Jatropha Genome Database
- JcCA0142031.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0142031.30 - phase: 1 /pseudo/partial
(380 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01026912001 assembled CDS 511 e-145
GSVIVT01026904001 assembled CDS 191 4e-49
GSVIVT01021505001 assembled CDS 97 9e-21
GSVIVT01015512001 assembled CDS 85 6e-17
GSVIVT01025417001 assembled CDS 84 1e-16
GSVIVT01010443001 assembled CDS 73 2e-13
GSVIVT01022227001 assembled CDS 67 2e-11
GSVIVT01035518001 assembled CDS 65 4e-11
GSVIVT01008973001 assembled CDS 59 3e-09
>GSVIVT01026912001 assembled CDS
Length = 359
Score = 511 bits (1316), Expect = e-145, Method: Compositional matrix adjust.
Identities = 252/376 (67%), Positives = 293/376 (77%), Gaps = 17/376 (4%)
Query: 5 VEHMEGGSERISQLEESQGPLICGIPDDIALFCLARVPRKYHTVLKCVCRRWRDLVCNAE 64
+E +E E IS++E +Q PLICG+PDDIAL CLARVPRKYHT+LKCV RRWRDLV + E
Sbjct: 1 MELLESELEGISRIELAQSPLICGLPDDIALICLARVPRKYHTLLKCVSRRWRDLVSSEE 60
Query: 65 WHAYRGKHNLSETWIYALCRDKFERICCYVLDPDSSRRSWKLIQGLPPRCLKRKGIGFEA 124
WHAYR KH L E WIYALCRDKFER+CCYVLDP S+RRSWKLI+G PPR LKRKG+ FE
Sbjct: 61 WHAYRQKHKLDEPWIYALCRDKFERVCCYVLDPYSTRRSWKLIEGFPPRSLKRKGMSFEV 120
Query: 125 LGKKLLSVRWLWLVGRCY**SLLL*YF*QLMD*SCFLVYCKKLKNNFGIVKLPTPLFRCY 184
LGKK+ +L+G C ++ + VY N P RCY
Sbjct: 121 LGKKV------YLLGGC-----------GWLEDATDEVYSYDASTNRWSEAAPLSTARCY 163
Query: 185 FACEVLDGRIYAIGGLGSKLSDPHSWDTFDPHKNSWESHSDGNVIPDVEDSIVLDGKIYI 244
FACEVL+G+IYAIGGLGSK +DPHSWDT++PH NSW+SH D N++PD+EDSIVLD KIYI
Sbjct: 164 FACEVLNGKIYAIGGLGSKSNDPHSWDTYNPHTNSWKSHLDPNIVPDIEDSIVLDEKIYI 223
Query: 245 RCGASSVSSHVYAVLYEPSNGTWQHADADMVSGWRGPAVVVDGTLYVLDQSSGTRLMMWQ 304
RCG S ++SHVYAV+Y PS+GTWQHADADMV GW+GPAVVVDGTLYVLDQ GTRLMMWQ
Sbjct: 224 RCGTSGLTSHVYAVVYNPSHGTWQHADADMVLGWQGPAVVVDGTLYVLDQRLGTRLMMWQ 283
Query: 305 KDKRVWVAVGRLSALLTRPPCRLVATGKRIFIIGKGLSTVVFDIDKTGNMEGVLVSSSIP 364
K+ R WVAVGRLS LLT PPCRLVA GK IF+IGKGLSTVVFDI GNM GV+VSSSIP
Sbjct: 284 KESRKWVAVGRLSPLLTCPPCRLVAIGKSIFVIGKGLSTVVFDIGNVGNMGGVMVSSSIP 343
Query: 365 RINSEDDIISCKCVAL 380
++ S+DD+ISCK +A+
Sbjct: 344 KLTSDDDVISCKILAI 359
>GSVIVT01026904001 assembled CDS
Length = 161
Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 119/170 (70%), Gaps = 17/170 (10%)
Query: 120 IGFEALGKKLLSVRWLWLVGRCY**SLLL*YF*QLMD*SCFLVYCKKLKNNFGIVKLPTP 179
+ FE LGKK+ +L+G C ++ + VY N P
Sbjct: 1 MSFEVLGKKV------YLLGGC-----------GWLEDATDEVYSYDASTNRWSEAAPLS 43
Query: 180 LFRCYFACEVLDGRIYAIGGLGSKLSDPHSWDTFDPHKNSWESHSDGNVIPDVEDSIVLD 239
RCYFACEVL+G+IYAIGGLGSK +DPHSWDT++PH NSW+SHSD N++PD+ED+IVLD
Sbjct: 44 TARCYFACEVLNGKIYAIGGLGSKSNDPHSWDTYNPHTNSWKSHSDPNIVPDIEDTIVLD 103
Query: 240 GKIYIRCGASSVSSHVYAVLYEPSNGTWQHADADMVSGWRGPAVVVDGTL 289
KIYIRCG S+++SHVY V+Y PS+GTWQHADADMV GW+GPAVVVDG L
Sbjct: 104 EKIYIRCGTSALTSHVYVVVYNPSHGTWQHADADMVLGWQGPAVVVDGIL 153
>GSVIVT01021505001 assembled CDS
Length = 429
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 140/334 (41%), Gaps = 35/334 (10%)
Query: 24 PLICGIPDDIALFCLARVPRKYHTVLKCVCRRWRDLVCNAE-WHAYRGKHNLSETWIYAL 82
PLI G+PDDIAL CL R+P + H + VC+RW L+ N E + R + + W++
Sbjct: 61 PLIPGLPDDIALNCLLRLPVQSHAACRAVCKRWHLLLGNKERFFTRRKELGFQDPWLFVF 120
Query: 83 CRDKFE-RICCYVLDPDSSRRSWKLIQGLP------PRCLKRKGIGFEALGKKLLSVRWL 135
K +I VLD + SW I +P P + I E L
Sbjct: 121 AFHKCTGKIQWQVLDLN--HFSWHTIPAMPCKDKVCPHGFRCVSIPHEGA---------L 169
Query: 136 WLVGRCY**SLLL*YF*QLMD*SCFLVYCKKLKNNFGIVKLPTPLFRCYFACEVLDGRIY 195
++ G +D LV +++ N V R +FA V+DG IY
Sbjct: 170 FVCGGMV----------SDVDCPLDLVLKYEMQKNRWTVMSQMITARSFFATGVIDGMIY 219
Query: 196 AIGGLGSKLSDPHSWDTFDPHKNSWESHSDGNVIPDVEDSIVLDGKIYIRCG---ASSVS 252
A GG S L + + DP K W + D+ VL+GK+ + G VS
Sbjct: 220 AAGGNSSDLFELDLAEVLDPVKGIWSPIASMGTNMASYDAAVLNGKLLVTEGWLWPFFVS 279
Query: 253 SHVYAVLYEPSNGTWQHADADMVSGWRGPAVVVDGTLYVLDQSSGTRLMMWQKDKRVWVA 312
+Y+P W++ A + GW G +VVV G L+V+ + +L ++ + W
Sbjct: 280 PR--GQVYDPRTNNWENMAAGLREGWTGSSVVVYGHLFVVSEHERMKLKVYDMESDNWET 337
Query: 313 V-GRLSALLTRPPCRLVATGKRIFIIGKGLSTVV 345
V G P + A +I+++G+ L V
Sbjct: 338 VEGPALPEQICKPFSVNACDCKIYVVGRNLHVAV 371
>GSVIVT01015512001 assembled CDS
Length = 398
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 117/259 (45%), Gaps = 23/259 (8%)
Query: 21 SQGPLICGIPDDIALFCLARVPRKYHTVLKCVCRRWRDLVCNAEWHAYRGKHNLSETWIY 80
SQ PL+ G+PDD+A+ CL RVPR H L+ VC+RW L+ +++ R ++E WIY
Sbjct: 63 SQSPLLPGLPDDLAIACLIRVPRIEHRKLRLVCKRWYRLLVGNFYYSLRKNLGIAEEWIY 122
Query: 81 ALCRDKFERICCYVLDPDSSRRSWKLIQGLPPRCLK-RKGIGFEALGKKLLSVRWLWLVG 139
+ RD+ +I + DP ++L Q LPP + + +GF G +LS L+L G
Sbjct: 123 VIKRDREGKISWHAFDP-----IYQLWQPLPPVPKEYSEALGF---GCAVLSGCHLYLFG 174
Query: 140 RCY**SLLL*YF*QLMD*SCFLVYCKKLKNNFGIVKLPTPLFRCYFACEVLDGRIYAIGG 199
+ S V + N R +F V++ +Y GG
Sbjct: 175 GK-----------DPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAGG 223
Query: 200 LGSKLSDP-HSWDTFDPHKNSWESHSDGNVIPDVEDSIVLDGKIYIRCGASSVSSHVYAV 258
+ S + +DP++N W SD + +V +GK +++ S V +
Sbjct: 224 ENEGMHRSLRSAEVYDPNRNRWSFISDMSTAMVPFIGVVYEGKWFLKGLGS--HRQVLSE 281
Query: 259 LYEPSNGTWQHADADMVSG 277
+Y+P +W MV+G
Sbjct: 282 VYQPETDSWYPVYDGMVAG 300
>GSVIVT01025417001 assembled CDS
Length = 412
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 138/329 (41%), Gaps = 44/329 (13%)
Query: 22 QGPLICGIPDDIALFCLARVPRKYHTVLKCVCRRWRDLVCNAEWHAYRGKHNLSETWIYA 81
Q PL+ G+PDD+A+ CL RVPR H L+ VC+RW L+ +++ R ++E W+Y
Sbjct: 74 QPPLLPGLPDDLAIACLIRVPRVEHRKLRLVCKRWHRLLSGNFFYSLRKSLGMAEEWVYV 133
Query: 82 LCRDKFERICCYVLDPDSSRRSWKLIQGLPPRCLK-RKGIGFEALGKKLLSVRWLWLVGR 140
+ RD+ RI + DP +++L Q LPP ++ + +GF G +LS L+L G
Sbjct: 134 IKRDRDGRISWHAFDP-----TYQLWQPLPPVPVEYSEALGF---GCAVLSGCNLYLFGG 185
Query: 141 CY**SLLL*YF*QLMD*SCFLVYCKKLKNNFGIVKLPTPLFRCYFACEVLDGRIYAIGGL 200
M S V + N R +F V++ +Y GG
Sbjct: 186 K-----------DPMKRSLRRVIFYSARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGE 234
Query: 201 GSKLSDP-HSWDTFDPHKNSWESHSDGNVIPDVEDSIVLDGKIYIRCGASSVSSHVYAVL 259
+ S + +DP++N W SD + ++ +GK +++ S V +
Sbjct: 235 CEGIQRTLRSAEVYDPNRNRWSFISDMSTAMVPFIGVIYNGKWFLKGLGS--HREVMSEA 292
Query: 260 YEPSNGTWQHADADMVSGWRGPAVVVDGTLYVLDQSSGTRLMMWQKDKRVWVAVGRLSAL 319
Y P TW + DG L V D + + W K + +G AL
Sbjct: 293 YIPETNTW--------------TPISDGMLRVYDSDTDS----WNKFIDSKLHLGSSRAL 334
Query: 320 LTRPPCRLVATGKRIFIIGKGLSTVVFDI 348
LV ++ II +S + D+
Sbjct: 335 EA---AALVPLNGKLCIIRNNMSISIVDV 360
>GSVIVT01010443001 assembled CDS
Length = 385
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 112/266 (42%), Gaps = 49/266 (18%)
Query: 19 EESQGPLICGIPDDIALFCLARVPRKYHTVLKCVCRRWRDLVCNAEWHAYRGKHNLSETW 78
++S GP++ G+PDD+A +CLA VPR + V ++WR + + E+ R + E W
Sbjct: 42 DDSYGPILPGLPDDVAKYCLALVPRSNFPAMGGVSKKWRSFIRSKEFITVRKLAGMLEEW 101
Query: 79 IYALCRDKFERICCYVLDPDSSRRSWKLI-------QGLPPRCLKRKGIGFE--ALGKKL 129
+Y L +D + W+++ Q LPP K GFE L KL
Sbjct: 102 LYVL-----------TMDAEGKGSHWEVLDCLGHKHQLLPPMPGPVK-TGFEVVVLNGKL 149
Query: 130 LSVRWLWLVGRCY**SLLL*YF*QLMD*SCFLVYCKKLKNNFGIVKLPTPLFRCYFACEV 189
L + +VGR S + + SC + K N R FAC
Sbjct: 150 LVMAGCSVVGRTGSASADVYQY-----DSCLNSWSKLANMNVA---------RYDFACAE 195
Query: 190 LDGRIYAIGGLGSKLSDPHSWDTFDPHKNSWESHSDGNVIPDVED------SIVLDGKIY 243
++G +YA+GG G+ S + +D + W +I + + +GK+Y
Sbjct: 196 VNGMVYAVGGYGADGDSLSSAEMYDADADKWI------LIESLRRPRYGCFACGFEGKLY 249
Query: 244 IRCGASS--VSSHVYAVLYEPSNGTW 267
+ G SS + + + +Y P TW
Sbjct: 250 VMGGRSSFTIGNSRFVDVYNPERHTW 275
>GSVIVT01022227001 assembled CDS
Length = 344
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 111/273 (40%), Gaps = 52/273 (19%)
Query: 25 LICGIPDDIALFCLARVPRKYHTVLKCVCRRWRDLVCNAEWHAYRGKHNLSETWIYALCR 84
LI +PDD+AL C+ARVPR H L VC+ WR ++ + ++ + R N + +Y + R
Sbjct: 22 LIPNLPDDVALQCIARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSLLNCMQHSLYLIVR 81
Query: 85 DKFERICCYVLDPDSSRRSWKLIQGLPPRCLKRKGIGFEALGKKLLSVRWLWLVGRCY** 144
+ +VL+ + +++ LPP G F A+G K+
Sbjct: 82 VNCT-LKWFVLNQNP-----RILASLPPNPSPAIGSAFAAIGSKIF-------------- 121
Query: 145 SLLL*YF*QLMD*SCFLVYCKKLKNNFGIVKLPTPL--FRCYFACEVLDGRIYAIGG-LG 201
+L + + + C+ FG +L + R + A V+ +IY +GG L
Sbjct: 122 -VLGGSVNDVASPTVQVFDCR-----FGTWELGPRMRVGREFAAAGVVGRKIYVMGGCLV 175
Query: 202 SKLSDPHSW-DTFDPHKNSWESHSDGNVIPDVEDSIVLDGKIYIRCGASSVSSHVYAVLY 260
+ +W + FDP W VE + + K H AV
Sbjct: 176 DTWAKSANWAEVFDPAAGRWAG---------VESPVEVREKWM----------HASAV-- 214
Query: 261 EPSNGTWQHADADMVSGWRGPAVVVDGTLYVLD 293
P W ++ GWRG A VVDG LY D
Sbjct: 215 -PGTAEWGGVSTELDLGWRGRACVVDGVLYCYD 246
>GSVIVT01035518001 assembled CDS
Length = 322
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 4/174 (2%)
Query: 182 RCYFACEVLDGRIYAIGGLGSKLSDP-HSWDTFDPHKNSWESHSDGNVIPDVEDSIVLDG 240
R +FA ++G+I+A GG G + D + + +DP ++W + + D+ V+
Sbjct: 114 RTFFAAGSINGKIFAAGGRGLGVEDSIPTVERYDPVSDTWAAVAKMRSGLARYDAAVVGN 173
Query: 241 KIYIRCGAS-SVSSHVYAVLYEPSNGTWQHADADMVSGWRGPAVVVDGTLYVLDQSSGTR 299
K+Y+ G + S +Y+ TWQ M GW G +VV+ L+VL + R
Sbjct: 174 KLYVTEGWTWPFSFSPRGGVYDGDRDTWQEMSLGMREGWTGISVVLRNRLFVLSEYGDCR 233
Query: 300 LMMWQKDKRVW--VAVGRLSALLTRPPCRLVATGKRIFIIGKGLSTVVFDIDKT 351
+ ++ D W V GR + P + RI+++ +GL V + +T
Sbjct: 234 MKVYVPDHDTWHPVGGGRFPCEALQRPFAVSTMEDRIYVVSRGLHVAVGKVHET 287
>GSVIVT01008973001 assembled CDS
Length = 274
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 6 EHMEGGS------ERISQLEESQGP-LICGIPDDIALFCLARVPRKYHTVLKCVCRRWRD 58
EH EG +R+S + P LI +PD+I++ LAR+PR + L+ V R W+
Sbjct: 16 EHDEGSQHETCKRQRMSSSFNEENPRLIPSLPDEISILILARLPRICYFDLRLVSRNWKA 75
Query: 59 LVCNAEWHAYRGKHNLSETWIYALCRDKFERICCYVLDPDSSRRSWKLIQGLPPRCLKR 117
+ + E R + +E W+Y L + + +R+ + LDP S R W+ + +P L +
Sbjct: 76 TITSPELFNLRKELGKTEEWLYILTKVEEDRLLWHALDPLS--RRWQRLPSMPNDTLDQ 132