Jatropha Genome Database

JcCA0144561.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0144561.10 - phase: 0 
         (694 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01023351001 assembled CDS                                      1086   0.0  
GSVIVT01023380001 assembled CDS                                       763   0.0  
GSVIVT01023373001 assembled CDS                                       409   e-114
GSVIVT01023355001 assembled CDS                                       330   1e-90
GSVIVT01023356001 assembled CDS                                       262   5e-70
GSVIVT01011657001 assembled CDS                                       214   9e-56
GSVIVT01028919001 assembled CDS                                       144   1e-34

>GSVIVT01023351001 assembled CDS
          Length = 680

 Score = 1086 bits (2808), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 524/661 (79%), Positives = 561/661 (84%), Gaps = 50/661 (7%)

Query: 1   MASTGQSQSLKRRDAPVTREGDQLTVTPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYS 60
           MASTG  QSLKR D+ +TREGDQL +TPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYS
Sbjct: 1   MASTGPPQSLKRPDSSLTREGDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKVIYKLLLT 120
           GMAALPYFDEIDPSTIDVLL+THFHLDHAASLPYFLEKTTFKGRVFMTHATK IYKLLL+
Sbjct: 61  GMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLS 120

Query: 121 DYVKVSKVSIEDMLFDEQDINRSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVD 180
           DYVKVSKVS+EDML+DEQDI RSMDKIEVIDFHQT+EVNGI+FWCYTAGHVLGAAMFMVD
Sbjct: 121 DYVKVSKVSVEDMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVD 180

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDICIIESTYGVQLHQPRHIREKRFTDVIHS 240
           IAGVRVLYTGDYSREEDRHLRAAE+PQFSPDICIIESTYGVQLHQPRH+REKRFTDVIHS
Sbjct: 181 IAGVRVLYTGDYSREEDRHLRAAEIPQFSPDICIIESTYGVQLHQPRHVREKRFTDVIHS 240

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEFWANHPELHNVPIYYASPLAKKCMTVYQTYILS 300
           TISQGGRVLIPAFALGRAQELLLILDE+W+NHPELHN+PIYYASPLAK+CM VYQTYI S
Sbjct: 241 TISQGGRVLIPAFALGRAQELLLILDEYWSNHPELHNIPIYYASPLAKRCMAVYQTYINS 300

Query: 301 MNERIRNQFANSNPFKFKHISPLNSIEDFTDVGPSVVMASPGGLQSGLSRQLFDMWCSDK 360
           MNERIRNQFANSNPF FKHISPL SIE+F DVGPSVVMASP GLQSGLSRQLFDMWCSDK
Sbjct: 301 MNERIRNQFANSNPFDFKHISPLKSIENFNDVGPSVVMASPSGLQSGLSRQLFDMWCSDK 360

Query: 361 KNACVIPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLRE 420
           KNACVIPGYVVEGTLAKTIINEPKE                                   
Sbjct: 361 KNACVIPGYVVEGTLAKTIINEPKE----------------------------------- 385

Query: 421 LMPPNIILVHGEANEMGRLKQKLITEFADGNTKIVTPKNCQSVEMVFNSEKMAKAIGKLA 480
                          MGRLKQKLIT+FAD NTKI++PKNCQSVEM FNSEKMAK IG+LA
Sbjct: 386 ---------------MGRLKQKLITQFADRNTKIISPKNCQSVEMYFNSEKMAKTIGRLA 430

Query: 481 EKTPEVGETVSGILVKKGFTYQMMAPEDLHVFSQLLTANITQRITIPFSGAFGVIKHRLE 540
           EKTP VGETVSG+LVKKGFTYQ+MAP+DLHVFSQL TAN+TQRITIP++GAFGVIKHRL+
Sbjct: 431 EKTPGVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYTGAFGVIKHRLK 490

Query: 541 QIYESVESGTDEESGVPTLQVHERVTVKQESDRHISLQWSADPISDMVSDSVVALVLNIS 600
           QIYESVES  DEES VP  +VHERVTVK ES++HISL W++DPISDMVSDS+VALVLNIS
Sbjct: 491 QIYESVESLPDEESEVPAFRVHERVTVKHESEKHISLHWTSDPISDMVSDSIVALVLNIS 550

Query: 601 REMPXXXXXXXXXXXXXXXXXXXXXXIYALLVSIFGDVKPGENGKLVISVDGNVAQLDKQ 660
           RE+P                      I+ALLVS+FGDVK GENG LVISVDGNVA LDKQ
Sbjct: 551 REIPKVVVESEAIKTEEENGKKAEKVIHALLVSLFGDVKLGENGNLVISVDGNVAHLDKQ 610

Query: 661 S 661
           +
Sbjct: 611 T 611


>GSVIVT01023380001 assembled CDS
          Length = 581

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/385 (92%), Positives = 371/385 (96%), Gaps = 1/385 (0%)

Query: 1   MASTGQSQSLKRRDAPVTREGDQLTVTPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYS 60
           MASTG SQSLKR D+ +TR GDQL +TPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYS
Sbjct: 1   MASTGPSQSLKRPDSSLTR-GDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYS 59

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKVIYKLLLT 120
           GMAALPYFDEIDPSTIDVLL+THFHLDHAASLPYFLEKTTFKGRVFMTHATK IYKLLL+
Sbjct: 60  GMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLS 119

Query: 121 DYVKVSKVSIEDMLFDEQDINRSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVD 180
           DYVKVSKVS+EDML+DEQDI RSMDKIEVIDFHQT+EVNGI+FWCYTAGHVLGAAMFMVD
Sbjct: 120 DYVKVSKVSVEDMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVD 179

Query: 181 IAGVRVLYTGDYSREEDRHLRAAEMPQFSPDICIIESTYGVQLHQPRHIREKRFTDVIHS 240
           IAGVRVLYTGDYSREEDRHLRAAE+PQF PDICIIESTYGVQLHQPRH+REKRFTDVIHS
Sbjct: 180 IAGVRVLYTGDYSREEDRHLRAAEIPQFCPDICIIESTYGVQLHQPRHVREKRFTDVIHS 239

Query: 241 TISQGGRVLIPAFALGRAQELLLILDEFWANHPELHNVPIYYASPLAKKCMTVYQTYILS 300
           TISQGGRVLIPA+ALGRAQELLLILDE+W+NHPELHNVPIYYASPLAK+CM VYQTYI S
Sbjct: 240 TISQGGRVLIPAYALGRAQELLLILDEYWSNHPELHNVPIYYASPLAKRCMAVYQTYINS 299

Query: 301 MNERIRNQFANSNPFKFKHISPLNSIEDFTDVGPSVVMASPGGLQSGLSRQLFDMWCSDK 360
           MNERIRNQFANSNPF FKHISPL SIE+F DVGPSVVMASPGGLQSGLSRQLFDMWCSDK
Sbjct: 300 MNERIRNQFANSNPFDFKHISPLKSIENFNDVGPSVVMASPGGLQSGLSRQLFDMWCSDK 359

Query: 361 KNACVIPGYVVEGTLAKTIINEPKE 385
           KNACVIPGYVV GTLAKTIINEPKE
Sbjct: 360 KNACVIPGYVVGGTLAKTIINEPKE 384



 Score =  262 bits (670), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 143/246 (58%), Positives = 162/246 (65%), Gaps = 40/246 (16%)

Query: 450 GNTKIVTPK-NCQSVEMVFNSEKMAKAIGKLAEKTPEVGETVSGILVKKGFTYQMMAPED 508
             T I  PK NCQSVEM FNSEKMAK IG+LAEKTPEVGETVSG+LVKKGFTYQ+MAP+D
Sbjct: 375 AKTIINEPKENCQSVEMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMAPDD 434

Query: 509 LHVFSQLLTANITQRITIPFSGAFGVIKHRLEQIYESVESGTDEESGVPTLQVHERVTVK 568
           LHVF QL TAN+TQRITIP++GAFG                                   
Sbjct: 435 LHVFWQLSTANVTQRITIPYTGAFG----------------------------------- 459

Query: 569 QESDRHISLQWSADPISDMVSDSVVALVLNISREMPXXXXXXXXXXXXXXXXXXXXXXIY 628
               +HISL W++DPISDMVSDS+VALVLNIS E+P                      I+
Sbjct: 460 ----KHISLHWTSDPISDMVSDSIVALVLNISLEIPKVIVESEAIKTEEENGKKAEKVIH 515

Query: 629 ALLVSIFGDVKPGENGKLVISVDGNVAQLDKQSGDVESENAGLKERVKTVFRRIQSAVRP 688
           ALLVS+FGDVK   NG LVISVDGNV  LDKQSG+VESEN GLKERV+  F+RIQ+AV+P
Sbjct: 516 ALLVSLFGDVKLEGNGNLVISVDGNVVHLDKQSGNVESENEGLKERVRVAFQRIQNAVKP 575

Query: 689 IPLSGS 694
           IP S S
Sbjct: 576 IPPSVS 581


>GSVIVT01023373001 assembled CDS
          Length = 314

 Score =  409 bits (1050), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 207/303 (68%), Positives = 228/303 (75%), Gaps = 16/303 (5%)

Query: 1   MASTGQSQSLKRRDAPVTREGDQLTVTPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYS 60
           MASTG SQSLKR D+ +TR GDQL +TPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYS
Sbjct: 1   MASTGPSQSLKRPDSSLTR-GDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYS 59

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASL-PYFLEKTTFKGRVFMTHATKVIYKLLL 119
            MAALPYFDEIDPSTIDVLL+T F  D    L P+ L   +   R         I  + L
Sbjct: 60  VMAALPYFDEIDPSTIDVLLVTQFDWDQLQVLHPHLLLSISGAIRSTADIFLNCIRGITL 119

Query: 120 TDYVKVSKVSIEDMLFDEQ--------------DINRSMDKIEVIDFHQTVEVNGIKFWC 165
                  +V       DE+               +   +  + VIDFHQT+EVNGI+FWC
Sbjct: 120 YKGRWPLQVPFLGFWRDERVNGPTHSLHKVSIHKLEHVLSYVRVIDFHQTLEVNGIRFWC 179

Query: 166 YTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAEMPQFSPDICIIESTYGVQLHQ 225
           YTAGHVLGAAMFMVDIAGVRVLYTGDYS EEDRHLRAAE+PQF PDICIIESTYGVQLHQ
Sbjct: 180 YTAGHVLGAAMFMVDIAGVRVLYTGDYSSEEDRHLRAAEIPQFCPDICIIESTYGVQLHQ 239

Query: 226 PRHIREKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEFWANHPELHNVPIYYASP 285
           PRH+REKRFTDVIHSTISQGGRVLIPA+ALGRAQELLLILDE+W+NHPELHN+P +   P
Sbjct: 240 PRHVREKRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPELHNIPYFMLPP 299

Query: 286 LAK 288
           L K
Sbjct: 300 LQK 302


>GSVIVT01023355001 assembled CDS
          Length = 184

 Score =  330 bits (847), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 156/184 (84%), Positives = 167/184 (90%)

Query: 1   MASTGQSQSLKRRDAPVTREGDQLTVTPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYS 60
           MASTG  QSLKR D+ +TR GDQ  +TPLGAGNEVGRSCVYMSYKGKTIL DCGIH AYS
Sbjct: 1   MASTGPPQSLKRSDSSLTRVGDQPIITPLGAGNEVGRSCVYMSYKGKTILIDCGIHRAYS 60

Query: 61  GMAALPYFDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKVIYKLLLT 120
           GMAALP F+EIDPSTIDVLL+THFHLDHAASLPYFLEKTTF G+VFMTHA K IYKLLL+
Sbjct: 61  GMAALPNFNEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFNGQVFMTHAMKAIYKLLLS 120

Query: 121 DYVKVSKVSIEDMLFDEQDINRSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVD 180
           DYVKVS VS+EDML+DEQDI RSMDKIEVIDFHQT+EVNGI+FWCYT GHVL AAMFMVD
Sbjct: 121 DYVKVSIVSVEDMLYDEQDILRSMDKIEVIDFHQTLEVNGIQFWCYTTGHVLSAAMFMVD 180

Query: 181 IAGV 184
           IAGV
Sbjct: 181 IAGV 184


>GSVIVT01023356001 assembled CDS
          Length = 159

 Score =  262 bits (669), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 127/159 (79%), Positives = 136/159 (85%), Gaps = 4/159 (2%)

Query: 291 MTVYQTYILSMNERIRNQFANSNPFKFKHISPLNSIEDFTDVGPSVVMASPGGLQSGLSR 350
           M++YQTYI SMNERIRNQF N NPF FK IS L SIE+  DVGPSVVMASP    SGLSR
Sbjct: 1   MSIYQTYINSMNERIRNQFENLNPFDFKPISHLKSIENLNDVGPSVVMASP----SGLSR 56

Query: 351 QLFDMWCSDKKNACVIPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHAD 410
           QLFDMWC DKKNACVI GYV+EG LAKTIINEPKEVTL+NGLT PLNMQV+YISFS HAD
Sbjct: 57  QLFDMWCFDKKNACVILGYVMEGILAKTIINEPKEVTLINGLTVPLNMQVYYISFSTHAD 116

Query: 411 YAQTSTFLRELMPPNIILVHGEANEMGRLKQKLITEFAD 449
           +AQTSTF++ELMPPNIILVHGEANEMGRLKQ LI    D
Sbjct: 117 FAQTSTFVKELMPPNIILVHGEANEMGRLKQNLIDRVQD 155


>GSVIVT01011657001 assembled CDS
          Length = 686

 Score =  214 bits (546), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 112/321 (34%), Positives = 175/321 (54%), Gaps = 15/321 (4%)

Query: 150 IDFHQTVEVN-GIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAEMPQF 208
           +D  QTV+V+  ++   Y AGHVLGAAMF   +    ++YTGDY+   DRHL AA++ + 
Sbjct: 190 VDLKQTVQVDKDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRL 249

Query: 209 SPDICIIESTYGVQLHQPRHIREKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEF 268
             D+ I ESTY   +   ++ RE+ F   +H  ++ GG+VLIP FALGRAQEL ++LD +
Sbjct: 250 QLDLLITESTYATTVRDSKYAREREFLKAVHKCVADGGKVLIPTFALGRAQELCILLDNY 309

Query: 269 WANHPELHN--VPIYYASPLAKKCMTVYQTYILSMNERIRNQFANSNPFKFKHISPLNSI 326
           W    E  N  VPIY+++ L  +    Y+  I   N+R++  +A  N F FK++   +  
Sbjct: 310 W----ERMNLKVPIYFSAGLTIQANMYYKMLISWTNQRVKETYATHNAFDFKNVRSFDR- 364

Query: 327 EDFTDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNACVIPGYVVEGTLA-KTIINEPKE 385
                 GP V+ A+PG +  G S ++F +W   + N   +PGY + GT+  K    +P +
Sbjct: 365 SLINAPGPCVLFATPGMISGGFSLEVFKLWAPSEMNLVTLPGYCLAGTIGHKLTTGKPTK 424

Query: 386 VTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLRELMPPNIILVHGEANEMGRLKQKLIT 445
           + L   +   +  Q+H +SFS H D       ++ L P ++ILVHGE  +M  LK K+ +
Sbjct: 425 IDLDKDIQISVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMASLKGKIES 484

Query: 446 E------FADGNTKIVTPKNC 460
           +      +   N  +  P  C
Sbjct: 485 DLGIQCYYPANNDTVCIPSTC 505



 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 5/85 (5%)

Query: 29  LGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPS-----TIDVLLITH 83
           LGAG EVG+SC  ++  GK I+FDCG+H  Y      P F  I  S      ID ++ITH
Sbjct: 8   LGAGQEVGKSCAVVTINGKRIMFDCGMHMGYLDHRRFPDFSLISKSADFNTAIDCIVITH 67

Query: 84  FHLDHAASLPYFLEKTTFKGRVFMT 108
           FHLDH  +LPYF E   + G ++MT
Sbjct: 68  FHLDHVGALPYFTEVCGYSGPIYMT 92


>GSVIVT01028919001 assembled CDS
          Length = 740

 Score =  144 bits (364), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 185/387 (47%), Gaps = 43/387 (11%)

Query: 21  GDQLTVTPL-GAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDEIDPS----- 74
           G  + VTPL G  NE   S + +S  G   L DCG            + D  DPS     
Sbjct: 2   GTSVQVTPLCGVYNENPLSYL-VSIDGFNFLVDCG------------WNDHFDPSFLQPL 48

Query: 75  -----TIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKVIYKL-LLTDYVK-VSK 127
                TID +L+ H    H  +LPY +++      V+   +T+ +Y+L LLT Y + +S+
Sbjct: 49  ARVASTIDAVLLAHPDTLHLGALPYAMKQLGLSAPVY---STEPVYRLGLLTMYDQYLSR 105

Query: 128 VSIEDM-LFDEQDINRSMDKIEVIDFHQTVEV----NGIKFWCYTAGHVLGAAMFMVDIA 182
             + D  LF   DI+ +   +  + + Q   +     GI    + AGH+LG  ++ +   
Sbjct: 106 KQVSDFDLFTLDDIDSAFQNVTRLTYSQNYHLFGKGEGIVIAPHVAGHLLGGTVWKITKD 165

Query: 183 GVRVLYTGDYSREEDRHLRAAEMPQFSPDICIIESTYGVQLHQP-RHIREKRFTDVIHST 241
           G  V+Y  D++  ++R L    +  F     +I   Y    +QP R  R++ F DVI  T
Sbjct: 166 GEDVIYAVDFNHRKERLLNGTVLESFVRPAVLITDAYNALNNQPSRRQRDQEFLDVILKT 225

Query: 242 ISQGGRVLIPAFALGRAQELLLILDEFWANHPELH-NVPIYYASPLAKKCMTVYQTYILS 300
           +   G VL+P    GR  EL+LIL+++W  H   H N PI++ + +A   +   ++++  
Sbjct: 226 LRGDGNVLLPVDTAGRVLELMLILEQYWTQH---HLNYPIFFLTYVASSTIDYVKSFLEW 282

Query: 301 MNERIRNQFANS--NPFKFKHISPLNSIEDFTDV--GPSVVMASPGGLQSGLSRQLFDMW 356
           M++ I   F ++  N F  KH++ L S  +   V  GP +V+AS   L++G S  +F  W
Sbjct: 283 MSDSIAKSFEHTRDNAFLLKHVTLLISKSELEKVPDGPKIVLASMASLEAGFSHDIFVEW 342

Query: 357 CSDKKNACVIPGYVVEGTLAKTIINEP 383
            +D KN  +        TLA+ +  +P
Sbjct: 343 ATDAKNLVLFSERGQFATLARMLQADP 369