Jatropha Genome Database
- JcCA0145721.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0145721.20 + phase: 0 /partial
(304 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01037800001 assembled CDS 137 7e-33
GSVIVT01037804001 assembled CDS 134 7e-32
GSVIVT01037806001 assembled CDS 131 4e-31
GSVIVT01037805001 assembled CDS 74 6e-14
GSVIVT01022498001 assembled CDS 70 1e-12
GSVIVT01034603001 assembled CDS 69 2e-12
GSVIVT01037528001 assembled CDS 65 5e-11
GSVIVT01035878001 assembled CDS 59 3e-09
GSVIVT01018133001 assembled CDS 51 6e-07
GSVIVT01015601001 assembled CDS 51 7e-07
>GSVIVT01037800001 assembled CDS
Length = 389
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 147/296 (49%), Gaps = 16/296 (5%)
Query: 14 PPYYAVEIQKFSAPKDYQVTKYESEVFEAQEYKWKLVVHLKGSKSKD---HISLYLALAD 70
P +Y ++ S D + KYES FE YKW+L ++ G+K D HISLYL ++D
Sbjct: 93 PAHYLFRVESMSVLLDTSIEKYESGSFEVGGYKWRLCLYPNGNKKSDGDGHISLYLVISD 152
Query: 71 T--LEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVAAFR 128
T L V F+L++ + + +L Q D++GK F+ K + GF +F+ +
Sbjct: 153 TQNLPLGWEVTVSFKLFVFNHIHEEYLTVQ--DTDGKVRHFNVMKTQCGFAQFLPLDVLT 210
Query: 129 DPSNGYLVGDACVVGVEVISADKATITGKEESLSINKQGHVAKHLWKIEKFSKL-SETRT 187
DP NGYL+ D+C+ G EV +GK E LS+ K+ W IE FS+L E
Sbjct: 211 DPCNGYLMDDSCIFGAEVFVIK---YSGKGECLSMIKEPDDGTFTWMIENFSRLKQEAIY 267
Query: 188 SEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIYTHVTLRVLDQ--- 244
SEIFT +WK+ ++P+G K + LSL++ L + + K+YT L V +Q
Sbjct: 268 SEIFTVKDFKWKLVVYPKGNYKAKNKSLSLFLELANRGTLHHQRKLYTEFELLVKEQCNG 327
Query: 245 --LKDKHIIAEENFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFEDVLFVDAEVKVL 298
+K H+ WF + G+S + L L D L V+A++ ++
Sbjct: 328 GHVKPSHVKLNGQTWFCDSIKDWGFSNMISLSDLKDKSNHFILNDTLIVEAKIMLM 383
>GSVIVT01037804001 assembled CDS
Length = 672
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 152/310 (49%), Gaps = 20/310 (6%)
Query: 4 NMTMQISEKI----PPYYAVEIQKFSAPKDYQVTKYESEVFEAQEYKWKLVVHLKGSK-- 57
N T IS + P +Y ++ S + + KYES F+ Y+W+L ++ G+K
Sbjct: 362 NSTTSISRTLRSIKPAHYLFRVESVSVLLNTDIEKYESGSFKVGGYRWRLCLYPNGNKKS 421
Query: 58 -SKDHISLYLALADT--LEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKL 114
+DHISLYL ++D L V F+L++ + + +L Q D++GK F+ K
Sbjct: 422 GGEDHISLYLEISDAQKLPVGWEVTVNFKLFVFNHIHEKYLTVQ--DADGKVRDFNVMKS 479
Query: 115 EWGFDKFINVAAFRDPSNGYLVGDACVVGVEVISADKATITGKEESLSINKQGHVAKHLW 174
GF +F+++ +DP NGYL+ D+C+ G EV +GK E LS+ K W
Sbjct: 480 RCGFAQFLSLDVLKDPCNGYLMDDSCIFGAEVFV---IKYSGKGECLSMIKDPDDGTFTW 536
Query: 175 KIEKFSKLS-ETRTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKI 233
IE FS L+ E SE FT +WK+ L+P+G K + L L++ L D + K+
Sbjct: 537 VIENFSTLNEEVLYSETFTIKEIKWKLSLYPKGNGKVKNKSLCLFLELADCETLHHQRKL 596
Query: 234 YTHVTLRVLDQLKDK-----HIIAEENFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFEDV 288
Y L + DQ D+ H+ + WF + G++ + L L+ K D
Sbjct: 597 YMEFELLIKDQCNDENVEPSHVKSNAKVWFCDSNKEWGFADMVSLSDLNDKSKDFLLNDS 656
Query: 289 LFVDAEVKVL 298
L V+A++ ++
Sbjct: 657 LIVEAKILLM 666
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 142/287 (49%), Gaps = 17/287 (5%)
Query: 14 PPYYAVEIQKFSAPKDYQVTKYESEVFEAQEYKWKLVVHLKGSKSKD---HISLYLAL-- 68
P +Y +++ S + + KYES FE YKW L ++ G+K D HISLYL +
Sbjct: 34 PAHYLFKVESLSVLLNTDIEKYESGSFEVGGYKWSLCIYPNGNKKSDGEGHISLYLEISE 93
Query: 69 ADTLEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVAAFR 128
A L V F+L++ + + +L Q D++GK F+ K GF +F+++ +
Sbjct: 94 AQNLPLGWEVTVNFKLFVFNHIHEKYLTVQ--DADGKVRHFNAMKTRCGFAQFLSLDVLK 151
Query: 129 DPSNGYLVGDACVVGVEVISADKATITGKEESLSINKQGHVAKHLWKIEKFSKLS-ETRT 187
DP NGYL+ D+C+ G EV +GK ESLS+ K W IE FS L+ E
Sbjct: 152 DPRNGYLMDDSCIFGAEVFV---IKYSGKGESLSMIKDPVDGTFTWTIENFSALNQEVLD 208
Query: 188 SEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIYTHVTLRVLDQLKD 247
SEIFT +W++ L+P+G + K + LSL++ L + + K+YT L + DQ D
Sbjct: 209 SEIFTVKELKWRLVLYPKGNNKAKNKSLSLFLELTNRETLH-QRKLYTAFELLIKDQCND 267
Query: 248 K-----HIIAEENFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFEDVL 289
+ H+ + WF T G+ + L L+ K D L
Sbjct: 268 EIVMPSHVKSNAKVWFRDTIENWGFPNMVSLSDLNDKSKYFLLNDSL 314
>GSVIVT01037806001 assembled CDS
Length = 321
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 128/237 (54%), Gaps = 11/237 (4%)
Query: 14 PPYYAVEIQKFSAPKDYQVTKYESEVFEAQEYKWKLVVHLKG---SKSKDHISLYLALAD 70
P Y ++ S+ + + KYES FEA YKW+L ++ G S K +ISLYLA+AD
Sbjct: 25 PSDYLFRVECVSSLMNTNIEKYESGKFEAGGYKWRLCLYPNGNIKSNGKGYISLYLAIAD 84
Query: 71 T--LEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVAAFR 128
T L V F+L++ + K+ +L Q D+ GK F+ K + GF +F+++
Sbjct: 85 TKMLPLGWEVNVNFKLFVFNHKHDQYLTVQ--DAGGKLTRFNVMKTQCGFPQFLSLDVLN 142
Query: 129 DPSNGYLVGDACVVGVEVISADKATITGKEESLSINKQGHVAKHLWKIEKFSKLSE-TRT 187
DP NGYL+ D+C+ G EV +GK E LS+ K+ W IE FS L E
Sbjct: 143 DPCNGYLMEDSCIFGAEVFVIK---YSGKGECLSMIKEPVDGTFTWVIENFSTLKEKVMY 199
Query: 188 SEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIYTHVTLRVLDQ 244
S++FT +WK+ L+P+G+ K + LSL++ L D +D SK+Y L + DQ
Sbjct: 200 SDVFTVEDFKWKLILYPKGSSKTKNKSLSLFLELADCETLDNQSKLYAEFELLISDQ 256
>GSVIVT01037805001 assembled CDS
Length = 169
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 101 DSEGKKICFHKRKLEWGFDKFINVAAFRDPSNGYLVGDACVVGVEVISADKATITGKEES 160
D++GK F+ K GF +F+++ +DP NGYL+ D+C+ G EV +GK E
Sbjct: 10 DADGKVRHFNVMKTPCGFARFLSLDVLKDPRNGYLMDDSCIFGAEVFVIK---YSGKGEC 66
Query: 161 LSINKQGHVAKHLWKIEKFSKLS-ETRTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYV 219
S+ K W I+ FS L+ E SEIF + K+ L+PEG K + LSL+
Sbjct: 67 PSMLKDPVGGTFTWVIKNFSTLNEEVLHSEIFNVKEYKGKLSLYPEGNGKAKNKSLSLF- 125
Query: 220 CLGDDNAIDPSSKIYTHVTLRVLDQLKDKH 249
LG + +K Y L +Q + +H
Sbjct: 126 -LGLAETLHHPTKFYAEFELLTKNQCRGRH 154
>GSVIVT01022498001 assembled CDS
Length = 1116
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 20/160 (12%)
Query: 1 VASNMTMQISEKIPPYYAVEIQKFSAPKDYQVT------------KYESEVFEAQEYKWK 48
V M++ + AVE Q P+ + T K+ SE+F +KW+
Sbjct: 25 VEGPQPMEVVAQADASSAVENQPVEDPQTSRFTWTIENFSRLNTKKHYSEIFVVGGFKWR 84
Query: 49 LVVHLKGSKSKDHISLYLALAD--TLEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKK 106
+++ KG+ + DH+S+YL +AD TL YA F L ++++ ++ + IR+ D++ +
Sbjct: 85 VLIFPKGN-NVDHLSMYLDVADSATLPYGWSRYAQFSLSVVNQIHNKYSIRK--DTQHQ- 140
Query: 107 ICFHKRKLEWGFDKFINVAAFRDPSNGYLVGDACVVGVEV 146
F+ R+ +WGF F+ ++ DP GYLV D C++ EV
Sbjct: 141 --FNARESDWGFTSFMPLSDLYDPGRGYLVNDTCIIEAEV 178
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 168 HVAKHLWKIEKFSKLSETR-TSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNA 226
++ W IE FS+L+ + SEIF G +W++ + P+G ++ ++LS+Y+ + D
Sbjct: 52 QTSRFTWTIENFSRLNTKKHYSEIFVVGGFKWRVLIFPKGNNV---DHLSMYLDVADSAT 108
Query: 227 IDPSSKIYTHVTLRVLDQLKDKHIIAEE-NFWFDSTRSRHGWSRFLPLDYLHRFKKSLQF 285
+ Y +L V++Q+ +K+ I ++ F++ S G++ F+PL L+ +
Sbjct: 109 LPYGWSRYAQFSLSVVNQIHNKYSIRKDTQHQFNARESDWGFTSFMPLSDLYDPGRGYLV 168
Query: 286 EDVLFVDAEVKVLAV 300
D ++AEV V +
Sbjct: 169 NDTCIIEAEVAVRKI 183
>GSVIVT01034603001 assembled CDS
Length = 1115
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 12/149 (8%)
Query: 1 VASNMTMQISEKIP-PYYAVEIQKFSAPKDYQVTKYESEVFEAQEYKWKLVVHLKGSKSK 59
AS + Q E P + I+ FS K S+VF YKW++++ KG+ +
Sbjct: 37 TASAVDAQTVEDPPSARFTWTIENFSR---LNTKKLYSDVFYVGGYKWRVLIFPKGN-NV 92
Query: 60 DHISLYLALAD--TLEPHILVYAVFRLYLLDRKNHNHLIRQLPDSEGKKICFHKRKLEWG 117
DH+S+YL +AD TL YA F L ++++ ++ IR+ D++ + F+ R+ +WG
Sbjct: 93 DHLSMYLDVADSATLPYGWSRYAQFSLAVINQIHNKFTIRK--DTQHQ---FNARESDWG 147
Query: 118 FDKFINVAAFRDPSNGYLVGDACVVGVEV 146
F F+ + DP+ GYLV D C+V +V
Sbjct: 148 FTSFMPLGELYDPARGYLVNDTCIVEADV 176
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 170 AKHLWKIEKFSKLSETRT-SEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAID 228
A+ W IE FS+L+ + S++F G +W++ + P+G ++ ++LS+Y+ + D +
Sbjct: 52 ARFTWTIENFSRLNTKKLYSDVFYVGGYKWRVLIFPKGNNV---DHLSMYLDVADSATLP 108
Query: 229 PSSKIYTHVTLRVLDQLKDKHIIAEE-NFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFED 287
Y +L V++Q+ +K I ++ F++ S G++ F+PL L+ + D
Sbjct: 109 YGWSRYAQFSLAVINQIHNKFTIRKDTQHQFNARESDWGFTSFMPLGELYDPARGYLVND 168
Query: 288 VLFVDAEVKVLAVTN 302
V+A+V V V +
Sbjct: 169 TCIVEADVAVRRVID 183
>GSVIVT01037528001 assembled CDS
Length = 1116
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 70/115 (60%), Gaps = 8/115 (6%)
Query: 34 KYESEVFEAQEYKWKLVVHLKGSKSKDHISLYLALADT--LEPHILVYAVFRLYLLDRKN 91
K+ SE F YKW++++ KG+ + +H+S+YL +AD+ L YA F L ++++ +
Sbjct: 69 KHYSENFIVGGYKWRVLIFPKGN-NVEHLSMYLDVADSSSLPYGWSRYAQFSLAVVNQIH 127
Query: 92 HNHLIRQLPDSEGKKICFHKRKLEWGFDKFINVAAFRDPSNGYLVGDACVVGVEV 146
+ + +R+ D++ + F+ R+ +WGF F+ ++ DP G+LV D C+V EV
Sbjct: 128 NKYTVRK--DTQHQ---FNARESDWGFTSFMPLSELYDPGRGFLVSDTCIVEAEV 177
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 144 VEVISADKATITGKEESLSINKQGHVAKHLWKIEKFSKLSETR-TSEIFTDGIQEWKIEL 202
+EV++ ++ T T + + + + ++ W+IE FS+L+ + SE F G +W++ +
Sbjct: 30 MEVVAQEETTSTVENQPV---EDPPTSRFTWRIENFSRLNTKKHYSENFIVGGYKWRVLI 86
Query: 203 HPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIYTHVTLRVLDQLKDKHIIAEE-NFWFDST 261
P+G ++ E+LS+Y+ + D +++ Y +L V++Q+ +K+ + ++ F++
Sbjct: 87 FPKGNNV---EHLSMYLDVADSSSLPYGWSRYAQFSLAVVNQIHNKYTVRKDTQHQFNAR 143
Query: 262 RSRHGWSRFLPLDYLHRFKKSLQFEDVLFVDAEVKVLAVTN 302
S G++ F+PL L+ + D V+AEV V V +
Sbjct: 144 ESDWGFTSFMPLSELYDPGRGFLVSDTCIVEAEVAVRRVVD 184
>GSVIVT01035878001 assembled CDS
Length = 1683
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 134/322 (41%), Gaps = 31/322 (9%)
Query: 9 ISEKIPPYYAVEIQKFSAPKDY-QVTKYESEVFEAQEYKWKLVVHLKGSKSKDHISLYLA 67
+S+ + + ++ FS K+ + K S VF A E ++ V+ +++S+ L
Sbjct: 230 VSDVLSGKFTWKVHNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSSVNGVEYLSMCLE 289
Query: 68 LADTLEPHIL---VYAVFRLYLLDRK-NHNHLIRQLPDSEGKKICFHKR--KLEWGFDKF 121
DT + + + +FR+ +L++K NH+ R DS G+ +K G++ +
Sbjct: 290 SKDTEKAVVSDRSCWCLFRMSVLNQKPGLNHMHR---DSYGRFAADNKSGDNTSLGWNDY 346
Query: 122 INVAAFRDPSNGYLVGDACVVGVEV--------ISADKATITGKEESLSINKQ-GHVAKH 172
+ ++ F +G+LV D V S + I + S K GH+ K
Sbjct: 347 MKMSDFIGSDSGFLVDDTAVFSTSFHVIKEFSSFSKNGGLIGVRGGSGGTRKSDGHLGKF 406
Query: 173 LWKIEKFSKLSE----------TRTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLG 222
W+IE F++L + S F G ++ ++ ++P G +LS+++ +
Sbjct: 407 TWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPC-HLSVFLEVT 465
Query: 223 DDNAIDPSSKIYTHVTLRVLDQ-LKDKHIIAEENFWFDSTRSRHGWSRFLPLDYLHRFKK 281
D + L V++Q ++DK + E + GW F+ L L
Sbjct: 466 DSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDS 525
Query: 282 SLQFEDVLFVDAEVKVLAVTNV 303
+D + AEV +L T+
Sbjct: 526 GFLVQDTVVFSAEVLILKETST 547
>GSVIVT01018133001 assembled CDS
Length = 1074
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 170 AKHLWKIEKFSKLSETR-TSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAID 228
K+ WKIEKFS++++ S F G +W I ++P+G D+ +LSL++C+ + + +
Sbjct: 68 GKYTWKIEKFSQINKRELRSNAFEVGGYKWYILIYPQGCDV--CNHLSLFLCVANHDKLL 125
Query: 229 PSSKIYTHVTLRVL--DQLKDKHIIAEENFWFDSTRSRH--GWSRFLPLDYLHRFKKSLQ 284
P + T+ V+ D K K+ FW + H GW +F+ L +
Sbjct: 126 PGWSHFAQFTIAVVNKDPKKSKYSDTLHRFW----KKEHDWGWKKFM---ELSKVLDGFI 178
Query: 285 FEDVLFVDAEVKVL 298
D L + A+V+V+
Sbjct: 179 DADTLIIKAQVQVI 192
>GSVIVT01015601001 assembled CDS
Length = 1517
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/309 (18%), Positives = 121/309 (39%), Gaps = 34/309 (11%)
Query: 21 IQKFSAPKD-YQVTKYESEVFEAQEYKWKLVVHLKGSKSKDHISLYLALADTLEPHILVY 79
++ F KD ++ K S F+ E ++ ++ +++S+ L P +
Sbjct: 164 LKNFVVFKDIFKTQKLVSPAFQVGECSVRICIYRSWINGVEYLSMSLE-GREFTPDRNCW 222
Query: 80 AVFRLYLLDRK-NHNHLIRQL-----PDSEGKKICFHKRKLEWGFDKFINVAAFRDPSNG 133
+FR+ +L++K N ++ PD+ G C G+ ++ ++ + NG
Sbjct: 223 CLFRVSVLNQKPGLNQFYKESYGRFGPDTNGGDGC------SLGWIDYMKMSQLVESENG 276
Query: 134 YLVGDACVVGVEV--------ISADKATITGKEESLSINKQGHVAKHLWKIEKFSKLSE- 184
+ + V S + + G+ S++ G+ K WKIE F+KL +
Sbjct: 277 FFIDGTLVFSTSFHVIKEFSNFSKNGGVLAGRGTSVARKSDGYTGKFTWKIENFTKLKDL 336
Query: 185 ---------TRTSEIFTDGIQEWKIELHPEGTDLGKMEYLSLYVCLGDDNAIDPSSKIYT 235
S F ++ + L+P G YLS+++ + D +
Sbjct: 337 LKRKRIKNLCIKSRKFQIANRDCHLLLYPRGQSQPPC-YLSMFLEVTDSLNTSYDWSCFV 395
Query: 236 HVTLRVLDQL-KDKHIIAEENFWFDSTRSRHGWSRFLPLDYLHRFKKSLQFEDVLFVDAE 294
H + V++Q +++ I E + + GW F+ L L L +D + +
Sbjct: 396 HYRVSVINQKGEERSITKESQSRYSKSAKEFGWPEFVTLASLFDQDSGLLVQDTIAFSVD 455
Query: 295 VKVLAVTNV 303
+ +L T++
Sbjct: 456 LLILKETSL 464