Jatropha Genome Database
- JcCA0142811.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0142811.10 + phase: 0 /partial
(166 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01012250001 assembled CDS 146 4e-36
GSVIVT01036549001 assembled CDS 139 4e-34
GSVIVT01008140001 assembled CDS 132 6e-32
GSVIVT01012249001 assembled CDS 83 5e-17
GSVIVT01008139001 assembled CDS 76 6e-15
GSVIVT01027577001 assembled CDS 73 8e-14
GSVIVT01036551001 assembled CDS 68 2e-12
GSVIVT01010521001 assembled CDS 67 5e-12
GSVIVT01018450001 assembled CDS 65 1e-11
GSVIVT01027579001 assembled CDS 59 9e-10
GSVIVT01012110001 assembled CDS 59 2e-09
GSVIVT01008560001 assembled CDS 57 3e-09
GSVIVT01021303001 assembled CDS 55 1e-08
GSVIVT01000802001 assembled CDS 52 1e-07
GSVIVT01026207001 assembled CDS 51 2e-07
GSVIVT01001437001 assembled CDS 50 5e-07
GSVIVT01018446001 assembled CDS 50 5e-07
GSVIVT01025945001 assembled CDS 50 7e-07
GSVIVT01019883001 assembled CDS 49 8e-07
GSVIVT01009219001 assembled CDS 49 2e-06
GSVIVT01038474001 assembled CDS 46 8e-06
>GSVIVT01012250001 assembled CDS
Length = 241
Score = 146 bits (368), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/131 (54%), Positives = 104/131 (79%), Gaps = 2/131 (1%)
Query: 1 MERILERYERYSFSER--APNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTL 58
ME+IL+RYERYS++ER D ESQ NW +E KLKA+I +L+RS R+ GEDLDS++L
Sbjct: 63 MEKILDRYERYSYAERQLTATDPESQGNWSLEYSKLKAKIELLQRSQRHFLGEDLDSLSL 122
Query: 59 RELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQKKLAED 118
+ELQ+LE Q+D ALK +RSRKNQL ++S+ ELQ++E+++ +QNN+L+K+++E +K +A+
Sbjct: 123 KELQNLEQQLDTALKHIRSRKNQLMYESISELQRKEKAMQEQNNMLAKEIKEKEKTVAQQ 182
Query: 119 AQWEQQNLGQN 129
WEQQN G N
Sbjct: 183 THWEQQNHGLN 193
>GSVIVT01036549001 assembled CDS
Length = 247
Score = 139 bits (351), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 104/133 (78%), Gaps = 4/133 (3%)
Query: 1 MERILERYERYSFSER--APNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTL 58
MERILERYERYS SER D + Q NW ++ PKL ARI +L+R+LR+ GEDLD ++L
Sbjct: 63 MERILERYERYSLSERQLLSTDPDPQGNWSMDYPKLTARIEVLQRNLRHFVGEDLDPLSL 122
Query: 59 RELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQKKLAED 118
RELQ+LE Q+D ALKR+R+RKNQL H+S+ ELQK+E+SL +QNN L+K+++E +K +
Sbjct: 123 RELQNLEQQLDTALKRIRTRKNQLMHESISELQKKEKSLVEQNNALAKKVKEKEKVEQNN 182
Query: 119 -AQWEQQ-NLGQN 129
AQWEQQ N+GQN
Sbjct: 183 RAQWEQQNNIGQN 195
>GSVIVT01008140001 assembled CDS
Length = 243
Score = 132 bits (333), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 99/127 (77%), Gaps = 2/127 (1%)
Query: 1 MERILERYERYSF--SERAPNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTL 58
MERILERYERY++ S+ D ESQ +W +E KLKAR+ +L++S RN GEDLDS++L
Sbjct: 63 MERILERYERYAYAQSQLIATDLESQGSWTLEYAKLKARMEVLQKSQRNFMGEDLDSLSL 122
Query: 59 RELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQKKLAED 118
+ELQ+LE Q+DN+LK R+RKNQL ++SL EL K+ ++L ++++LL+ +++E +K+ AE
Sbjct: 123 KELQNLEQQLDNSLKSTRTRKNQLMYESLSELHKKGKALQEEHDLLTAKVQEKEKEQAEQ 182
Query: 119 AQWEQQN 125
AQW QQN
Sbjct: 183 AQWNQQN 189
>GSVIVT01012249001 assembled CDS
Length = 243
Score = 83.2 bits (204), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 75/123 (60%), Gaps = 1/123 (0%)
Query: 1 MERILERYERYSFSE-RAPNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTLR 59
M LERY+R S+S A + +N E KLK+++ +L+R+ RN GEDL + +
Sbjct: 63 MPETLERYQRCSYSALEASQPAKETQNSYQEYLKLKSKVEVLQRTQRNFLGEDLGHLGTK 122
Query: 60 ELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQKKLAEDA 119
EL+ LEHQ+D +LK++RS K Q D L +LQ++E+ L + NN L ++L E+ + +
Sbjct: 123 ELEQLEHQLDKSLKQIRSTKTQFMLDQLSDLQRKEQILMEANNALRRKLGESSAESGLGS 182
Query: 120 QWE 122
WE
Sbjct: 183 TWE 185
>GSVIVT01008139001 assembled CDS
Length = 246
Score = 76.3 bits (186), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Query: 1 MERILERYERYSFS--ERAPNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTL 58
M + LE+Y++ S+ E + E ++ E KLK R+ +L+RS R+L GEDLD +
Sbjct: 63 MAKTLEKYQKCSYGALEASQPVYELTQSSYQEYLKLKTRVEVLQRSQRHLLGEDLDPLNT 122
Query: 59 RELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQKKLAED 118
+EL+ LEHQ++ +LK++RS K Q D L +LQ +E L + NN L ++LEE+ K
Sbjct: 123 KELEQLEHQLEMSLKQIRSTKTQNMLDQLADLQNKEHMLIEANNALRRKLEESNGKHPLQ 182
Query: 119 AQWE 122
WE
Sbjct: 183 QSWE 186
>GSVIVT01027577001 assembled CDS
Length = 244
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 72/120 (60%), Gaps = 1/120 (0%)
Query: 3 RILERYERYSFSERAPNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTLRELQ 62
+ LERY+R ++ + N ++W E KLKA+ L+R+ R+L GEDL ++++ELQ
Sbjct: 64 KTLERYQRVCYTPQDNNMECETQSWYQEVSKLKAKYESLQRTQRHLLGEDLGPLSVKELQ 123
Query: 63 HLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLE-ENQKKLAEDAQW 121
+LE Q++ AL + R RK Q+ + + +L+++ER L D N L +LE E Q A W
Sbjct: 124 NLEKQLEGALAQARQRKTQMMIEQMEDLRRKERQLGDLNKQLKLKLEAEGQSLKAIQGSW 183
>GSVIVT01036551001 assembled CDS
Length = 243
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 1 MERILERYERYSFS----ERAPNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSM 56
M + LERY++ S+ R + ES E KLK++ L+R+ RNL GEDL +
Sbjct: 63 MLKTLERYQKCSYGAVEVSRPSKELESSYR---EYLKLKSKFESLQRTQRNLLGEDLGPL 119
Query: 57 TLRELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQKKLA 116
+EL+ LE Q++ +LK+VRS K Q D L +LQ +E+ L + N L+++L+E K
Sbjct: 120 NTKELEQLERQLETSLKQVRSTKTQFMLDQLSDLQNKEQVLVESNKALTRKLDEISVKNH 179
Query: 117 EDAQWE 122
WE
Sbjct: 180 LQLSWE 185
>GSVIVT01010521001 assembled CDS
Length = 242
Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 70/118 (59%), Gaps = 11/118 (9%)
Query: 1 MERILERYERYSF-------SERAPNDTESQENWPVECPKLKARIGILERSLRNLAGEDL 53
M + LERY++ ++ S R + SQ+ + KLKAR L+RS RNL GEDL
Sbjct: 63 MLKTLERYQKCNYGAPETNVSTREALELSSQQEYL----KLKARYEALQRSQRNLLGEDL 118
Query: 54 DSMTLRELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEEN 111
++ +EL+ LE Q+D +LK++RS + Q D L +LQ++E L++ N L ++L E
Sbjct: 119 GPLSTKELESLERQLDVSLKQIRSTRTQYMLDQLTDLQRKEHMLNEANKTLKQRLLEG 176
>GSVIVT01018450001 assembled CDS
Length = 249
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 74/131 (56%), Gaps = 2/131 (1%)
Query: 1 MERILERYERYSFSERAPNDTE-SQENWPVECPKLKARIGILERSLRNLAGEDLDSMTLR 59
M + +ERY R ++ R ND E ++ E KLKA+ L S R+L GEDL ++++
Sbjct: 62 MTKTIERYRRCCYASRDNNDAEHDRQIGHEEYSKLKAKYESLMDSQRHLLGEDLGLLSIK 121
Query: 60 ELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQKKL-AED 118
ELQ+LE ++ L + R RK Q+ + EL+K+E L + N L+ +LEE ++ + +
Sbjct: 122 ELQNLEKMLEGTLSQARQRKAQMMLKQMDELKKKEHDLEEMNKQLTSKLEELEECVRVIE 181
Query: 119 AQWEQQNLGQN 129
A W+ + N
Sbjct: 182 ASWDSGTVAGN 192
>GSVIVT01027579001 assembled CDS
Length = 218
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 1 MERILERYERYSFSERAPNDTESQENW---PVECPKLKARIGILERSLRNLAGEDLDSMT 57
M+ +ERY+R++ N ++ N E + +I +LE S R L GE L S +
Sbjct: 62 MQETIERYQRHTKDVHTNNYKTTEHNMQHLKHEAANMAKKIELLEISKRKLLGEGLGSCS 121
Query: 58 LRELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQ 107
+ ELQ +E Q++ ++ +R+RKNQ++ + + +L+++E++L +N +L ++
Sbjct: 122 IEELQQIEQQLERSVSSIRARKNQVFKEQIEQLKEKEKALAAENAMLCEK 171
>GSVIVT01012110001 assembled CDS
Length = 256
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 73/129 (56%), Gaps = 6/129 (4%)
Query: 1 MERILERYERYSFSERAPND--TESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTL 58
ME+I+ RY+R + + + D + E E +++ L+ SL+ G+DL S+
Sbjct: 64 MEQIIRRYQRVTGTHISKQDNRVGAIEQLHNEITRMRNETHNLQLSLQRYTGDDLSSIQF 123
Query: 59 RELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQKKLAED 118
++L+ LE Q+++++K+VR+RK QL + LQ++ + L D+N + ++E Q+
Sbjct: 124 KDLEELEQQLEHSIKKVRARKYQLLQQQIDNLQRKAKMLEDENEQICHWIQEKQQV---- 179
Query: 119 AQWEQQNLG 127
A EQQ LG
Sbjct: 180 AAMEQQQLG 188
>GSVIVT01008560001 assembled CDS
Length = 235
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 55/85 (64%)
Query: 25 ENWPVECPKLKARIGILERSLRNLAGEDLDSMTLRELQHLEHQIDNALKRVRSRKNQLYH 84
E W E L+ I LE ++LAGEDL ++ ++EL+ LE Q+ N ++R+R++K ++
Sbjct: 88 EFWMSEIDNLRRTIDTLEAKHKHLAGEDLSTLGMKELKQLERQLKNGVERIRAKKRRIIS 147
Query: 85 DSLLELQKQERSLHDQNNLLSKQLE 109
+ + L+K++R+L + N L K+++
Sbjct: 148 EHISLLKKRQRALQEDNTRLQKKVK 172
>GSVIVT01021303001 assembled CDS
Length = 226
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
Query: 1 MERILERYERYSFSERAPNDTESQEN---WPVECPKLKARIGILERSLRNLAGEDLDSMT 57
++ +ERY++ S ++ + + S+ N + E KL +I L+ S R++ GE L S+
Sbjct: 62 VKSTIERYKKAS-ADSSNTGSVSEANAQFYQQESSKLHQQIRNLQNSNRHMLGESLGSLN 120
Query: 58 LRELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQK 113
++L+ LE +++ + R+RSRKN+L + +QK+E LH+ N L ++ EN++
Sbjct: 121 FKDLKSLEIRLEKGISRIRSRKNELLFAEIEYMQKREIDLHNDNQYLRARIAENER 176
>GSVIVT01000802001 assembled CDS
Length = 363
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 70/126 (55%), Gaps = 9/126 (7%)
Query: 5 LERYERYSFSERAPNDTESQEN---WPVECPKLKARIGILERSLRNLAGEDLDSMTLREL 61
+ERY++ S+ + + S+ N + E KL+ +I ++ R++ GE L S+ +EL
Sbjct: 155 IERYKKVC-SDSSNTGSVSEANAQFYQQEASKLRRQIRDIQNLNRHILGEALSSLNFKEL 213
Query: 62 QHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEEN-----QKKLA 116
++LE +++ + R+RS+KN+L + +QK+E L + N L Q+ EN Q L
Sbjct: 214 KNLETRLEKGISRIRSKKNELLFAEIEYMQKREIELQNSNLFLRAQIAENERAQQQMNLM 273
Query: 117 EDAQWE 122
+Q+E
Sbjct: 274 PGSQYE 279
>GSVIVT01026207001 assembled CDS
Length = 218
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Query: 1 MERILERYERYSFSERAPNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTLRE 60
M++I+ERY++ + + R P + +S+E E +++ L+RS+R GEDL S+ +
Sbjct: 64 MDQIIERYQKVTGT-RIP-EHDSREQIYNELTRMRKETSRLQRSMRGYTGEDLSSIPYED 121
Query: 61 LQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEENQKKL 115
L LE Q++++ +VR+RKNQL L L+++E+ L ++N+ + ++EN+ L
Sbjct: 122 LDQLEQQLEHSADKVRARKNQLLQQQLDNLRRKEQMLEEENSKMYHWIKENRAAL 176
>GSVIVT01001437001 assembled CDS
Length = 248
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 1 MERILERYERYSFSERAPNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTLRE 60
M+RI+ RY + SE A + ++ E P E LK I L+ L G+DL ++L+E
Sbjct: 62 MKRIISRYNKLDSSEGALVEYKA-EQEPKEVDILKDEIRKLQTRQLQLLGKDLSGLSLKE 120
Query: 61 LQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQLEE 110
LQ+LE Q++ +L V+ RK Q+ + L + + QE+ +N L +Q+EE
Sbjct: 121 LQNLEQQLNESLLSVKERKEQVLMEQLEQSRVQEQRAVLENETLRRQVEE 170
>GSVIVT01018446001 assembled CDS
Length = 203
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 1 MERILERYERYS--FSERAPNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTL 58
M+ +ERY ++ P + +N + + +I +LE S R L G+ L S +L
Sbjct: 55 MQSAIERYREHAKQVETNNPELEQYMQNLKQDAESMAKKIELLEVSQRKLLGQGLSSCSL 114
Query: 59 RELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQNNLLSKQ 107
E+ ++ Q++ +LK +R+RK Q++ + + EL+++E+ L ++N LS++
Sbjct: 115 DEILEIDSQLEKSLKSIRARKAQIFQEQIEELKEREKQLLEENARLSQK 163
>GSVIVT01025945001 assembled CDS
Length = 233
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 61/97 (62%), Gaps = 7/97 (7%)
Query: 30 ECPKLKARIGILERSLRNLAGEDLDSMTLRELQHLEHQIDNALKRVRSRKNQLYHDSLLE 89
E KL+ +I +L+ S R+L G+ L S+T++EL+ LE++++ + R+RS+K++L +
Sbjct: 93 ESAKLRQQIQMLQNSNRHLMGDSLASLTVKELKQLENRLERGITRIRSKKHELLLAEIEY 152
Query: 90 LQKQERSLHDQNNLLSKQLEENQKKLAEDAQWEQQNL 126
LQK+E L +++ L + K+AE + +Q N+
Sbjct: 153 LQKREIELENESVYL-------RTKIAEVERLQQANM 182
>GSVIVT01019883001 assembled CDS
Length = 207
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 1 MERILERYER----YSFSERAPNDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSM 56
+ + +ERY+ S+R + E Q + E L +I +LE S R L GE LDS
Sbjct: 55 INKTIERYQSKAKGLGISKRGAPENE-QHHLEGETVDLAKKIELLEVSKRRLLGECLDSC 113
Query: 57 TLRELQHLEHQIDNALKRVRSRKNQLYHDSLLELQKQERSLHDQN 101
++ ELQ +E++++ +L +R +KN L + L++QER L ++N
Sbjct: 114 SIEELQQIENELEQSLSNIRIQKNHLCKGHIERLKEQERILGEEN 158
>GSVIVT01009219001 assembled CDS
Length = 240
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 57/90 (63%)
Query: 19 NDTESQENWPVECPKLKARIGILERSLRNLAGEDLDSMTLRELQHLEHQIDNALKRVRSR 78
N T + W E L+ ++ L+ + R + GE+L +++++LQ+LE+Q++ +L+ VR +
Sbjct: 81 NPTSEVKFWQREAAMLRQQLQHLQENHRQMMGEELSGLSVKDLQNLENQLEMSLRGVRMK 140
Query: 79 KNQLYHDSLLELQKQERSLHDQNNLLSKQL 108
K+Q+ D + EL ++ LH++N L K++
Sbjct: 141 KDQILIDEIQELNQKGNLLHNENVELYKKV 170
>GSVIVT01038474001 assembled CDS
Length = 237
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 52/83 (62%)
Query: 27 WPVECPKLKARIGILERSLRNLAGEDLDSMTLRELQHLEHQIDNALKRVRSRKNQLYHDS 86
W E L+ ++ L+ + R L GE+L + +++LQ+LE+Q++ +LK VR +K ++ D
Sbjct: 89 WQREAASLRQQLQYLQDTHRQLLGEELSGLGIKDLQNLENQLEMSLKGVRMKKEKILTDE 148
Query: 87 LLELQKQERSLHDQNNLLSKQLE 109
+ EL ++ +H +N L K+++
Sbjct: 149 IRELNQKGSLIHQENIDLYKKVD 171