Jatropha Genome Database

JcCA0147021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0147021.10 - phase: 0 /partial
         (196 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01029124001 assembled CDS                                       168   1e-42
GSVIVT01025577001 assembled CDS                                       168   2e-42
GSVIVT01037005001 assembled CDS                                       135   1e-32
GSVIVT01037008001 assembled CDS                                       129   1e-30
GSVIVT01036997001 assembled CDS                                       126   6e-30
GSVIVT01037000001 assembled CDS                                       124   2e-29
GSVIVT01038540001 assembled CDS                                       120   3e-28
GSVIVT01003762001 assembled CDS                                       105   1e-23
GSVIVT01037011001 assembled CDS                                       105   1e-23
GSVIVT01036993001 assembled CDS                                       103   4e-23
GSVIVT01037015001 assembled CDS                                       101   2e-22

>GSVIVT01029124001 assembled CDS
          Length = 173

 Score =  168 bits (426), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 82/138 (59%), Positives = 97/138 (70%), Gaps = 5/138 (3%)

Query: 60  QFLFAHNLVRAAKWELPLMWDFQLEKYARWWAGLRKADCQLVHSFPEGDFKLGENIYWGS 119
           QFL  HN  R A     L+WD +L  YA W+A  R+ DC L HS    + + GENI+WGS
Sbjct: 40  QFLAPHNAARTAVGMRRLVWDSKLAHYAEWYANQRRRDCALKHS----NGQYGENIFWGS 95

Query: 120 GNTWTPRDAVSAWASEEKYYSYETNSCVEGEMCGHYTQIVWKSTRRIGCARVVCDDG-DV 178
           G+ WTP  AV+AW SE ++Y Y +NSC  G+ CGHYTQIVW STRR+GCARV C  G  V
Sbjct: 96  GSGWTPAQAVAAWVSERRWYDYGSNSCAYGQECGHYTQIVWGSTRRVGCARVNCYGGRGV 155

Query: 179 FMTCNYDPPGNYIGERPY 196
           F+TCNYDPPGNYIGERPY
Sbjct: 156 FITCNYDPPGNYIGERPY 173


>GSVIVT01025577001 assembled CDS
          Length = 248

 Score =  168 bits (425), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 81/159 (50%), Positives = 107/159 (67%), Gaps = 8/159 (5%)

Query: 38  PDNETIYKISKQLCLGCIGESLQFLFAHNLVRAAKWELPLMWDFQLEKYARWWAGLRKAD 97
           P N T  K  ++L LG +    +F+ AHN+VRA   E P  WD  L +YAR +A  R AD
Sbjct: 58  PTNGTAAK--RKLSLGSMAR--EFVLAHNVVRAHYQEPPFKWDRGLARYARRFASKRVAD 113

Query: 98  CQLVHSFPEGDFKLGENIYWGSGNTWTPRDAVSAWASEEKYYSYETNSCVEGEMCGHYTQ 157
           C ++HSF  G +  GENI+WG  + WTP D V +WA E KYY+ +TN C +G+MCGHYTQ
Sbjct: 114 CLMIHSF--GPY--GENIFWGMRDHWTPTDVVESWAKEHKYYNKDTNQCTQGQMCGHYTQ 169

Query: 158 IVWKSTRRIGCARVVCDDGDVFMTCNYDPPGNYIGERPY 196
           IVW+ + R+GCARV C +G ++  C+YDPPGNYI E P+
Sbjct: 170 IVWRDSVRLGCARVNCLNGGMYAICSYDPPGNYINENPF 208


>GSVIVT01037005001 assembled CDS
          Length = 160

 Score =  135 bits (340), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/136 (50%), Positives = 87/136 (63%), Gaps = 6/136 (4%)

Query: 61  FLFAHNLVRAAKWELPLMWDFQLEKYARWWAGLRKADCQLVHSFPEGDFKLGENIYWGSG 120
           +L AHN  RA     P+ WD  +  YA+ +A  R  DC LVHS        GEN+ WGS 
Sbjct: 31  YLNAHNTARAQVGVGPMSWDNTVAAYAQNYANQRIGDCNLVHS----GGPYGENLAWGS- 85

Query: 121 NTWTPRDAVSAWASEEKYYSYETNSCVEGEMCGHYTQIVWKSTRRIGCARVVCDDGDVFM 180
            + T  DAV+ W  E+  Y Y +NSCV G+ CGHYTQ+VW  + R+GCARV C++G  F+
Sbjct: 86  PSLTGTDAVNLWVGEKSNYDYNSNSCVGGQ-CGHYTQVVWSKSVRLGCARVQCNNGGWFV 144

Query: 181 TCNYDPPGNYIGERPY 196
           TCNYDP GNYIG+RPY
Sbjct: 145 TCNYDPRGNYIGQRPY 160


>GSVIVT01037008001 assembled CDS
          Length = 176

 Score =  129 bits (323), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/163 (43%), Positives = 96/163 (58%), Gaps = 17/163 (10%)

Query: 45  KISKQLCLGCIGESL-----------QFLFAHNLVRAAKWELPLMWDFQLEKYARWWAGL 93
           KIS  L +G +G  L            FL AHN  RA      + W+  +  YA+ +A  
Sbjct: 5   KISSSLVVGFMGLVLAHISYAQNSPQDFLDAHNAARAEVGVESMTWNDTVAAYAQNYANQ 64

Query: 94  RKADCQLVHSFPEGDFKLGENIYWGSGNTWTPRDAVSAWASEEKYYSYETNSCVEGEMCG 153
           R  DC LVHS   G +  GENI WG+  + T  DAV+ W  E+ YY Y +NSCV GE C 
Sbjct: 65  RIGDCNLVHS--SGPY--GENIAWGTP-SLTGTDAVNMWVGEKPYYDYNSNSCVGGE-CL 118

Query: 154 HYTQIVWKSTRRIGCARVVCDDGDVFMTCNYDPPGNYIGERPY 196
            Y +++W+++  +GCARV C+ G  F+TCNYDPPGNY+G+RP+
Sbjct: 119 QYIKVIWRNSLHLGCARVQCNTGGWFVTCNYDPPGNYVGQRPF 161


>GSVIVT01036997001 assembled CDS
          Length = 163

 Score =  126 bits (317), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 65/139 (46%), Positives = 90/139 (64%), Gaps = 8/139 (5%)

Query: 61  FLFAHNLVRAAKWELPLMWDFQLEKYARWWAGLRKAD-CQLVHSFPEGDFKLGENIY--W 117
           ++ AHN  RA     P+ W+  +  YAR +A  R A+ C + HS        GEN+   +
Sbjct: 30  YVDAHNAARAQVGVQPITWNETVAAYARRYASSRVAEQCSMEHS----GGPYGENLAEGY 85

Query: 118 GSGNTWTPRDAVSAWASEEKYYSYETNSCVEGEMCGHYTQIVWKSTRRIGCARVVCDDGD 177
           GS  + T  DAV+ W  E+  Y Y +NSCV G+ CGHYTQ+VW+++ R+GCARV C++G 
Sbjct: 86  GSIGSLTGTDAVNLWVGEKPNYDYNSNSCVGGK-CGHYTQVVWRNSVRLGCARVQCNNGG 144

Query: 178 VFMTCNYDPPGNYIGERPY 196
            F+TCNYDPPGNY+G+RPY
Sbjct: 145 WFVTCNYDPPGNYVGQRPY 163


>GSVIVT01037000001 assembled CDS
          Length = 161

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/136 (46%), Positives = 85/136 (62%), Gaps = 6/136 (4%)

Query: 61  FLFAHNLVRAAKWELPLMWDFQLEKYARWWAGLRKADCQLVHSFPEGDFKLGENIYWGSG 120
           +L  HN  RA     P+ WD  +  YAR +A  R  DC +VHS    +   GEN+  GSG
Sbjct: 32  YLDVHNAARADVGVEPMTWDDNVAAYARDYASQRSGDCNMVHS----NGPYGENLAMGSG 87

Query: 121 NTWTPRDAVSAWASEEKYYSYETNSCVEGEMCGHYTQIVWKSTRRIGCARVVCDDGDVFM 180
           + +T  DA + W  E+  Y Y +NSCV GE CGHYTQ+VW+++  +GCARV C++G  F+
Sbjct: 88  D-FTATDAANLWVGEKSNYDYNSNSCVGGE-CGHYTQVVWRNSVSLGCARVQCNNGWWFV 145

Query: 181 TCNYDPPGNYIGERPY 196
           +CNY P GN IG+ PY
Sbjct: 146 SCNYSPQGNIIGQHPY 161


>GSVIVT01038540001 assembled CDS
          Length = 161

 Score =  120 bits (302), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 62/136 (45%), Positives = 87/136 (63%), Gaps = 6/136 (4%)

Query: 61  FLFAHNLVRAAKWELPLMWDFQLEKYARWWAGLRKADCQLVHSFPEGDFKLGENIYWGSG 120
           +L AHN  RA     P+ W+  +  YA+ +A  +  DC LVHS    +   GEN+  GSG
Sbjct: 32  YLNAHNTARAQVSVGPMTWNNTVAAYAQSYANKQIGDCNLVHS----NGPYGENLAKGSG 87

Query: 121 NTWTPRDAVSAWASEEKYYSYETNSCVEGEMCGHYTQIVWKSTRRIGCARVVCDDGDVFM 180
            ++T   AV+ W +E+  Y Y +NSCV GE C HYTQ+VW+++  +GCAR  C++G  ++
Sbjct: 88  -SFTGTAAVNLWVAEKPNYDYNSNSCVGGE-CRHYTQVVWRNSVSLGCARAQCNNGWWYI 145

Query: 181 TCNYDPPGNYIGERPY 196
            CNY PPGNYIG+RPY
Sbjct: 146 ICNYYPPGNYIGQRPY 161


>GSVIVT01003762001 assembled CDS
          Length = 184

 Score =  105 bits (262), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/140 (41%), Positives = 73/140 (52%), Gaps = 6/140 (4%)

Query: 60  QFLFAHNLVRAAKWELPLMWDFQLEKYARWWAGLR--KADCQLVHSFPEGDFKLGENIYW 117
           +FL AHN  RA     P  W  QL          +  K  CQ  +     + K G N  W
Sbjct: 48  EFLEAHNQARAEVGVGPFQWSEQLAHATSLLVRYQRDKHGCQFANL---SNSKYGGNQLW 104

Query: 118 GSGNTWTPRDAVSAWASEEKYYSYETNSCVEGEMCGHYTQIVWKSTRRIGCARVVCDDGD 177
            SG+  T R AV  W  E+KYY++  NSCV    CG YTQ+VW+ +  +GCA+ VC   D
Sbjct: 105 ASGSGMTARLAVEEWVGEKKYYNHSDNSCVANHECGVYTQVVWRKSLELGCAKAVCAKED 164

Query: 178 VFMT-CNYDPPGNYIGERPY 196
             +T C Y+PPGN IGE PY
Sbjct: 165 ASLTICFYNPPGNVIGESPY 184


>GSVIVT01037011001 assembled CDS
          Length = 155

 Score =  105 bits (262), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 83/163 (50%), Gaps = 38/163 (23%)

Query: 45  KISKQLCLGCIGESL-----------QFLFAHNLVRAAKWELPLMWDFQLEKYARWWAGL 93
           KIS  L +G +G  L            FL AHN+ RA     P+ WD  +  YA+ +   
Sbjct: 5   KISSSLVVGFMGLVLAHISYAQNSPQDFLDAHNVARAEVGVGPMSWDNTVAAYAQNYTNQ 64

Query: 94  RKADCQLVHSFPEGDFKLGENIYWGSGNTWTPRDAVSAWASEEKYYSYETNSCVEGEMCG 153
           R  DC LVHS        GEN+ WGS  + T  DAV+                       
Sbjct: 65  RIGDCNLVHS----GGPYGENLAWGS-PSLTGIDAVNL---------------------- 97

Query: 154 HYTQIVWKSTRRIGCARVVCDDGDVFMTCNYDPPGNYIGERPY 196
           HYTQ++W+++ R+GCAR  C+ G  F+TCNYDPPGNY+G+RP+
Sbjct: 98  HYTQVIWRNSLRLGCARAQCNSGGWFVTCNYDPPGNYVGQRPF 140


>GSVIVT01036993001 assembled CDS
          Length = 161

 Score =  103 bits (258), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/137 (43%), Positives = 78/137 (56%), Gaps = 6/137 (4%)

Query: 61  FLFAHNLVRAAKWELPLMWDFQLEKYARWWAGLR-KADCQLVHSFPEGDFKLGENIYWGS 119
           ++ AHN  RA     P+ W+  +  YAR +A  R  A C L +S        GEN+    
Sbjct: 30  YVDAHNAARAQVGVQPIAWNETVAAYARRYASSRVAAHCSLENS----GGPYGENLAKVY 85

Query: 120 GNTWTPRDAVSAWASEEKYYSYETNSCVEGEMCGHYTQIVWKSTRRIGCARVVCDDGDVF 179
           G + +  DAV  W +E+  Y Y +NSCV GE C HYTQIVW  +  +GCA V C +G  F
Sbjct: 86  GTSVSGSDAVEFWVTEKPNYDYNSNSCVGGE-CLHYTQIVWGDSLYLGCASVHCKNGWWF 144

Query: 180 MTCNYDPPGNYIGERPY 196
           +TCNY PPGN  G+RPY
Sbjct: 145 ITCNYHPPGNMEGQRPY 161


>GSVIVT01037015001 assembled CDS
          Length = 267

 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 85/162 (52%), Gaps = 39/162 (24%)

Query: 46  ISKQLCLGCIGESL-----------QFLFAHNLVRAAKWELPLMWDFQLEKYARWWAGLR 94
           IS  L +G +G +L            ++ AHN  RA      + W+  +  YA+ +A  R
Sbjct: 134 ISMALLVGLMGLALAHTCCAQNSPQDYVDAHNAARAQVGVGSITWNDTVAAYAQNYANQR 193

Query: 95  KADCQLVHSFPEGDFKLGENIYWGSGNTWTPRDAVSAWASEEKYYSYETNSCVEGEMCGH 154
            +DC LVHS        GEN+  GSG + T  DA                       CGH
Sbjct: 194 ISDCNLVHS----GGPYGENLAKGSG-SLTGTDA-----------------------CGH 225

Query: 155 YTQIVWKSTRRIGCARVVCDDGDVFMTCNYDPPGNYIGERPY 196
           YTQ+VW+++ R+GCARV C++G  F+TCNYDPPGNY+G+RPY
Sbjct: 226 YTQVVWRNSVRLGCARVQCNNGWWFVTCNYDPPGNYVGQRPY 267



 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 79/158 (50%), Gaps = 39/158 (24%)

Query: 45  KISKQLCLGCIGESL-----------QFLFAHNLVRAAKWELPLMWDFQLEKYARWWAGL 93
           KIS  L +G +G +L            ++ AHN  RA      + W+  +  YA+ +A  
Sbjct: 5   KISLPLLVGLMGLALAHVCCAQNSPQDYVNAHNAARAQVGVGSMTWNDTVAAYAQNYANK 64

Query: 94  RKADCQLVHSFPEGDFKLGENIYWGSGNTWTPRDAVSAWASEEKYYSYETNSCVEGEMCG 153
           R +DC LVHS        GEN+  GSG + T  DA                       C 
Sbjct: 65  RISDCNLVHS----GGPYGENLAKGSG-SLTGTDA-----------------------CL 96

Query: 154 HYTQIVWKSTRRIGCARVVCDDGDVFMTCNYDPPGNYI 191
           HYTQ+VW ++ R+GCARV C++G  F+TCNYDPPGNYI
Sbjct: 97  HYTQVVWSNSVRLGCARVQCNNGWWFVTCNYDPPGNYI 134