKGFNEVLRKPEEILKNTPNGYMLDQFVNPTNPKG 60
           MPAS SLERR+++RA GAEL LTDP KG    ++K EEIL  TPN Y+L QF NP NPK 
Sbjct: 100 MPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNSYILQQFENPANPK- 158

Query: 61  LLSFVDSMKPLDQRFGKTREVKLMPRLWE-*GLVAE*LVLGNSLRRKTQRLRCSLSFTCH 119
                         +  T      P +W   G   +  V   S       +  +  F   
Sbjct: 159 ------------IHYETTG-----PEIWRGTGGKVDAFV---SGIGTGGTITGAGKFLKE 198

Query: 120 A*TTFWVYGVEPAESGVLNGGKPGKNLIDGLGAGVIP 156
             +   +YGVEP ES VL+GGKPG + I G+GAG IP
Sbjct: 199 QNSDIKLYGVEPVESAVLSGGKPGPHKIQGIGAGFIP 235


>GSVIVT01021870001 assembled CDS
          Length = 323

 Score =  104 bits (259), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/157 (42%), Positives = 83/157 (52%), Gaps = 22/157 (14%)

Query: 1   MPASKSLERRVVMRALGAELYLTDPNKGFNEVLRKPEEILKNTPNGYMLDQFVNPTNPKG 60
           MP+  +LER++V+RA GAELYLTD  KG   V  K +EILKNTPNGY+L+QF NP NPK 
Sbjct: 99  MPSIVNLERKIVVRAFGAELYLTDIAKGIKGVFDKADEILKNTPNGYLLNQFENPANPK- 157

Query: 61  LLSFVDSMKPLDQRFGKTREVKLMPRLWE-*GLVAE*LVLGNSLRRKTQRLRCSLSFTCH 119
                         +  T      P +W+  G   + LV   S          +  F   
Sbjct: 158 ------------IHYETTG-----PEIWKGTGGKVDALV---SGIGTGGTATGAGHFLKE 197

Query: 120 A*TTFWVYGVEPAESGVLNGGKPGKNLIDGLGAGVIP 156
                 VYGVEP ES VLNGG PG + I G+G G+IP
Sbjct: 198 KNPKIKVYGVEPCESAVLNGGTPGPHKILGIGTGIIP 234


>GSVIVT01021877001 assembled CDS
          Length = 323

 Score =  104 bits (259), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 85/157 (54%), Gaps = 22/157 (14%)

Query: 1   MPASKSLERRVVMRALGAELYLTDPNKGFNEVLRKPEEILKNTPNGYMLDQFVNPTNPKG 60
           MP+  +LER++V+ A GAELYLTD  KG   V  K +EIL+NTPNGY+L+QF NP NPK 
Sbjct: 99  MPSVVTLERKMVVLAFGAELYLTDIAKGIQGVFDKADEILQNTPNGYILNQFENPANPK- 157

Query: 61  LLSFVDSMKPLDQRFGKTREVKLMPRLWE-*GLVAE*LVLGNSLRRKTQRLRCSLSFTCH 119
                         +  T      P +W+  G   + LV   +       +  +  F   
Sbjct: 158 ------------IHYETTG-----PEIWKGTGGKVDILV---AGIGTGGTVTGAGHFLKE 197

Query: 120 A*TTFWVYGVEPAESGVLNGGKPGKNLIDGLGAGVIP 156
                 VYG+EPAES VLNGG PG + I G+GAG+IP
Sbjct: 198 KNPEIKVYGIEPAESAVLNGGNPGSHKIQGIGAGIIP 234


>GSVIVT01038178001 assembled CDS
          Length = 382

 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 85/162 (52%), Gaps = 32/162 (19%)

Query: 1   MPASKSLERRVVMRALGAELYLTDPNKGFNEVLRKPEEILKNTPNGYMLDQFVNPTNPK- 59
           MPAS S+ERRV+++A GAEL LTDP KG    ++K EEILK+TPN YML QF NP NPK 
Sbjct: 157 MPASMSMERRVLLKAFGAELVLTDPAKGMKGAVQKAEEILKSTPNAYMLQQFDNPANPKV 216

Query: 60  -----GLLSFVDSMKPLDQRFGKTREVKLMPRLWE*GLVAE*LVLGNSLRRKTQRLRCSL 114
                G   + D+   +D           +              +G  L+++   ++   
Sbjct: 217 HYQTTGPEIWEDTRGKVDIFIAGIGTGGTI------------SGVGKFLKKQNPNIK--- 261

Query: 115 SFTCHA*TTFWVYGVEPAESGVLNGGKPGKNLIDGLGAGVIP 156
                      V GVEP ES +L+GGKPG + I G+GAG +P
Sbjct: 262 -----------VIGVEPLESNILSGGKPGPHKIQGIGAGFVP 292


>GSVIVT01021880001 assembled CDS
          Length = 323

 Score =  100 bits (250), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 84/157 (53%), Gaps = 22/157 (14%)

Query: 1   MPASKSLERRVVMRALGAELYLTDPNKGFNEVLRKPEEILKNTPNGYMLDQFVNPTNPKG 60
           MP+  +LE+++V+ A GAEL+L D  KG   +  K +EIL+NTPNGY L+QF NP NPK 
Sbjct: 99  MPSVATLEKKMVLLAFGAELHLIDMAKGVQALFDKADEILQNTPNGYFLNQFENPANPK- 157

Query: 61  LLSFVDSMKPLDQRFGKTREVKLMPRLWE-*GLVAE*LVLGNSLRRKTQRLRCSLSFTCH 119
                         +  T      P +W+  G   + LV   +       +  +  F   
Sbjct: 158 ------------IHYETTG-----PEVWKGTGGKVDILV---AGIGTGGTITGAGQFLKE 197

Query: 120 A*TTFWVYGVEPAESGVLNGGKPGKNLIDGLGAGVIP 156
                 VYGVEPAES VLNGGKPG + I G+GAG+IP
Sbjct: 198 KNPEIKVYGVEPAESAVLNGGKPGSHQIQGIGAGIIP 234


>GSVIVT01021868001 assembled CDS
          Length = 506

 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 77/155 (49%), Gaps = 21/155 (13%)

Query: 1   MPASKSLERRVVMRALGAELYLTDPNKGFNEVLRKPEEILKNTPNGYMLDQFVNPTNPKG 60
           MPAS S ERR+V+RA G EL+LTDP KG   +  K  E+L+ TP GYML QF NP NPK 
Sbjct: 292 MPASMSRERRIVLRAFGDELHLTDPVKGIKGIHEK-AELLEKTPYGYMLKQFANPANPK- 349

Query: 61  LLSFVDSMKPLDQRFGKTREVKLMPRLWE*GLVAE*LVLGNSLRRKTQRLRCSLSFTCHA 120
            + +  +   + +  G   +V +                  S       +     F    
Sbjct: 350 -IHYETTGTEIWRGCGGKVDVFV------------------SGVGTGGTVTGVGRFLKEK 390

Query: 121 *TTFWVYGVEPAESGVLNGGKPGKNLIDGLGAGVI 155
                VYGVEPAES VLNGG+PG + I G+  G I
Sbjct: 391 NPDIKVYGVEPAESAVLNGGEPGLHKIQGIDPGFI 425


>GSVIVT01026951001 assembled CDS
          Length = 371

 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 78/158 (49%), Gaps = 24/158 (15%)

Query: 1   MPASKSLERRVVMRALGAELYLTDPNKGFNEVLRKPEEILKNTPNGYMLDQFVNPTNPKG 60
           MP+  SLERRV MRA GA+L LTDP KG    ++K  E+L++TP+ +ML QF NP N + 
Sbjct: 144 MPSYTSLERRVTMRAFGADLILTDPTKGMGGTVKKAYELLESTPDAFMLQQFSNPANTQ- 202

Query: 61  LLSFVDSMKPLDQRFGKTREVKLMPRLWE--*GLVAE*LVLGNSLRRKTQRLRCSLSFTC 118
                         F  T      P +WE   G V +  ++G         +   L    
Sbjct: 203 ------------VHFETTG-----PEIWEDTRGQV-DIFIMGIGSGGTVSGVGRYLKSQN 244

Query: 119 HA*TTFWVYGVEPAESGVLNGGKPGKNLIDGLGAGVIP 156
                  +YG+EP ES VLNGGKPG + I G G G  P
Sbjct: 245 ---PNVKIYGLEPTESNVLNGGKPGPHHITGNGVGFKP 279


>GSVIVT01029906001 assembled CDS
          Length = 390

 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 40/59 (67%)

Query: 1   MPASKSLERRVVMRALGAELYLTDPNKGFNEVLRKPEEILKNTPNGYMLDQFVNPTNPK 59
           MPAS  +ERR+++RA GAE+ LTDP KG    + K EEI+++ PN YM  QF N  N K
Sbjct: 176 MPASIDIERRILLRAFGAEIVLTDPMKGIKGAVDKAEEIVQSMPNAYMFQQFDNMANAK 234