Jatropha Genome Database

JcCA0149861.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0149861.10 + phase: 0 
         (484 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01032092001 assembled CDS                                       520   e-148
GSVIVT01033317001 assembled CDS                                       480   e-136
GSVIVT01025266001 assembled CDS                                       479   e-135
GSVIVT01032091001 assembled CDS                                       461   e-130
GSVIVT01030279001 assembled CDS                                       303   1e-82
GSVIVT01023938001 assembled CDS                                       295   2e-80
GSVIVT01024198001 assembled CDS                                        54   2e-07

>GSVIVT01032092001 assembled CDS
          Length = 536

 Score =  520 bits (1340), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 276/408 (67%), Positives = 312/408 (76%), Gaps = 11/408 (2%)

Query: 75  SMLEKLEKGTSTNNDEEKDSIPNDDCKAVTCKSPSFTDGKSINDKPTKKNGKRNIPSAST 134
           +MLE LE+G ST + E K S+P D        +P  + G    +K   K  KR+IPSAST
Sbjct: 137 AMLEILEEG-STKDSEMKASMPED--------APCVSTGG--RNKAKSKREKRHIPSAST 185

Query: 135 ALIVGGILGLVQAILLIFCAKPLLHIMGVKSDSPMHTPARKYLTLRALGSPAVLLSLAMQ 194
           AL++GG+LGL+Q + LIF AKPLL  MGVKS SPM  PA KYLTLR+LG+PAVLLSLAMQ
Sbjct: 186 ALVIGGLLGLIQTLFLIFAAKPLLSFMGVKSGSPMLPPALKYLTLRSLGAPAVLLSLAMQ 245

Query: 195 GVFRGFKDTKTPLYATVAGDVTNIILDPIFIFTCRLGVSGAAIAHVLSQYLISLILLWRL 254
           GVFRGFKDTKTPLYATVAGD+TNIILDPIFIF CRLG+SGAAIAHV+SQYLISLILL +L
Sbjct: 246 GVFRGFKDTKTPLYATVAGDLTNIILDPIFIFVCRLGISGAAIAHVISQYLISLILLLKL 305

Query: 255 MKKVDLLPPSAKDLQFSRFLKNGFLLLARVIAATICVTLAASRAARLGATPMAAFQVCLQ 314
           M +V+LLPP  KDLQF RFLKNGFLLL RVIA T CVTLAAS AARLG+ PMAAFQ+CLQ
Sbjct: 306 MTRVNLLPPRLKDLQFHRFLKNGFLLLWRVIAVTFCVTLAASLAARLGSIPMAAFQICLQ 365

Query: 315 VWLTSSLLADGLAVAGQAIIACAFAEKDYQKATTAATRVLQMSXXXXXXXXXXXXXXXXX 374
           VWLTSSLLADGLAVAGQAI+ACAFAEKDY KAT AATRVLQM+                 
Sbjct: 366 VWLTSSLLADGLAVAGQAILACAFAEKDYGKATAAATRVLQMTFVLGLGLALLVGVGLKF 425

Query: 375 XDGIFSKDPHVLHIISIGIPFVAATQPINSIAFVFDGVNFGASDFXXXXXXXXXXXXXXX 434
             G+F++DP+VL +ISI IPF+AATQPIN +AFVFDGVNFGASDF               
Sbjct: 426 GAGVFTRDPNVLQLISISIPFIAATQPINCLAFVFDGVNFGASDFAYTAYSMILVSILSI 485

Query: 435 XXXLFLSKTGGFVGIWVALTIFMGLRTFAGVWRMGTGTGPWKFLRGRL 482
               +LSKT GFVGIWVALTI+M LR  AG+WRMGTGTGPW FLRG+ 
Sbjct: 486 ASLFYLSKTNGFVGIWVALTIYMVLRILAGIWRMGTGTGPWHFLRGQF 533


>GSVIVT01033317001 assembled CDS
          Length = 507

 Score =  480 bits (1235), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 247/403 (61%), Positives = 299/403 (74%), Gaps = 6/403 (1%)

Query: 78  EKLEKGTSTNNDEEKDSIPNDDCKAVTCKSPSFTDGKSINDKPTKKNGKRNIPSASTALI 137
           E LEKG + +N+ E + IP+ D       SPS T   + N +   ++ +R+IPSAS+AL+
Sbjct: 111 ENLEKGLAIDNEME-ELIPHIDS---MHNSPSRTVNNTKNME--FEHERRHIPSASSALV 164

Query: 138 VGGILGLVQAILLIFCAKPLLHIMGVKSDSPMHTPARKYLTLRALGSPAVLLSLAMQGVF 197
           +GG+LGL+QA+ LIF AK +L+ MGV S SPM  PA +YLTLR+LG+PAVLLSLAMQGVF
Sbjct: 165 IGGVLGLIQALFLIFSAKSILNFMGVNSGSPMLAPAMQYLTLRSLGAPAVLLSLAMQGVF 224

Query: 198 RGFKDTKTPLYATVAGDVTNIILDPIFIFTCRLGVSGAAIAHVLSQYLISLILLWRLMKK 257
           RGFKDTKTPLYAT+ GDV NIILDPI +F  RLGVSGAAIAHV+SQYLIS+ILLWRLM+K
Sbjct: 225 RGFKDTKTPLYATILGDVANIILDPILMFVFRLGVSGAAIAHVISQYLISVILLWRLMRK 284

Query: 258 VDLLPPSAKDLQFSRFLKNGFLLLARVIAATICVTLAASRAARLGATPMAAFQVCLQVWL 317
           VDLLPPS KDLQ  RFL+NG LLL RVIA T CVTLAAS AARLG+T MAAFQVCLQ+WL
Sbjct: 285 VDLLPPSIKDLQLGRFLRNGSLLLVRVIAVTFCVTLAASLAARLGSTSMAAFQVCLQIWL 344

Query: 318 TSSLLADGLAVAGQAIIACAFAEKDYQKATTAATRVLQMSXXXXXXXXXXXXXXXXXXDG 377
            +SLLADGLAVAGQAI+A AFA+KDY KAT  A+RVLQ+                     
Sbjct: 345 ATSLLADGLAVAGQAILASAFAKKDYDKATATASRVLQLGLVLGLVLSVFLLVVLQYASR 404

Query: 378 IFSKDPHVLHIISIGIPFVAATQPINSIAFVFDGVNFGASDFXXXXXXXXXXXXXXXXXX 437
           +F+KD +VL ++++GIPFVA TQPIN++AFVFDGVNFGASDF                  
Sbjct: 405 VFTKDVNVLQLMNLGIPFVAVTQPINALAFVFDGVNFGASDFAYSACSMVLVAIVSILCL 464

Query: 438 LFLSKTGGFVGIWVALTIFMGLRTFAGVWRMGTGTGPWKFLRG 480
             LS + GF+GIW+AL+I+M LRT +G WR+ TG+GPW FLR 
Sbjct: 465 FILSSSLGFIGIWIALSIYMSLRTMSGFWRIWTGSGPWSFLRA 507


>GSVIVT01025266001 assembled CDS
          Length = 513

 Score =  479 bits (1233), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 257/422 (60%), Positives = 305/422 (72%), Gaps = 8/422 (1%)

Query: 60  SAFLAEVATAHVILAS--MLEKLEKGTSTNNDEEKDSIPNDDCKAVTCKSPSFTDGKSIN 117
           ++F+AE  T  ++ +   + + +E G++ N  E K  IP    +    +        S +
Sbjct: 97  TSFVAEEDTIGILDSEPEVSKSVEMGSAVNG-ETKKLIPKGSGE----RPYDLEMHGSGH 151

Query: 118 DKPTKKNGKRNIPSASTALIVGGILGLVQAILLIFCAKPLLHIMGVKSDSPMHTPARKYL 177
           D P K   KR+IPSAS AL+VGGILGL+QAI LI  AKP+L+ MGV SDSPM  PA++YL
Sbjct: 152 DTP-KFESKRHIPSASAALVVGGILGLIQAIFLISGAKPILNFMGVHSDSPMLAPAQEYL 210

Query: 178 TLRALGSPAVLLSLAMQGVFRGFKDTKTPLYATVAGDVTNIILDPIFIFTCRLGVSGAAI 237
           TLR+LG+PAVLLSLAMQGVFRGFKDTKTPLYATVAGDVTNIILDPIF+F   +GV GAAI
Sbjct: 211 TLRSLGAPAVLLSLAMQGVFRGFKDTKTPLYATVAGDVTNIILDPIFMFVFHMGVGGAAI 270

Query: 238 AHVLSQYLISLILLWRLMKKVDLLPPSAKDLQFSRFLKNGFLLLARVIAATICVTLAASR 297
           AHV+SQY+IS+IL W+LM++V+LLPPS K L+F RFLKNG LLL RVIA T CVTLAAS 
Sbjct: 271 AHVISQYIISVILFWKLMQQVELLPPSTKVLRFGRFLKNGLLLLMRVIAVTFCVTLAASL 330

Query: 298 AARLGATPMAAFQVCLQVWLTSSLLADGLAVAGQAIIACAFAEKDYQKATTAATRVLQMS 357
           AAR G T MAAFQVCLQVWL +SLLADGLAVAGQAI+A AFA++DY KAT AA+RVLQ+ 
Sbjct: 331 AARQGPTSMAAFQVCLQVWLATSLLADGLAVAGQAILASAFAKQDYSKATAAASRVLQLG 390

Query: 358 XXXXXXXXXXXXXXXXXXDGIFSKDPHVLHIISIGIPFVAATQPINSIAFVFDGVNFGAS 417
                               +F+KD  VLH+ISIGIPFVA TQPINS+AFVFDGVNFGAS
Sbjct: 391 LVLGLVLSSILGTGMQSAAKLFTKDLSVLHLISIGIPFVAVTQPINSLAFVFDGVNFGAS 450

Query: 418 DFXXXXXXXXXXXXXXXXXXLFLSKTGGFVGIWVALTIFMGLRTFAGVWRMGTGTGPWKF 477
           DF                    LS + GFVGIWVALTI++ LR FAG WR+GTG+GPW F
Sbjct: 451 DFAYSAYSMVLVAIVSILCLFILSSSFGFVGIWVALTIYVTLRAFAGFWRIGTGSGPWSF 510

Query: 478 LR 479
           LR
Sbjct: 511 LR 512


>GSVIVT01032091001 assembled CDS
          Length = 542

 Score =  461 bits (1185), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 253/344 (73%), Positives = 275/344 (79%), Gaps = 3/344 (0%)

Query: 76  MLEKLEKGTSTNNDEEKDSIPNDDCKAVTCKSPSFTDGKSINDKPTKKNGKRNIPSASTA 135
           +LE LEKG S  N E K+ IP DD K  T K PS +   S N    KK  +R+IPSASTA
Sbjct: 142 ILENLEKG-SNPNSEMKELIPEDDLKTTTYKPPSVST-VSPNRVKLKKE-RRHIPSASTA 198

Query: 136 LIVGGILGLVQAILLIFCAKPLLHIMGVKSDSPMHTPARKYLTLRALGSPAVLLSLAMQG 195
           L++G  LGL Q I LIF AKPLL  MGVKS S M TPAR+YLTLRALG+PAVLLSLAMQG
Sbjct: 199 LVIGSFLGLFQTIFLIFAAKPLLSFMGVKSGSSMLTPARRYLTLRALGAPAVLLSLAMQG 258

Query: 196 VFRGFKDTKTPLYATVAGDVTNIILDPIFIFTCRLGVSGAAIAHVLSQYLISLILLWRLM 255
           VFRGFKDTKTPLYATV GD+TNIILDPIFIF C+LGVSGAAIAHV+SQYLISLILL RLM
Sbjct: 259 VFRGFKDTKTPLYATVVGDLTNIILDPIFIFVCKLGVSGAAIAHVISQYLISLILLLRLM 318

Query: 256 KKVDLLPPSAKDLQFSRFLKNGFLLLARVIAATICVTLAASRAARLGATPMAAFQVCLQV 315
           K+VDLLPPS KDLQF RFLKNG LLL RVIAAT CVTLAAS AARLG+TPMAAFQ+CLQV
Sbjct: 319 KEVDLLPPSLKDLQFRRFLKNGVLLLGRVIAATFCVTLAASLAARLGSTPMAAFQICLQV 378

Query: 316 WLTSSLLADGLAVAGQAIIACAFAEKDYQKATTAATRVLQMSXXXXXXXXXXXXXXXXXX 375
           W+TSSLLADGLAVAGQAI+ACAFAE DY KAT AATRVLQM                   
Sbjct: 379 WMTSSLLADGLAVAGQAILACAFAENDYAKATNAATRVLQMGFILGLGLALLVGLGLQFG 438

Query: 376 DGIFSKDPHVLHIISIGIPFVAATQPINSIAFVFDGVNFGASDF 419
             +FSKD +VLH+ISIG+PFVAATQPINS+AFVFDGVNFGASDF
Sbjct: 439 AKVFSKDVNVLHLISIGVPFVAATQPINSLAFVFDGVNFGASDF 482


>GSVIVT01030279001 assembled CDS
          Length = 558

 Score =  303 bits (776), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 156/373 (41%), Positives = 225/373 (60%), Gaps = 3/373 (0%)

Query: 109 SFTDGKSINDKPTKKNGKRN---IPSASTALIVGGILGLVQAILLIFCAKPLLHIMGVKS 165
           S ++ +SI       NG +    +PS ST+L +   +G+ +A+ L   +  L++IMG+  
Sbjct: 175 SKSENESIQIGQDHVNGHKRKMLLPSVSTSLALAAGIGIAEAVALSVGSGFLMNIMGIPV 234

Query: 166 DSPMHTPARKYLTLRALGSPAVLLSLAMQGVFRGFKDTKTPLYATVAGDVTNIILDPIFI 225
           DSPM  PA ++LTLRA G+P ++++LA QG FRGFKDTKTPLYA  AG++ N ILDPI I
Sbjct: 235 DSPMRVPAEQFLTLRAFGAPPIVIALAAQGTFRGFKDTKTPLYAVGAGNLLNAILDPILI 294

Query: 226 FTCRLGVSGAAIAHVLSQYLISLILLWRLMKKVDLLPPSAKDLQFSRFLKNGFLLLARVI 285
           F   LG+ GAAI+ V+S+YLI+ +LLW L  KV L+ P+   ++ +++LK+G LL+ R +
Sbjct: 295 FLLGLGIGGAAISTVISEYLIAFVLLWELNDKVFLISPNIDGMRIAQYLKSGGLLIGRTL 354

Query: 286 AATICVTLAASRAARLGATPMAAFQVCLQVWLTSSLLADGLAVAGQAIIACAFAEKDYQK 345
           A    +TLA S AA+ G  PMA  Q+CLQVWL  SLL D LA++GQA++A  +++ +Y++
Sbjct: 355 AVLATMTLATSMAAKEGPIPMAGHQICLQVWLAISLLTDALALSGQALLASGYSQGNYEE 414

Query: 346 ATTAATRVLQMSXXXXXXXXXXXXXXXXXXDGIFSKDPHVLHIISIGIPFVAATQPINSI 405
           A     +VL+M                     +F+ D  VL I   GI FVA +QP+N+I
Sbjct: 415 AQQVIYKVLEMGLATGIALAVILFLGFGAFASLFTTDLEVLGIAWSGILFVAGSQPMNAI 474

Query: 406 AFVFDGVNFGASDFXXXXXXXXXXXXXXXXXXLFLSKTGGFVGIWVALTIFMGLRTFAGV 465
           AFV DG+ +G SDF                  L  +   G  G+W  L +FM LR  AG+
Sbjct: 475 AFVIDGLYYGVSDFGYAAYSMVLVALISSVFLLLAAPVCGLAGVWTGLFLFMTLRVVAGI 534

Query: 466 WRMGTGTGPWKFL 478
           WR+ T +GPWK +
Sbjct: 535 WRLSTKSGPWKMI 547


>GSVIVT01023938001 assembled CDS
          Length = 604

 Score =  295 bits (756), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 161/393 (40%), Positives = 227/393 (57%), Gaps = 8/393 (2%)

Query: 88  NDEEKDSIPNDDCKAVTCKSPSFTDGKSINDKPTKKNGKR-NIPSASTALIVGGILGLVQ 146
            D  K++I N         S  F   +S N  P     +R  + S STAL++   +G+ +
Sbjct: 203 EDISKNAINNS-------ASEEFYQEESTNGTPFVGVTERMQLSSVSTALLLAVGIGIFE 255

Query: 147 AILLIFCAKPLLHIMGVKSDSPMHTPARKYLTLRALGSPAVLLSLAMQGVFRGFKDTKTP 206
           A  L F +   L++MG+   S MH PAR++L+LRALG+PAV++SLA+QG+ RGFKDTKTP
Sbjct: 256 AFALYFGSGWFLNLMGIPLASSMHAPARRFLSLRALGAPAVVVSLALQGILRGFKDTKTP 315

Query: 207 LYATVAGDVTNIILDPIFIFTCRLGVSGAAIAHVLSQYLISLILLWRLMKKVDLLPPSAK 266
           +     G+   + L PI ++  +LGV+GAAI+ V+SQY+++ +++W L K+  LLPP   
Sbjct: 316 VLCLGVGNFAAVFLFPILMYYFQLGVTGAAISTVVSQYIVTFLMIWHLNKRAVLLPPKMG 375

Query: 267 DLQFSRFLKNGFLLLARVIAATICVTLAASRAARLGATPMAAFQVCLQVWLTSSLLADGL 326
            LQF  ++K+G  LL R +A    +TLA S AAR G   MA  Q+CLQVWL  SLL D L
Sbjct: 376 TLQFGDYIKSGGFLLGRTLAVLATMTLATSVAARQGPIAMAGHQICLQVWLAVSLLTDAL 435

Query: 327 AVAGQAIIACAFAEKDYQKATTAATRVLQMSXXXXXXXXXXXXXXXXXXDGIFSKDPHVL 386
           A + QA+IA + ++ DY+        VL+                      IF+KD  VL
Sbjct: 436 AASAQAMIASSLSKGDYKAVKEITYFVLKTGLFTGIFLAVALSAFYGSLATIFTKDIEVL 495

Query: 387 HIISIGIPFVAATQPINSIAFVFDGVNFGASDFXXXXXXXXXXXXXXXXXXLFLSKTGGF 446
            I+  G+ FV A+QPINS+AF+FDG++FGASDF                  L++    G 
Sbjct: 496 GIVRTGVLFVCASQPINSLAFIFDGLHFGASDFPYAARSMMVIGAICSAFLLYVPSLLGL 555

Query: 447 VGIWVALTIFMGLRTFAGVWRMGTGTGPWKFLR 479
            G+W+ LT+FMGLR  AGV R+ + TGPW FL 
Sbjct: 556 QGVWLGLTLFMGLRMVAGVIRLASKTGPWWFLH 588


>GSVIVT01024198001 assembled CDS
          Length = 621

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/362 (21%), Positives = 137/362 (37%), Gaps = 15/362 (4%)

Query: 122 KKNGKRNIPSASTALIVGGILGLVQAILLIFCAKPLLHIMGVKSDSPMHTPARKYLTLRA 181
           +K+ K      S  L +G   G++    + F     L       ++ +   A  Y+ +R 
Sbjct: 249 RKDKKEVQHQISILLFIGLACGVLMLFFMKFLGAWALTAFTGPKNAHLVPAANTYVQIRG 308

Query: 182 LGSPAVLLSLAMQGVFRGFKDTKTPLYATVAGDVTNIILDPIFIFTCRLGVSGAAIAHVL 241
           L  PAVL+    Q    G KD+  PL A       N+    +       G++GAA A ++
Sbjct: 309 LAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAVNVTGHVVLCTLLGYGIAGAAWATMV 368

Query: 242 SQYLISLILLWRLMKK----VDLLPPSAKD-LQFSRFLKNGFL-LLARVIAATICVTLAA 295
           SQ + + +++  L KK      +  PS  + LQ  +     F+ ++++V   ++ +  A 
Sbjct: 369 SQVIAAYMMIEALNKKGFKAYSISVPSPSELLQIFKLAAPVFVTMVSKVSFYSLIIYFAT 428

Query: 296 SRAARLGATPMAAFQVCLQVWLTSSLLADGLAVAGQAIIACAF--AEKDYQKATTAATRV 353
           S    +G   +AA QV +Q++    +  + L+   Q+ +       ++   KA T    +
Sbjct: 429 S----MGTHTVAAHQVMIQMYSMCVVWGEPLSQTAQSFMPELMYGVDRSLSKAQTLLKSL 484

Query: 354 LQMSXXXXXXXXXXXXXXXXXXDGIFSKDPHVLHII-SIGIPFVAATQPINSIAFVFDGV 412
           L +                     IF+ DP V+  +  + IPF  A   +       +G 
Sbjct: 485 LIIGVILGLLLGIVGTSVPALFPNIFTPDPSVMQQMHKVLIPFFFALA-VTPCTHSLEGT 543

Query: 413 NFGASDFXXXXXXXXXXXXXXXXXXLFLSKTG-GFVGIWVALTIFMGLRTFAGVWRMGTG 471
                D                     +S +G G  G W AL  F   R F  + R+ + 
Sbjct: 544 LLAGRDLKFLSLSMSGCFTLGAIILWLVSNSGYGLPGCWCALVGFQWARFFLSLRRLLSP 603

Query: 472 TG 473
            G
Sbjct: 604 NG 605