Jatropha Genome Database

JcCA0149941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0149941.10 - phase: 0 
         (875 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01028251001 assembled CDS                                      1468   0.0  
GSVIVT01031567001 assembled CDS                                       134   2e-31
GSVIVT01026719001 assembled CDS                                       106   4e-23
GSVIVT01036116001 assembled CDS                                        62   2e-09
GSVIVT01018103001 assembled CDS                                        51   2e-06

>GSVIVT01028251001 assembled CDS
          Length = 874

 Score = 1468 bits (3801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 708/875 (80%), Positives = 774/875 (88%), Gaps = 1/875 (0%)

Query: 1   MSNPPQSSSGYPLIVTPATTDTSTPQSEKSPIPPSPPLLAGAPRFPSPNLQQDQIPSPSI 60
           M+NPPQ S GY   +TP   D  T + EK+ IPP  P    A RFP P LQQ+QIPSPS 
Sbjct: 1   MANPPQPSLGYSGSLTPTQPDAPTLRPEKNSIPPPFPSPVAA-RFPPPRLQQEQIPSPST 59

Query: 61  RTPNLLSPANGVKTGSPIPHLSTPPGPPVFTSPVRPAAVPFRTSPATPQPVAFXXXXXXX 120
           RTPNLLSP NGVKTGSPIPHLSTPPGPPVF+SP+RPAAVPFRTSPATPQPVA        
Sbjct: 60  RTPNLLSPVNGVKTGSPIPHLSTPPGPPVFSSPLRPAAVPFRTSPATPQPVAISSSSSLP 119

Query: 121 XXXXXHFSNGSAELQHQVPESAEDTLPIGELPCVLFSAHKVLKQKKLANVPSLGFGALIS 180
                ++SNGSAELQH+V ++ E++L + + P VLFSA KVLK+KK ANVPSLGFGAL+S
Sbjct: 120 TSSPPYYSNGSAELQHRVSDATEESLHLEKSPYVLFSADKVLKRKKQANVPSLGFGALVS 179

Query: 181 PGREISPGPQIIQRDPHRCQNCGAYSNLYSKILLGSGQWQCVLCRTLNGSGGEYIAPSKE 240
           PGREISPGPQ+IQRDPHRCQNCGAY+NLY  ILLGSGQWQC +CR LNGSGGEY+A SKE
Sbjct: 180 PGREISPGPQVIQRDPHRCQNCGAYANLYCNILLGSGQWQCAICRNLNGSGGEYVATSKE 239

Query: 241 DLRNFPEMSSPMVDYVQTGNKRPGFIPVSDSRMSAPIILVIDDCLDEPHLQHLQSSLHAF 300
           +L N+PE+SSPMVDYVQTGNKRPGFIPV D R+SAPI+LVID+CLDE HLQHLQSSLHAF
Sbjct: 240 ELLNYPELSSPMVDYVQTGNKRPGFIPVGDLRISAPIVLVIDECLDEAHLQHLQSSLHAF 299

Query: 301 VDSLPPTARIGIILYGRTVSVYDFSEESMASADVLPGDKSPSQESLKALIYGTGVYLSPM 360
           VDSLPPT RIGI+LYGRTVSVYDFSE+S ASADVLPGDKSP+Q+SLK+LIYGTG+YLS +
Sbjct: 300 VDSLPPTTRIGIVLYGRTVSVYDFSEDSFASADVLPGDKSPTQDSLKSLIYGTGIYLSAI 359

Query: 361 HASKEVAHQIFSSLRPYKLNIAEASRDRCLGTAVEVALGIIQGPSAEMSRGVVKRAGGNS 420
           HAS  V H IFSSLRPYKLN+ EASRDRCLGTAVEVAL IIQGPSAE+SRG+VKR+GGNS
Sbjct: 360 HASLPVIHTIFSSLRPYKLNLPEASRDRCLGTAVEVALRIIQGPSAEISRGIVKRSGGNS 419

Query: 421 RIIVCAGGPNTYGPGSVPHSFSHPNYPHMEKMALKWMEHLGHEAHRHNTVVDILCAGTCP 480
           RIIVCAGGPNTYGPGSVPHS SHPNYPHMEK ALKWMEHLG EAHR NTVVDILCAGTCP
Sbjct: 420 RIIVCAGGPNTYGPGSVPHSLSHPNYPHMEKSALKWMEHLGQEAHRQNTVVDILCAGTCP 479

Query: 481 VRVPVLQPLAKASGGVLVLHDDFGEAFGVNLQRASSRASGSQGLLEIRCSNDILITQVVG 540
           VRVP+LQPLAKASGG LVLHDDFGEAFGVNLQRAS+RA+GS GL EIRCS+DILITQVVG
Sbjct: 480 VRVPILQPLAKASGGALVLHDDFGEAFGVNLQRASTRAAGSHGLFEIRCSDDILITQVVG 539

Query: 541 PGEEAHIDTHETFKNDMSLSIQMLSVEETQSFALSMETKGDIKNDFVYFQFAIQYSSIYQ 600
           PGEEAH D HETFKND SLSIQMLSVEETQSFALSMETKGDIK+D+V+FQFAIQYS++YQ
Sbjct: 540 PGEEAHTDAHETFKNDTSLSIQMLSVEETQSFALSMETKGDIKSDYVFFQFAIQYSNVYQ 599

Query: 601 ADISRVITVRLPAVDSISTYLESVQDEVAAILIAKRTLLRAKNYSDAVDMRATIDERIKD 660
           ADISRVITVRLP VDS+S YL SVQD+VAA+LIAKRTLL+AKNYSDA+DMRATIDER+KD
Sbjct: 600 ADISRVITVRLPTVDSVSAYLGSVQDDVAAVLIAKRTLLQAKNYSDAIDMRATIDERVKD 659

Query: 661 IALKFGSQVPKSKLHRFPKELSSLPEFLFHLRRGPLLGSIVGHEDERSVLRNLFLNASFD 720
           I +KFGSQ+PKSKL+RFPKELS LPE LFHLRRGPLLGSIVGHEDERSVLRNLFLNASFD
Sbjct: 660 ITIKFGSQLPKSKLYRFPKELSVLPEHLFHLRRGPLLGSIVGHEDERSVLRNLFLNASFD 719

Query: 721 LSLRMVAPRCLMHREGGTFEELPAYDLAMQSNTAVVLDHGTNVFIWLGSELAADEGRSXX 780
           LSLRM+APRCLMHREGGTFEELPAYDLAMQS+ AVVLDHGT+VFIWLG+ELAADEG+S  
Sbjct: 720 LSLRMIAPRCLMHREGGTFEELPAYDLAMQSDAAVVLDHGTDVFIWLGAELAADEGKSAS 779

Query: 781 XXXXXXXXXXXXXXXXFPAPRILAFKEGSSQARYFVSRLIPAHKDPPYEQEARFPQLRSL 840
                           FPAPRILAFKEGSSQARYFVSRLIPAHKDPPYEQEARFPQLR+L
Sbjct: 780 ALAACRTLAEELTESRFPAPRILAFKEGSSQARYFVSRLIPAHKDPPYEQEARFPQLRTL 839

Query: 841 TTEQRTKLKCSFIHFDDPSFCEWMRGLKVVPPEPS 875
           T +QR KLK SF+HFDDPSFCEWMRGLK+VPPEPS
Sbjct: 840 TADQRVKLKSSFLHFDDPSFCEWMRGLKLVPPEPS 874


>GSVIVT01031567001 assembled CDS
          Length = 707

 Score =  134 bits (336), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 158/674 (23%), Positives = 266/674 (39%), Gaps = 90/674 (13%)

Query: 196 PHRCQNCGAYSNLYSKILLGSGQWQCVLCRTLNGSGGEYIAPSKEDLRNFPEMSSPMVDY 255
           P RC+ C +  N + ++   +  W C  C   N     Y   S+    N P    P    
Sbjct: 40  PLRCKTCISLLNPFCRVDFAAKIWICPFCFQRNHFPHHYSMISES---NLPGELYPQYTT 96

Query: 256 VQTGNKRPGFIPVSDSRMSAPIILVIDDCLDEPHLQHLQSSLHAFVDSLPPTARIGIILY 315
           V+     PG      + +    + V+D C+ E  L  ++S+L   +  LP  A +G + +
Sbjct: 97  VEYSLSNPG------ASIPPVFLFVLDTCMIEEELGFVKSALKRAIGLLPENALVGFVSF 150

Query: 316 GRTVSVYDFSEESMASADVLPGDKSPSQESLKALIYGTGVYLSPMHASKEVAHQIFSSLR 375
           G        ++E      V  G  S           G   +L P    +   + +   L+
Sbjct: 151 G--------TQEISKDQGVQNGYASS----------GVTRFLLPASDCEYTLNSLLDELQ 192

Query: 376 PYKLNIAEASRD-RCLGTAVEVALGIIQGPSAEMSRGVVKRAGGNSRIIVCAGGPNTYGP 434
             +  +    R  RC G A+ VA G++               G  +RII   GGP T GP
Sbjct: 193 TDQWPVQPGHRALRCTGVALSVAAGLLGAC----------LPGTGARIIALVGGPCTEGP 242

Query: 435 GS-VPHSFSHPNYPHME---------KMALKWMEHLGHEAHRHNTVVDILCAGTCPVRVP 484
           G+ V    S P   H +         K A+++ E++  +      V+D+  +    V V 
Sbjct: 243 GTIVSKDLSDPVRSHKDLDKDAAPYFKKAVQFYENIAKQMVSQGHVLDLFASALDQVGVA 302

Query: 485 VLQPLAKASGGVLVLHDDFGEA-FGVNLQRASSRASGSQGL-----LEIRCSNDILITQV 538
            ++ + + +GG++VL + FG + F  + +R       S GL     LEI CS DI I  +
Sbjct: 303 EMKVVVERTGGLVVLAESFGHSVFKDSFKRIFEEGEQSLGLSFNGTLEINCSKDIKIQGI 362

Query: 539 VGPG---EEAHIDTHETFKNDMS-LSIQMLSVEETQSFALSMETKGDIK-------NDFV 587
           +GP    E+      +T   + S  S +M  +++T    +  +     +       N  +
Sbjct: 363 IGPCTSLEKKGPSVADTVIGEGSTTSWKMCGLDKTTCLTVFFDISSSERSNPPGTSNPQL 422

Query: 588 YFQFAIQYSSIYQADISRVITVRLPAVDSISTYLESVQ---DEVAAILIAKRTLLRAKNY 644
           Y QF + Y +       RV TV    VDS  +  E VQ    E AA+++A+ T L+ +  
Sbjct: 423 YLQFIVSYQNPEGQTRLRVTTVTRRWVDSAVSSEELVQGFDQETAAVVMARLTSLKMET- 481

Query: 645 SDAVDMRATIDERIKDIALKFGSQVPKSKLHRFPKE--LSSLPEFLFHLRRGPLLGSIVG 702
            +  D    +D  +  +  KFG    K     F      S  P+F+F+LRR   +     
Sbjct: 482 EEGFDATRWLDRSLIRLCSKFG-DYRKDDPASFTLNPCFSLFPQFMFNLRRSQFVQVFNN 540

Query: 703 HEDERSVLRNLFLNASFDLSLRMVAPRCLMHREGGTFEELPA---YDLA---------MQ 750
             DE +  R L    +   +  M+ P  + +    +F  LPA    D+A         + 
Sbjct: 541 SPDETAYFRMLLNRENIPNTAVMIQPSLISY----SFNSLPAPALLDVASISADRILLLD 596

Query: 751 SNTAVVLDHGTNVFIW--LGSELAADEGRSXXXXXXXXXXXXXXXXXXFPAPRILAFKEG 808
           S  +VV+ HG  +  W  +G +   +                      FP PR++   + 
Sbjct: 597 SYFSVVIFHGMTIAQWRNMGYQNQPEHQAFAQLLQAPQDDAKLIIHDRFPVPRLVVCDQH 656

Query: 809 SSQARYFVSRLIPA 822
            SQAR+ +++L P+
Sbjct: 657 GSQARFLLAKLNPS 670


>GSVIVT01026719001 assembled CDS
          Length = 800

 Score =  106 bits (265), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 156/753 (20%), Positives = 281/753 (37%), Gaps = 149/753 (19%)

Query: 187 PGPQIIQRDPHRCQNCGAYSNLYSKILLGSGQWQCVLCRTLNGSGGEYIAPSKEDL--RN 244
           P   ++   P RC+ C +  N ++ +   +  W C  C   N     Y + S  +L    
Sbjct: 45  PSMPVLPYTPLRCRTCRSVLNPFAIVDFSAKLWICPFCFQRNHFPAHYSSISDLNLPAEL 104

Query: 245 FPEMSSPMVDYVQTGNKRPGFIPVSDSRMSAPIILVIDDCLDEPHLQHLQSSLHAFVDSL 304
           FP  ++  ++Y    +  P  +P+         +LV+D CL E  +  L+S+L   +D +
Sbjct: 105 FPNYTT--LEYESPSDATP--VPMV-------FMLVVDTCLIEEEMGFLKSALAQAMDLV 153

Query: 305 PPTARIGIILYGRTVSVYDFSEESMASADVLPGDKSPSQESLKALIY--------GTGV- 355
           P  + +G+I +G  V V++     ++ + V  G K  S++ L   +          TGV 
Sbjct: 154 PDNSLVGMITFGTYVQVHELGFGHVSKSYVFKGTKDVSKDQLLEQMNFFARKPRPTTGVV 213

Query: 356 --------------YLSPMHASKEVAHQIFSSLRPYKLNI-AEASRDRCLGTAVEVALGI 400
                         +L P+   +     +   L+     + A+    RC  TA+ VA  +
Sbjct: 214 AGSRDGLSAESIARFLLPVAECEFALDSVLEELQKDPWPVPADQRAVRCTSTALSVAASL 273

Query: 401 IQGPSAEMSRGVVKRAGGNSRIIVCAGGPNTYGPGSVPHSF------SHPNY-----PHM 449
           +               G  +RI+   GGP+T G G++          SH +      PH 
Sbjct: 274 LGACVP----------GSGARIMAFIGGPSTEGAGAIVSKILSEPIRSHKDLDKDSAPHY 323

Query: 450 EKMALKWMEHLGHEAHRHNTVVDILCAGTCPVRVPVLQPLAKASGGVLVLHDDFGEA-FG 508
            K A+K+ E L  +      V+D+       V V  L+   + +GG++VL + FG A F 
Sbjct: 324 HK-AVKFYEGLAKQLVHQGHVLDLFACALDQVGVAELKIAVERTGGIVVLAESFGHAVFR 382

Query: 509 VNLQRASSRAS-----GSQGLLEIRCSNDILITQVVGPG----EEAHIDTHETFKNDMSL 559
            +L+             S G+ EI CS DI +  ++GP     ++  + +        + 
Sbjct: 383 DSLKHVFQSTDYDLGLSSNGIFEINCSKDIKVQGIIGPCASLEKKGPLCSDTVVGQGNTS 442

Query: 560 SIQMLSVEETQSFALSME-TKGDI--------KNDFVYFQFAIQYS-------------- 596
           + ++  +++  S  L  +  K DI         N F YFQF   Y               
Sbjct: 443 AWKLCGLDKDTSLCLIFDVVKKDIPDAIGQSTSNQF-YFQFLTYYQHGNGQMRLRVTTLS 501

Query: 597 --------------------------------SIYQADISRVITVRLPAVDSISTYLESV 624
                                            I + +  ++  VR+   D I+ +    
Sbjct: 502 RRWIAGPGSIQAIFPRSEIPYYKQMITHHHILKIGKLNKQKITKVRVSLRDLIAGF---- 557

Query: 625 QDEVAAILIAKRTLLRAKNYSDAVDMRATIDERIKDIALKFGS-QVPKSKLHRFPKELSS 683
             E AA+++A+    + +  ++   +R  +D  +  +  +FG  Q             S 
Sbjct: 558 DQETAAVVMARVVSFKMETEAEFDPIR-WLDRSLIQLCSRFGDYQKDNPSSFSLSPRFSI 616

Query: 684 LPEFLFHLRRGPLLGSIVGHEDERSVLRNLFLNASFDLSLRMVAPRCLMHREGGTFEELP 743
            P+F+FHLRR   +       DE +  R +    +   S+ M+ P  + +    +F   P
Sbjct: 617 FPQFIFHLRRSQFVQVFNNSPDETAYFRMILNRENVANSVVMIQPSLISY----SFHSGP 672

Query: 744 ----------AYD--LAMQSNTAVVLDHGTNVFIW--LGSELAADEGRSXXXXXXXXXXX 789
                     A D  L + S   VV+ HG  +  W   G +   +               
Sbjct: 673 EPALLDVAAIAADRILLLDSYFTVVVFHGATIAQWRNAGYQNQPEHEVFAQLLRAPRDDA 732

Query: 790 XXXXXXXFPAPRILAFKEGSSQARYFVSRLIPA 822
                  FP PR++   +  SQAR+ +++L P+
Sbjct: 733 DAIIKERFPVPRLVICDQHGSQARFLLAKLNPS 765


>GSVIVT01036116001 assembled CDS
          Length = 744

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 141/367 (38%), Gaps = 57/367 (15%)

Query: 198 RCQNCGAYSNLYSKILLGSGQWQCVLCRTLNGSGGEYIAPSKEDLRNFPEMSSPMVDYVQ 257
           RC+NC AY N Y +  L    W C LC TLNG   E I    +  ++  EM S  +D   
Sbjct: 52  RCENCWAYFNTYCE--LEQWAWNCSLCGTLNGLTSEAITRYSQP-QSCAEMMSSFIDLE- 107

Query: 258 TGNKRPGFIPVSDSRMSA----PI-ILVIDDCLDEPHLQHLQSSLHAFVDSLPPTARIGI 312
                   +PV  S   A    P+ +  ID    E  L+ ++SSL A +++L P A  G+
Sbjct: 108 --------LPVEGSEGEAMQARPVYVAAIDLSSSEEFLELIKSSLLAALEALGPGALFGL 159

Query: 313 ILYGRTVSVYDFSEESMASADV-LPGDKSPS----QESLKALIYGTGVYLSPMHASKEVA 367
             +   + +YD         +V +P D   S     E +  L+     +L+P+   K+  
Sbjct: 160 ATFSHKIGLYDVQGPVPVVKNVFVPADSDASLPIELEDVMPLL----SFLAPVETCKDRI 215

Query: 368 HQIFSSLRPYKLNIAEASRDRCLGTAVEVALGIIQGPSAEMSRGVVKRAGGN-------- 419
                +L+P         R    G  ++   GI+ G       GV   A  N        
Sbjct: 216 ASALETLKP----TTSWERTSAAGQGLD---GILLGGRG---FGVAMEALFNYLGSEYGS 265

Query: 420 ----SRIIVCAGGPNTYGPGSVPHSFSHPNYPHMEKMALK--------WMEHLGHEAHRH 467
               +R+     GP  YG G +        Y    + A +        + + L   A + 
Sbjct: 266 TFALARVFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQA 325

Query: 468 NTVVDILCAGTCPVRVPVLQPLAKASGGVLVLHDDFGEA-FGVNLQRASSRASGSQGLLE 526
              VDI         +  L+ L+  SGG L L+ +  ++    ++ R  SR      +L 
Sbjct: 326 GVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYSNTDDSTLPQDMYRMLSRPYAFGCILR 385

Query: 527 IRCSNDI 533
           +R S++ 
Sbjct: 386 LRTSSEF 392


>GSVIVT01018103001 assembled CDS
          Length = 966

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 107/266 (40%), Gaps = 49/266 (18%)

Query: 191 IIQRDPHRCQNCGAYSNLYSKILLGSGQWQCVLCRTLNGSGGEYIAPSKEDLRNFPEMSS 250
           ++Q DP  C  CGA S                  R+ +G G E   P++     FP  S+
Sbjct: 48  LLQYDPLICSRCGANS----------------FPRSYSGIG-ENNLPAEL----FPTYST 86

Query: 251 PMVDYVQTGNKRPGFIPVSDSRMSAP-IILVIDDCLDEPHLQHLQSSLHAFVDSLPPTAR 309
             V+Y    +     +  +DSR+  P  + V+D C     L+ L++ L   +  LP    
Sbjct: 87  --VEYQLVSSFSSSSLSGADSRVLGPAFVFVVDACSAAEELRALKNELLHVLAQLPENTM 144

Query: 310 IGIILYGRTVSVYDFSEESMASADVLPGDKSPSQESLKALIYGTGVYLSPMHASKEVAHQ 369
           +G++ +   V V+D      +   +  GD+  S + ++  +  T      +  +     Q
Sbjct: 145 VGLVTFDSMVCVHDLCFAECSRVVLFHGDRELSSDQIQEFLGITRTKQQQLGKTPTAEKQ 204

Query: 370 IFSS-LRPYKLNIAEASRD--------------RCLGTAVEVALGIIQGPSAEMSRGVVK 414
            F   +   + +I  A  +              R  G A+  A+G+++G    +++G   
Sbjct: 205 TFLVPVSECEFSITTAIEEIHSSVQVLPGHRPLRSTGAAISAAIGLLEG--CLVNKG--- 259

Query: 415 RAGGNSRIIVCAGGPNTYGPGSVPHS 440
                SRI+V   GP T GPG + +S
Sbjct: 260 -----SRIMVFTSGPATVGPGIIVNS 280