Jatropha Genome Database

JcCA0150461.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0150461.10 - phase: 0 
         (498 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01000391001 assembled CDS                                       796   0.0  
GSVIVT01035247001 assembled CDS                                       786   0.0  
GSVIVT01011565001 assembled CDS                                       769   0.0  
GSVIVT01011564001 assembled CDS                                       694   0.0  
GSVIVT01010526001 assembled CDS                                        83   3e-16

>GSVIVT01000391001 assembled CDS
          Length = 487

 Score =  796 bits (2055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/499 (76%), Positives = 428/499 (85%), Gaps = 13/499 (2%)

Query: 1   MVITTTIVDSDELLHSTFASRYVRAPVPRFKIAEKSMPKEAAYQVINDELMLDGNPRLNL 60
           MVI+TTI DS E LH+TFASRYVR P+P+FK+ E+S+PKEAA+Q+I+DELMLDGNPRLNL
Sbjct: 1   MVISTTISDSSEHLHATFASRYVRDPLPKFKMPERSIPKEAAFQIISDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECNDLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFHAPAGEDETAVG 120
           ASFVTTWME EC+ LIMAS+NKNYVDMDEYP+     NRCVNMIAHLF+AP GE+ETA+G
Sbjct: 61  ASFVTTWMEEECDKLIMASVNKNYVDMDEYPLVGPHHNRCVNMIAHLFNAPVGENETAIG 120

Query: 121 VGTVGSSEAIMLSGLAFKRKWQNKRKAQGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180
           VGTVGSSEAIML+GLAFKRKWQ KRK++GKPYDKPNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRKWQQKRKSEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180

Query: 181 VKLTEGNYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVXXXXXXXXXXXXXTGWDTP 240
           VKL EG YVMDPVKAVEMVDENTICVAAILGSTLTGEFEDV             TGW TP
Sbjct: 181 VKLREGYYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNTETGWGTP 240

Query: 241 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWAVWRTKEDLPEEL 300
           IHVDAASGGFIAPFL+PDLEWDFRLPLVKSINVSGHKYGLVYAGVGW VWRTK+DLPEEL
Sbjct: 241 IHVDAASGGFIAPFLHPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPEEL 300

Query: 301 IFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKKIIENCMENTMLLKKGIEK 360
           IFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYK I+ NCM+N  +LK+G+ +
Sbjct: 301 IFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMTNCMDNANVLKQGLVE 360

Query: 361 TDRFDIVSKDIGVPLVAFSLKDSSKYTVFEVSENLRRFGWIIPAYTMPADAEHIAVLRVV 420
           T RF+IVSKDIGVPLVAFSLKD+S YTVF++S NLRR+GWIIPAYTMP DAEHIAVLRVV
Sbjct: 361 TGRFEIVSKDIGVPLVAFSLKDTSNYTVFDISNNLRRYGWIIPAYTMPPDAEHIAVLRVV 420

Query: 421 VREDLSRSLAERLVSHIGQVLKEMDLLPVHISSQTAIVNKTLQDSEGKKIVKKSEREMQE 480
           VRED SRSLAERL+S I +V++EMD +    +++   +N            KK+  E +E
Sbjct: 421 VREDFSRSLAERLLSDIEKVMREMDAVQSRATTRATHLN------------KKTVMENRE 468

Query: 481 EVTQYWKKLVEGKRV-GVC 498
           E+  YWK++V+ K+  GVC
Sbjct: 469 EIAMYWKRVVDRKKTSGVC 487


>GSVIVT01035247001 assembled CDS
          Length = 488

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/500 (75%), Positives = 422/500 (84%), Gaps = 14/500 (2%)

Query: 1   MVITTTIVDSDELLHSTFASRYVRAPVPRFKIAEKSMPKEAAYQVINDELMLDGNPRLNL 60
           M ++ T  +S+  +HSTFASRYVR  +PRFKI E S+PKEAAYQ+INDELMLDGNPRLNL
Sbjct: 1   MALSETASESNASIHSTFASRYVRVSLPRFKIPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECNDLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFHAPAGEDETAVG 120
           ASFVTTWMEPEC+ LIMASINKNYVDMDEYPVTTELQNRCVNMIAHLF+AP GE E AVG
Sbjct: 61  ASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGESEAAVG 120

Query: 121 VGTVGSSEAIMLSGLAFKRKWQNKRKAQGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180
           VGTVGSSEAIML+GLAFKRKWQNKRKA+GKP+DKPNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPHDKPNIVTGANVQVCWEKFARYFEVELKE 180

Query: 181 VKLTEGNYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVXXXXXXXXXXXXXTGWDTP 240
           VKLT+G YVMDPVKAVEMVDENTICVAAILGSTL GEFEDV             TGWDTP
Sbjct: 181 VKLTDGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKHLNDLLTKKNKETGWDTP 240

Query: 241 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWAVWRTKEDLPEEL 300
           IHVDAASGGFIAPFL+P+LEWDFRLPLVKSINVSGHKYGLVYAG+GW +WR+KEDLP+EL
Sbjct: 241 IHVDAASGGFIAPFLHPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPDEL 300

Query: 301 IFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKKIIENCMENTMLLKKGIEK 360
           IFHINYLG+DQPTFTLNFSKGSSQ+IAQYYQ IRLG EGY+ I+ENC EN  +LK+G+EK
Sbjct: 301 IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNIMENCQENARVLKEGLEK 360

Query: 361 TDRFDIVSKDIGVPLVAFSLKDSSKYTVFEVSENLRRFGWIIPAYTMPADAEHIAVLRVV 420
           T  F+IVSK+ GVPLVAFSLKD+S +  FEVS+ LRR+GWI+PAYTMP DA+H+ VLRVV
Sbjct: 361 TGHFNIVSKENGVPLVAFSLKDNSCHNEFEVSDMLRRYGWIVPAYTMPPDAQHVTVLRVV 420

Query: 421 VREDLSRSLAERLVSHIGQVLKEMDLLPVHISSQTAIVNKTLQDSEGKKIVKKSEREMQE 480
           +RED SR+LAERLV+ I +VL E+D LP  I+++    N            KKSE E Q 
Sbjct: 421 IREDFSRTLAERLVTDIQKVLYELDTLPAKITAKVQQSN------------KKSEIETQR 468

Query: 481 EVTQYWKKLVEGKRV--GVC 498
           E+T+ WKK V  K+   GVC
Sbjct: 469 EITEAWKKFVREKKKTNGVC 488


>GSVIVT01011565001 assembled CDS
          Length = 462

 Score =  769 bits (1987), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/459 (78%), Positives = 405/459 (88%)

Query: 1   MVITTTIVDSDELLHSTFASRYVRAPVPRFKIAEKSMPKEAAYQVINDELMLDGNPRLNL 60
           MV++ T  +SD  +HSTFASRYV+A +PRFK+ E S+PKEAAYQ+INDELMLDGNPRLNL
Sbjct: 1   MVLSKTASESDVSVHSTFASRYVKASLPRFKLPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECNDLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFHAPAGEDETAVG 120
           ASFVTTWMEPEC+ L+MA+INKNYVDMDEYPVTTELQNRCVN+IAHLF+AP  + E AVG
Sbjct: 61  ASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIAHLFNAPLEDSEAAVG 120

Query: 121 VGTVGSSEAIMLSGLAFKRKWQNKRKAQGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180
           VGTVGSSEAIML+GLAFKRKWQNKRKA+GKPYDKPNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180

Query: 181 VKLTEGNYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVXXXXXXXXXXXXXTGWDTP 240
           VKL +G YVMDP KAVEMVDENTICVAAILGSTL GEFEDV             TGWDTP
Sbjct: 181 VKLRDGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKQTGWDTP 240

Query: 241 IHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWAVWRTKEDLPEEL 300
           IHVDAASGGFIAPFLYP+LEWDFRLPLVKSINVSGHKYGLVYAG+GW VWR+KEDLPEEL
Sbjct: 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRSKEDLPEEL 300

Query: 301 IFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKKIIENCMENTMLLKKGIEK 360
           IFHINYLG+DQPTFTLNFSKGSSQ+IAQYYQ IRLGFEGY+ ++ENC EN M LK+G+EK
Sbjct: 301 IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCQENAMALKEGLEK 360

Query: 361 TDRFDIVSKDIGVPLVAFSLKDSSKYTVFEVSENLRRFGWIIPAYTMPADAEHIAVLRVV 420
           T RF+I+SKD GVPLVAFSLKD+S +  FEV++ LRRFGWI+PAYTMP DA+H+ VLRVV
Sbjct: 361 TGRFNIISKDNGVPLVAFSLKDNSCHDEFEVADMLRRFGWIVPAYTMPPDAQHVTVLRVV 420

Query: 421 VREDLSRSLAERLVSHIGQVLKEMDLLPVHISSQTAIVN 459
           VRED SR+LAERLV  I +VL E+D+LP  +S++ +  N
Sbjct: 421 VREDFSRTLAERLVFDITKVLHELDMLPAKLSAKISKTN 459


>GSVIVT01011564001 assembled CDS
          Length = 567

 Score =  694 bits (1791), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/429 (75%), Positives = 374/429 (87%), Gaps = 2/429 (0%)

Query: 18  FASRYVRAPVPRFKIAEKSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECNDLIM 77
           FASRYV+ P PR+K+ EKS+PKEAAYQ+++DEL+LDG PRLNLA+FVTTWMEPEC+ L+ 
Sbjct: 21  FASRYVQDPPPRYKMPEKSIPKEAAYQIVHDELLLDGLPRLNLATFVTTWMEPECDKLMA 80

Query: 78  ASINKNYVDMDEYPVTTELQNRCVNMIAHLFHAP-AGEDETAVGVGTVGSSEAIMLSGLA 136
            +INKNYVDMDEYPVTTELQNRCVNMIA LF+AP A + + AVGVGTVGSSEA+ML+GLA
Sbjct: 81  EAINKNYVDMDEYPVTTELQNRCVNMIAKLFNAPSADQTKQAVGVGTVGSSEAMMLAGLA 140

Query: 137 FKRKWQNKRKAQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLTEGNYVMDPVKAV 196
           FK+KWQNKRKAQ KP+DKPNIVTGANVQVCWEKFARYFEVELKEVKL EG YVMDPVKAV
Sbjct: 141 FKKKWQNKRKAQKKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLREGYYVMDPVKAV 200

Query: 197 EMVDENTICVAAILGSTLTGEFEDVXXXXXXXXXXXXXTGWDTPIHVDAASGGFIAPFLY 256
           EMVDENTICVAAILGST  GEFEDV             TGWDTPIHVDAASGGF+APFLY
Sbjct: 201 EMVDENTICVAAILGSTFNGEFEDVKLLNTLLTQKNKRTGWDTPIHVDAASGGFVAPFLY 260

Query: 257 PDLEWDFRLPLVKSINVSGHKYGLVYAGVGWAVWRTKEDLPEELIFHINYLGSDQPTFTL 316
           P+LEWDFRLPLVKSINVSGHKYGLVYAGVGWA+WR+KE+LPEELIFHINYLG D+PTFTL
Sbjct: 261 PELEWDFRLPLVKSINVSGHKYGLVYAGVGWAIWRSKEELPEELIFHINYLGGDEPTFTL 320

Query: 317 NFSKGSSQIIAQYYQFIRLGFEGYKKIIENCMENTMLLKKGIEKTDRFDIVSKDIGVPLV 376
           NFSKGSSQ+IAQYYQF+R+GFEGYKK++ NCME+  +L++G+EKT RF I+SK+ GVP+V
Sbjct: 321 NFSKGSSQVIAQYYQFLRMGFEGYKKVMSNCMESARILREGLEKTGRFQIISKEKGVPVV 380

Query: 377 AFSLK-DSSKYTVFEVSENLRRFGWIIPAYTMPADAEHIAVLRVVVREDLSRSLAERLVS 435
           AF+ K +  K   F +S+ LR +GWI+PAYTMPA+AE++ VLRVVVRED  R L E+L+ 
Sbjct: 381 AFAFKGNDRKNLAFGLSKALRNYGWIVPAYTMPANAENVTVLRVVVREDFGRQLVEKLLF 440

Query: 436 HIGQVLKEM 444
           HIG  LKE+
Sbjct: 441 HIGVALKEV 449


>GSVIVT01010526001 assembled CDS
          Length = 529

 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 153/364 (42%), Gaps = 32/364 (8%)

Query: 81  NKNYVDMDEYPVTTELQNRCVNMIAHLFHAPAGEDETA-----VGVGTVGSSEAIMLSGL 135
           + N + MD +      +   V M A L     G  E A      G  T G +E+I+L+ +
Sbjct: 145 HTNPLHMDVFQSVVRFEVEVVAMTAALL----GSKEKASGGQICGNMTSGGTESILLA-V 199

Query: 136 AFKRKWQNKRKAQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLTEGNYVMDPVKA 195
              R +   ++       +P ++   +    ++K A+YF ++L  V + +  +  D    
Sbjct: 200 KTSRDYMKAKRG----ITRPEMIIPESAHSAYDKAAQYFNIKLLRVPVNK-EFQADVKGI 254

Query: 196 VEMVDENTICVAAILGSTLTGEFEDVXXXXXXXXXXXXXTGWDTPIHVDAASGGFIAPFL 255
              +++NTI +         G  + +             + +    HVD   GGF+ PF 
Sbjct: 255 RRHINKNTILIVGSAPGFPHGIIDPIEELGELA------SSFGICFHVDLCLGGFVLPFA 308

Query: 256 ----YPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWAVWRTKEDLPEELIFHINYLGSDQ 311
               YP   +DF +  V SI+V  HKYGL   G    ++R  +    + +    + G   
Sbjct: 309 RKLGYPIPPFDFSVEGVTSISVDVHKYGLAPKGTSVVLYRNHDIRKHQFVAVTEWSGGLY 368

Query: 312 PTFTLNFSKGSSQIIAQYYQFIRLGFEGYKKIIENCMENTMLLKKGIEKTDRFDIVSKDI 371
            + T+  S+  + I   +   I LG EGY       ME +  L++GI+      ++ +  
Sbjct: 369 VSPTIAGSRPGALIAGAWAAMISLGQEGYLNNTRETMEVSKKLQRGIKDIPELFVIGRP- 427

Query: 372 GVPLVAFSLKDSSKYTVFEVSENLRRFGWIIPAYTMPADAEHIAVL--RVVVREDLSRSL 429
            + +VAF    S+   +FEV++ L   GW + A   P ++ HI +    V + ED  + L
Sbjct: 428 DMTIVAFG---SNVVDIFEVNDILSSKGWHLNALQRP-NSIHICLTLQHVTILEDFLKDL 483

Query: 430 AERL 433
            E +
Sbjct: 484 KESV 487