Jatropha Genome Database

JcCA0148171.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0148171.10 - phase: 0 /partial
         (331 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01021313001 assembled CDS                                       563   e-161
GSVIVT01014092001 assembled CDS                                       495   e-140
GSVIVT01020754001 assembled CDS                                       146   1e-35
GSVIVT01011634001 assembled CDS                                       144   4e-35
GSVIVT01021260001 assembled CDS                                       140   1e-33
GSVIVT01013122001 assembled CDS                                       118   4e-27
GSVIVT01007789001 assembled CDS                                       105   4e-23
GSVIVT01020215001 assembled CDS                                        99   3e-21
GSVIVT01031857001 assembled CDS                                        65   4e-11

>GSVIVT01021313001 assembled CDS
          Length = 487

 Score =  563 bits (1451), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 269/331 (81%), Positives = 286/331 (86%)

Query: 1   MNLVSYEFVACQASKKGVLILSEFXXXXXXXXXXXXXVNPWNITEVAASIGYALNMPADE 60
           MNLVSYEFVACQASKKGVLILSEF             VNPWNITEVAASIGYALNMPADE
Sbjct: 75  MNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGYALNMPADE 134

Query: 61  REKRHNHNFRHVTTHTSQEWAATFMSELNDTIVEAQLRTRQVLPLLPIKVAVERYSQSNN 120
           REKRH HNF HVTTHTSQEWA TF+SELNDTI EAQLRTRQV PLLP K A+ERY QSNN
Sbjct: 135 REKRHWHNFMHVTTHTSQEWALTFVSELNDTIFEAQLRTRQVPPLLPTKDAIERYLQSNN 194

Query: 121 RLLILGFSSTLTEPVDSLDRRGDQLKEMXXXXXXXXXXXXXXXCEDQKTTVVVLSGSDRN 180
           RLLILGF+STLTEPVD   RRG Q+KEM               C+D KTTV++LSGSDR 
Sbjct: 195 RLLILGFNSTLTEPVDIPGRRGGQIKEMELKLHPDLKEPLKKLCDDPKTTVIILSGSDRG 254

Query: 181 ILDENFGEYDMWLAAEHGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHF 240
           +LD+NF EY+MWLAAE+GMFLRLTTGEWMTTMP+NLNMDWVDSVKHVFEYFTERTPRSHF
Sbjct: 255 VLDDNFSEYNMWLAAENGMFLRLTTGEWMTTMPDNLNMDWVDSVKHVFEYFTERTPRSHF 314

Query: 241 DLRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNAAVDVVQGGRSVEVRAVGVTKGA 300
           +LRETSLVWNYKYAD+EFGR+QARDMLQHLWTGPISNA+VDVVQGGRSVEVRAVGVTKGA
Sbjct: 315 ELRETSLVWNYKYADIEFGRLQARDMLQHLWTGPISNASVDVVQGGRSVEVRAVGVTKGA 374

Query: 301 AIDRILGEIVHNRGMKTPIDYVLCVGHFLTK 331
           AIDRILGEIVHNRGMK PIDYVLC+GHFL K
Sbjct: 375 AIDRILGEIVHNRGMKAPIDYVLCIGHFLGK 405


>GSVIVT01014092001 assembled CDS
          Length = 880

 Score =  495 bits (1274), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 241/332 (72%), Positives = 265/332 (79%), Gaps = 1/332 (0%)

Query: 1   MNLVSYEFVACQASKKGVLILSEFXXXXXXXXXXXXXVNPWNITEVAASIGYALNMPADE 60
           MNLVSYEFVACQ SKKGVLILSEF             VNPWNITEVA+SI  ALNMP +E
Sbjct: 465 MNLVSYEFVACQESKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIAQALNMPPEE 524

Query: 61  REKRHNHNFRHVTTHTSQEWAATFMSELNDTIVEAQLRTRQVLPLLPIKVAVERYSQSNN 120
           REKRH HNF HV  HT+QEWA TF+SELNDT+VEA LR R+V P L  + A++ Y QSNN
Sbjct: 525 REKRHEHNFEHVKNHTAQEWAETFVSELNDTVVEADLRKRKVPPRLTPENAIKCYLQSNN 584

Query: 121 RLLILGFSSTLTEPVDSLDRRG-DQLKEMXXXXXXXXXXXXXXXCEDQKTTVVVLSGSDR 179
           RLLILGF+ TLTEPVD+   RG DQ+KEM                 D KTT+VVLSGSDR
Sbjct: 585 RLLILGFNVTLTEPVDTPGSRGGDQIKEMDLKLHPELKGPLTALGNDPKTTIVVLSGSDR 644

Query: 180 NILDENFGEYDMWLAAEHGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSH 239
            +LD+NFGE+DMWLAAE+GMFLR T GEWMTTMPE+LNM+WVDSVKHVFEYFTERTPRS 
Sbjct: 645 TVLDDNFGEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSQ 704

Query: 240 FDLRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNAAVDVVQGGRSVEVRAVGVTKG 299
              RETSLVWNYKYAD EFG++QARDMLQHLWTGPISNA+VDVVQG RSVEVRAVGVTKG
Sbjct: 705 LQKRETSLVWNYKYADAEFGKLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKG 764

Query: 300 AAIDRILGEIVHNRGMKTPIDYVLCVGHFLTK 331
           AAIDRILGEIVHN+ M +PIDYVLC GHFL K
Sbjct: 765 AAIDRILGEIVHNKSMTSPIDYVLCAGHFLGK 796


>GSVIVT01020754001 assembled CDS
          Length = 782

 Score =  146 bits (369), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 169/356 (47%), Gaps = 47/356 (13%)

Query: 1   MNLVSYEFVACQ-------------ASKKGVLILSEFXXXXXXXXXXXXXVNPWNITEVA 47
           MNL  YE++ C+               KK +L+LSEF             VNPWN+   A
Sbjct: 370 MNLTPYEYIVCRQGTDDSESSSDLSGPKKSMLVLSEFIGCSPSLSGAIR-VNPWNVEATA 428

Query: 48  ASIGYALNMPADEREKRHNHNFRHVTTHTSQEWAATFMSELNDTIVEAQLRTR------- 100
            ++  A++M   E+  RH  +FR+V+TH    W+ +F+ ++  T  E   R R       
Sbjct: 429 EAMNEAISMSQSEQLLRHEKHFRYVSTHDVAYWSRSFLQDMERTCSE-HFRRRCWGIGLS 487

Query: 101 ---QVLPLLP------IKVAVERYSQSNNRLLILGFSSTLTEPVDSLDRRGDQLKEMXXX 151
              +V+ L P      ++  V  Y ++ +R ++L +  T+  P +S+++   Q       
Sbjct: 488 FGFRVVALDPNFRKLSMEAIVSAYCRAKSRAILLDYDGTVM-PQNSINKAPSQ------- 539

Query: 152 XXXXXXXXXXXXCEDQKTTVVVLSGSDRNILDENFGEY-DMWLAAEHGMFLRLTTGEWMT 210
                       C D+K TV ++SG  R+ L + F     + LAAEHG FLR +  +   
Sbjct: 540 ---EVISILNTLCWDKKNTVFIVSGRGRDNLSQWFSPCRKLGLAAEHGYFLRWSQDKEWE 596

Query: 211 TMPENLNMDWVDSVKHVFEYFTERTPRSHFDLRETSLVWNYKYADVEFGRIQARDMLQHL 270
           T  ++ +  W    + V + +TE T  S  + +E++LVW Y  AD  FG  QA++ML HL
Sbjct: 597 TCGQSSDFGWKQIAEPVMKLYTETTDGSSIESKESALVWQYGDADPGFGSSQAKEMLDHL 656

Query: 271 WTGPISNAAVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVHNRGMKTPIDYVLCVG 326
               ++N  V V  G   VEV+  GV+KG A ++I   +  N       D++LC+G
Sbjct: 657 -ESVLANEPVAVKSGHFIVEVKPQGVSKGLAAEKIFTTMTEN---GKQADFLLCIG 708


>GSVIVT01011634001 assembled CDS
          Length = 702

 Score =  144 bits (364), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 162/321 (50%), Gaps = 24/321 (7%)

Query: 8   FVACQASKKGVLILSEFXXXXXXXXXXXXXVNPWNITEVAASIGYALNMPADEREKRHNH 67
           +V  +   K +L++SEF             VNPWNI  VA ++  AL M   E++ RH  
Sbjct: 385 YVVAECCLKSMLVVSEFIGCSPSLSGAIR-VNPWNIDAVADAMDSALEMLEPEKQLRHEK 443

Query: 68  NFRHVTTHTSQEWAATFMSELNDTIVEAQLRTRQVLPLLPIKVAVERYSQSNNRLLILGF 127
           ++R+V+TH    WA +F+ +L  T  +  +R R+    L ++  V  Y ++  R ++L +
Sbjct: 444 HYRYVSTHDVGYWARSFLQDLERTCRD-HVRRRK----LSMEHIVSAYKRTTTRAILLDY 498

Query: 128 SSTLTEPVDSLDRRGDQLKEMXXXXXXXXXXXXXXXCEDQKTTVVVLSGSDRNILDENFG 187
             TL  P  S+D +G   K +               C D+   V+++S   R  L++ F 
Sbjct: 499 DGTLM-PQASID-KGPTPKSI---------EMLKTLCRDENNMVLIVSARSRKKLEDWFS 547

Query: 188 EYD-MWLAAEHGMFLRLTTG-EWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFDLRET 245
             + + +AAEHG FLR     EW T +P   +  W    + V + +TE T  S  + +ET
Sbjct: 548 PCENLGIAAEHGYFLRPKGDVEWETCVPVA-DCSWKQIAEPVMKLYTETTDGSTIEDKET 606

Query: 246 SLVWNYKYADVEFGRIQARDMLQHLWTGPISNAAVDVVQGGRSVEVRAVGVTKGAAIDRI 305
           +L W Y+ AD +FG  QA+++L HL    ++N  V V  G   VEV+  GV+KG    R+
Sbjct: 607 ALAWCYEDADPDFGSCQAKELLDHL-ESVLANEPVTVKSGQSLVEVKPQGVSKGIVAKRL 665

Query: 306 LGEIVHNRGMKTPIDYVLCVG 326
           L   +  RGM    D+VLC+G
Sbjct: 666 LS-TMQERGMLP--DFVLCIG 683


>GSVIVT01021260001 assembled CDS
          Length = 784

 Score =  140 bits (352), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 171/355 (48%), Gaps = 45/355 (12%)

Query: 1   MNLVSYEFVACQ-------------ASKKGVLILSEFXXXXXXXXXXXXXVNPWNITEVA 47
           MNL+ YE++  +               KK +L++SEF             VNPWN+   A
Sbjct: 373 MNLIPYEYIVSRQGVSGSESGSESSGPKKSMLVVSEFIGCSPSLSGAIR-VNPWNVEATA 431

Query: 48  ASIGYALNMPADEREKRHNHNFRHVTTHTSQEWAATFMSELNDTIVEAQLR--------- 98
            ++  A++M   E++ RH  ++R+V+TH    W+ +F  ++  +  +   R         
Sbjct: 432 EAMNEAISMADAEKQLRHEKHYRYVSTHDVAYWSKSFFQDMERSCKDHFRRWCWGIGLSF 491

Query: 99  TRQVLPLLP------IKVAVERYSQSNNRLLILGFSSTLTEPVDSLDRRGDQLKEMXXXX 152
             +V+ L P      I   V  YS++ NR ++L +  T+  P  S+++   +        
Sbjct: 492 GFRVVALDPNFRKLSIDSIVSAYSRAKNRAILLDYDGTVM-PQTSINKTPSE-------- 542

Query: 153 XXXXXXXXXXXCEDQKTTVVVLSGSDRNILDENFGEYD-MWLAAEHGMFLRLTTGEWMTT 211
                      C D + TV V+SG  R+ L + F   + + +AAEHG FLR +  E    
Sbjct: 543 --DVILILNTLCSDPRNTVFVVSGRGRDSLGKWFSPCNRLGIAAEHGYFLRWSVNEEWEI 600

Query: 212 MPENLNMDWVDSVKHVFEYFTERTPRSHFDLRETSLVWNYKYADVEFGRIQARDMLQHLW 271
             ++ +  W+   + V + +TE T  S+ + +E++LVW+++ AD  FG  QA++ML HL 
Sbjct: 601 CGQSNDFGWIQMAEPVMKLYTEATDGSYIETKESALVWHHQDADPGFGSSQAKEMLDHL- 659

Query: 272 TGPISNAAVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVHNRGMKTPIDYVLCVG 326
              ++N  V V  G   VEV+  G++KG   ++I   +   RG +   D+VLCVG
Sbjct: 660 ESVLANEPVAVKSGQFIVEVKPQGISKGVVAEKIFTSMAE-RGRQA--DFVLCVG 711


>GSVIVT01013122001 assembled CDS
          Length = 261

 Score =  118 bits (295), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 97/165 (58%), Gaps = 7/165 (4%)

Query: 164 CEDQKTTVVVLSGSDRNILDENFGEYD-MWLAAEHGMFLRLT-TGEWMTTMPENLNMDWV 221
           C D K  V V+SG D+  L E F   + + +AAEHG FLRL+   EW T +P   + DW 
Sbjct: 22  CGDPKNVVFVVSGKDKKTLTEGFSSCEKLGIAAEHGYFLRLSHDAEWETCLPVT-DFDWK 80

Query: 222 DSVKHVFEYFTERTPRSHFDLRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNAAVD 281
              + V + +TE T  S  + +E++LVWNY+YAD +FG  QA+++L HL +  ++N  V 
Sbjct: 81  QIAEPVMKLYTETTDGSTIETKESALVWNYQYADPDFGSCQAKELLDHLES-VLANEPVS 139

Query: 282 VVQGGRSVEVRAVGVTKGAAIDRILGEIVHNRGMKTPIDYVLCVG 326
           V  G   VEV+  GV KG   +R+L   +  +GM    D+VLC+G
Sbjct: 140 VKSGQHIVEVKPQGVNKGLVAERLL-VTMRQKGMLP--DFVLCIG 181


>GSVIVT01007789001 assembled CDS
          Length = 717

 Score =  105 bits (261), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 96/164 (58%), Gaps = 5/164 (3%)

Query: 164 CEDQKTTVVVLSGSDRNILDENFGEY-DMWLAAEHGMFLRLTTGEWMTTMPENLNMDWVD 222
           C D K TV ++SG  +N L + F +  ++ +AAEHG F+R +      + P  ++ DW  
Sbjct: 480 CNDPKNTVFIVSGRGKNSLSDWFAQCQNLGIAAEHGYFIRWSQSSNWESRPLLMDFDWKR 539

Query: 223 SVKHVFEYFTERTPRSHFDLRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNAAVDV 282
               V + +TE T  S+ + +E++LVW+++ AD +FG  QA ++L HL    ++N  V+V
Sbjct: 540 IADPVMQLYTEATDGSYIETKESALVWHHQDADPDFGSCQAMELLDHL-ENVLANEPVEV 598

Query: 283 VQGGRSVEVRAVGVTKGAAIDRILGEIVHNRGMKTPIDYVLCVG 326
            +G   VEV+  GV+KG   ++IL  ++ +     P D+V+C+G
Sbjct: 599 KRGHHIVEVKPQGVSKGQVTEKILSTMISD---GKPPDFVMCIG 639


>GSVIVT01020215001 assembled CDS
          Length = 643

 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 94/164 (57%), Gaps = 5/164 (3%)

Query: 164 CEDQKTTVVVLSGSDRNILDENFGEYD-MWLAAEHGMFLRLTTGEWMTTMPENLNMDWVD 222
           C D K TV ++SG  R+ L E     + + +AAEHG F+R        +     ++DW  
Sbjct: 406 CSDPKNTVFIVSGRGRSSLSEWLAPCERLGIAAEHGYFMRWNESTKWESCNLAADLDWKK 465

Query: 223 SVKHVFEYFTERTPRSHFDLRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNAAVDV 282
            V+ V   +TE T  S+ +++E++LVW+++ AD +FG  QA++++ HL    ++N    V
Sbjct: 466 VVEPVMRLYTETTDGSNIEIKESALVWHHQDADPDFGSCQAKELMDHL-ENVLANEPAVV 524

Query: 283 VQGGRSVEVRAVGVTKGAAIDRILGEIVHNRGMKTPIDYVLCVG 326
            +G   VEV+  GV+KG   +++L  +V++     P D+V+C+G
Sbjct: 525 KRGQHIVEVKPQGVSKGLVAEKVLSTMVND---GKPPDFVMCIG 565


>GSVIVT01031857001 assembled CDS
          Length = 577

 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 32/191 (16%)

Query: 7   EFVACQASKKGVLILSEFXXXXXXXXXXXXXVNPWNITEVAASIGYALNMPADEREKRHN 66
           EF+ C  S  G +                  VNPWN+   A ++  A++M   E+  RH 
Sbjct: 384 EFIGCSPSLSGAIC-----------------VNPWNVEATAEAMNEAISMSQSEQLLRHE 426

Query: 67  HNFRHVTTHTSQEWAATFMSELNDTIVEAQLRTRQVLPLLPIKVAVERYSQSNNRLLILG 126
            +FR+V+TH    W+ +F+ ++  T  E     R+    + +K  V  Y ++ +R ++L 
Sbjct: 427 KHFRYVSTHDVAYWSRSFLQDMERTCSEL---FRRRCWGIGLKAIVSAYCRAKSRAILLD 483

Query: 127 FSSTLTEPVDSLDRRGDQLKEMXXXXXXXXXXXXXXXCEDQKTTVVVLSGSDRNILDENF 186
           +  T+  P +S+++   Q                   C D+K  V ++SG  R+ L + F
Sbjct: 484 YDGTVM-PQNSINKAPSQ----------EVISILNTLCWDKKNIVFIVSGRGRDNLSQWF 532

Query: 187 GEY-DMWLAAE 196
                + LAAE
Sbjct: 533 SPCRKLGLAAE 543