Jatropha Genome Database
- JcCA0141181.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0141181.10 + phase: 0 /partial
(458 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01035626001 assembled CDS 860 0.0
GSVIVT01024318001 assembled CDS 99 5e-21
GSVIVT01032103001 assembled CDS 76 4e-14
GSVIVT01029057001 assembled CDS 74 1e-13
GSVIVT01032110001 assembled CDS 72 5e-13
GSVIVT01038080001 assembled CDS 58 1e-08
GSVIVT01018217001 assembled CDS 57 2e-08
GSVIVT01021507001 assembled CDS 55 5e-08
GSVIVT01036862001 assembled CDS 52 6e-07
>GSVIVT01035626001 assembled CDS
Length = 563
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/457 (87%), Positives = 436/457 (95%)
Query: 2 GTYLRNGPGLWHIGDYKFRHLFDGYATLVKLHFENGRLMAGHRQVESEAYKAAKKNKKLC 61
GTYLRNGPGLWHIGDY FRHLFDGYATLV+LHF++GRL+AGHRQ++SEAYKAA KNKKLC
Sbjct: 107 GTYLRNGPGLWHIGDYNFRHLFDGYATLVRLHFQDGRLIAGHRQIQSEAYKAAIKNKKLC 166
Query: 62 YREFSEAPKPDNFLAYIGDLANLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIIIDP 121
YREFSE PK DNFL+Y+G+LA+LFSGASLTDNANTGVV+LGDGRVVCLTET KGSIIIDP
Sbjct: 167 YREFSEVPKADNFLSYVGELASLFSGASLTDNANTGVVRLGDGRVVCLTETIKGSIIIDP 226
Query: 122 DTLDTIGKFEFTDSLGGLIHSAHPIVTDTEFLTLLPDLIRPGYLVVRMAPGSNERKVIGR 181
DTL+T+GKFE++D+LGGLIHSAHPIVT++EF TLLPDL++PGY+VVRM PGSNERKVIGR
Sbjct: 227 DTLETMGKFEYSDTLGGLIHSAHPIVTESEFWTLLPDLVKPGYIVVRMEPGSNERKVIGR 286
Query: 182 VDCRGGPAPGWVHSFPVTEHYVIVPEMPLRYCAANLLKAEPTPLYKFEWHPDSKAFMHVM 241
V+CRGGPAPGWVHSFPVTEHYV+VPEM LRYCA NLL+AEPTPLYKFEWHP SKAFMHVM
Sbjct: 287 VNCRGGPAPGWVHSFPVTEHYVVVPEMSLRYCAQNLLRAEPTPLYKFEWHPLSKAFMHVM 346
Query: 242 CKASGKIVASVEVPLYVTFHFINAYEEKDEDGRVKAVIADCCEHSADTTILEKLRLQNLR 301
CKASGKIVASVEVPLYVTFHFINAYEEKDEDGRV ++ADCCEH+ADTTIL+KLRL NLR
Sbjct: 347 CKASGKIVASVEVPLYVTFHFINAYEEKDEDGRVTGIVADCCEHNADTTILDKLRLHNLR 406
Query: 302 SFGGVDVLPDARVGRFTIPLDGSPYGKLEAALDPDEHGRGMDMCSFNPSFLGKKYRYAYA 361
SF G DVLPDARVGRFTIPLDGSPYGKLEAAL+PDEHGRGMDMCS NP++LGK YRYAYA
Sbjct: 407 SFSGEDVLPDARVGRFTIPLDGSPYGKLEAALNPDEHGRGMDMCSINPAYLGKTYRYAYA 466
Query: 362 CGAQRPCNFPNTLTKIDLVKKKAKNWHDEGAVPSEPLFVTRPGATEEDDGVVISIISEKN 421
CGAQRPCNFPNTLTK+DLV+KKAKNW DEG+VPSEPLFV RPGATEEDDGVVIS++S+KN
Sbjct: 467 CGAQRPCNFPNTLTKLDLVEKKAKNWFDEGSVPSEPLFVARPGATEEDDGVVISMVSDKN 526
Query: 422 GDGYALLLDGSTFEEIARAKFPYGLPYGLHGCWVPKK 458
G+GYALLLDG TFEEIAR KFPYGLPYGLHGCWVPKK
Sbjct: 527 GEGYALLLDGRTFEEIARGKFPYGLPYGLHGCWVPKK 563
>GSVIVT01024318001 assembled CDS
Length = 562
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 196/469 (41%), Gaps = 69/469 (14%)
Query: 1 KGTYLRNGPGLWHIGDYKFRHLFDGYATLVKLHFENGRLMAGHRQVESEAYKAAKKNKKL 60
GTY+RNGP H HLF+G L + +GR R V++ YK A +
Sbjct: 140 NGTYIRNGPNPLH-QPRGPHHLFEGDGMLHSIRLSDGRATFCSRYVKT--YKYALE---- 192
Query: 61 CYREFSEAPKPDNFLAYIGDLANLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSII-- 118
DN I N+ SG ANT + L R+ L E+ I
Sbjct: 193 -----------DNVGFPI--FPNILSGFHSFGLANTS-LSLFSNRLFALGESDLPYSIHL 238
Query: 119 IDPDTLDTIGKFEFTDSLGGLIHSAHPIVTDTEFLTLLPDLIRPGYLVVRMAPGSNERKV 178
+ ++TIG+ +F D + +AHP + D E P + E
Sbjct: 239 SEEGDIETIGRCDF-DGKAFINMTAHPKI-DPETGETFAFRCSPIPPYITFFSIDKEGSK 296
Query: 179 IGRVDCRGGPAPGWVHSFPVTEHYVIVPEMPLRYCAANLLKAEPTPLYKFEWHPDSKAFM 238
V P +VH F +T+ Y++ E + L+ + P+ D +
Sbjct: 297 QQDVPIFSMTDPTFVHDFSITKQYIVFSESQIEMNPLRLMMCKGMPV---SAELDKVPRI 353
Query: 239 HVMCK--ASGKIVASVEVPLYVTFHFINAYEEKDEDGRVKAVIADCCE---HSADTT--I 291
V+ + ++ + E P + H INA+EE DE+ + A A E HS +
Sbjct: 354 GVLPRYASTDSEIRWFEAPGFNAMHAINAWEEGDEEIILVAPNAISIENLFHSIEKVHFS 413
Query: 292 LEKLRLQNLRSFGGVDVLPDARVGRFTIPLDGSPYGKLEAALDPDEHGRGMDMCSFNPSF 351
LEK+R+ NLRS V R T+ + +++ S NPS+
Sbjct: 414 LEKVRI-NLRS---------GSVTRTTL------------------SQKNLELGSINPSY 445
Query: 352 LGKKYRYAYACGAQRPCNFPNTLTKIDLVK--KKAKNWHDEGAVPSEPLFVTRPGATEED 409
+GK+ RY Y G + + + KIDL + ++ + G EPLFV + GA+EED
Sbjct: 446 VGKRNRYGY-MGIGKMIPKMSGVVKIDLELECEVSRRLYGAGCFGGEPLFVAKDGASEED 504
Query: 410 DGVVISII-SEKNGDGYALLLDG--STFEEIARAKFPYGLPYGLHGCWV 455
DG ++S + EK+G +++D T + +A K P +PYG HG +V
Sbjct: 505 DGYIVSYVHDEKSGASRFVVMDAKSQTLDVVAAVKLPRRVPYGFHGLFV 553
>GSVIVT01032103001 assembled CDS
Length = 546
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 196/507 (38%), Gaps = 100/507 (19%)
Query: 2 GTYLRNGPG--LWHIGDYKFRHLFDGYATLVKLHFENGRLMAGHRQVESEAYKAAKKNKK 59
G ++R GP + Y H FDG + LH ++G+ R V + +
Sbjct: 82 GEFVRVGPNPKFSPVAGY---HWFDGDGMIHGLHIKDGKATYVSRYV---------RTSR 129
Query: 60 LCYREFSEAPKPDNFLAYIGDLANLFSGASL-----------------TDNANTGVVKLG 102
L E+ K IGDL LF + T NT +V
Sbjct: 130 LKQEEYFGGAK----FMRIGDLKGLFGLLMVNMQMLRAKLKILDVSYGTGTGNTALV-YH 184
Query: 103 DGRVVCLTETQKGSI--IIDPDTLDTIGKFEFTDSLGGLIHS--AHPIVTDTEFLTLLPD 158
G+++ L+E K + +++ L T+G ++ L HS AHP V +
Sbjct: 185 HGKLLALSEADKPYVLKVLEDGDLQTLGMLDYDKRL---THSFTAHPKVD-----PFTGE 236
Query: 159 LIRPGYLVVRMAPGSNERKVIGRVDCRGGPAPGWV------HSFPVTEHYVIVPEMPLRY 212
+ GY P +VI + P P + H F +TE+Y I ++PL +
Sbjct: 237 MFSFGY---SHTPPYITYRVISKDGFMHEPVPITISDPIMMHDFAITENYAIFMDLPLYF 293
Query: 213 CAANLLKAEPTPLYKFEWHPDSKAFMHVMCK-ASGKI-VASVEVPLYVTFHFINAYEEKD 270
++K + F + KA V+ + A ++ + E+P FH NA+EE+D
Sbjct: 294 RPKEMVKEKKL---IFTFDATKKARFGVLPRYAKNELHIKWFELPNCFIFHNANAWEEED 350
Query: 271 EDGRVKAVIADCCEHSADTTILEKLRLQNLRSFGGVDVLPDARVGRFTIPLDGSPYGKLE 330
E V+ C + D ++ + L +FG + RF + + KL
Sbjct: 351 E-----VVLITCRLENPDLDLVGGDVKEKLENFGN-----ELYEMRFNMKTGIASQRKLS 400
Query: 331 AALDPDEHGRGMDMCSFNPSFLGKKYRYAYACGAQRPCNFPNTLTKIDL----------- 379
A+ +D N S+ G+K RY Y + K DL
Sbjct: 401 AS--------SVDFPRVNESYTGRKQRYVYGTILDSIAKV-TGIIKFDLHAEPDTGKSKL 451
Query: 380 -VKKKAKNWHDEGA--VPSEPLFVTR-PGAT-EEDDGVVISII-SEKNGDGYALLLDGST 433
V + D G SE +FV R PG T EEDDG +I I EK G Y ++D T
Sbjct: 452 EVGGNVQGIFDLGVGRFGSEAVFVPREPGITSEEDDGYLIFFIHDEKTGKSYVNVIDAKT 511
Query: 434 F--EEIARAKFPYGLPYGLHGCWVPKK 458
+ IA + P +PYG H +V ++
Sbjct: 512 MSPDPIAIVELPNRVPYGFHAFFVTEE 538
>GSVIVT01029057001 assembled CDS
Length = 554
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 110/469 (23%), Positives = 191/469 (40%), Gaps = 64/469 (13%)
Query: 1 KGTYLRNG--PGLWHIGDYKFRHLFDGYATLVKLHFENGRLMAGHRQVESEAYKAAKKNK 58
+G YLRNG P L G + HLFDG + + L G+R S + +
Sbjct: 125 RGVYLRNGANPMLSPAGGH---HLFDGDGMIHAV-----TLGPGNRASYSCRFTRTSRLV 176
Query: 59 KLCYREFSEAPKPDNFLAYIGDLANLFSGASLTDNANTGVVKLGDGRVVCLTETQ---KG 115
+ PKP IG L G+ T AN G+V +GR++ ++E
Sbjct: 177 QEAALGRPLFPKP------IG----LVDGSRGTGVANAGLVYF-NGRLLAMSEDDLPYHV 225
Query: 116 SIIIDPDTLDTIGKFEFTDSLGGLIHSAHPIV--TDTEFLTLLPDLIRPGYLVVRMAPGS 173
I D D L+T G+F+F+ + + AHP V E +L ++++ YL
Sbjct: 226 KIKGDGD-LETTGRFDFSGQMDRPM-IAHPKVDPITGELFSLSYNVVKKPYLKYYKFGTC 283
Query: 174 NERKVIGRVDCRGGPAPGWVHSFPVTEHYVIVPEMPLRYCAANLLKA------EPTPLYK 227
E+ + + P +H F +TE V++P+ + + + +++ +P + +
Sbjct: 284 GEKSREVSISLQ---QPTIIHDFALTETSVVIPDHQVVFKLSEMVRGGSPVIHDPNKISR 340
Query: 228 FEWHPDSKAFMHVMCKASGKIVASVEVPLYVTFHFINAYEEKDEDGRVKAVIADCCEHSA 287
F P + + ++VP FH NA++E+ G V+ C A
Sbjct: 341 FGVLPRNDP--------DESRIQWIDVPDCFCFHLWNAWDERSSSGDRIVVVIGSCMSPA 392
Query: 288 DTTILEKLRLQNLRSFGGVDVLPDARVGRFTIPLDGSPYGKLEAALDPDEHGRGMDMCSF 347
D+ E R+ LRS + R + GS + A G ++
Sbjct: 393 DSIFKE--RVDPLRS--------ELSEIRLNLTTGGSSRRVIVA-------GMNLEAGQV 435
Query: 348 NPSFLGKKYRYAYACGAQRPCNFPNTLTKIDLVKKKA-KNWHDEGAVPSEPLFVTRPGAT 406
+ LG++ RY Y A+ P + + K+DLV + K + EG E FV
Sbjct: 436 DKRRLGRRTRYIYLAIAE-PWPKCSGMAKVDLVTGEVTKMMYGEGRFGGEACFVGEEEGG 494
Query: 407 EEDDGVVISIISEKNGDGYALLLDGSTFEEIARAKFPYGLPYGLHGCWV 455
E + ++ + EK ++++ +++A + P +PYG HG +V
Sbjct: 495 EGEGWLMSIVRDEKRERSELIVVEADDIKQVASVRLPTRVPYGFHGTFV 543
>GSVIVT01032110001 assembled CDS
Length = 483
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 120/495 (24%), Positives = 193/495 (38%), Gaps = 97/495 (19%)
Query: 2 GTYLRNGPG--LWHIGDYKFRHLFDGYATLVKLHFENGRLMAGHRQVESEAYKAAKKNKK 59
G ++R GP + Y H FDG + L ++G+ R V + +
Sbjct: 40 GEFVRVGPNPKFSPVAGY---HWFDGDGMIHGLRIKDGKATYVSRYV---------RTSR 87
Query: 60 LCYREFSEAPKPDNFLAYIGDLANLFSGASL-----------------TDNANTGVVKLG 102
L E+ K F GDL LF + T NT +V
Sbjct: 88 LKQEEYFGGAKFTRF----GDLKGLFGLLMVNMQMLRAKLKILDVSYGTGTGNTALV-YH 142
Query: 103 DGRVVCLTETQKGSI--IIDPDTLDTIGKFEFTDSLGGLIHS--AHPIVTDTEFLTLLPD 158
G+++ L+E K + +++ L T+G ++ L HS AHP V +
Sbjct: 143 HGKLLALSEVDKPYVLKVLEDGDLQTLGLLDYDKRL---THSFTAHPKVD-----PFTGE 194
Query: 159 LIRPGYLVVRMAPGSNERKVIGRVDCRGGPAPGWV------HSFPVTEHYVIVPEMPLRY 212
+ GY P +VI + P P + H F +TE+Y I ++PL +
Sbjct: 195 MFTFGY---SHTPPYITYRVISKDGFMHEPVPITISDPIMMHDFAITENYAIFMDLPLYF 251
Query: 213 CAANLLKAEPTPLYKFEWHPDSKAFMHVMCK-ASGKI-VASVEVPLYVTFHFINAYEEKD 270
++K + F + KA V+ + A ++ + E+P FH NA+EE+D
Sbjct: 252 RPKEMVKEKKL---IFTFDATKKARFGVLPRYAKNELHIKWFELPNCFIFHNANAWEEED 308
Query: 271 EDGRVKAVIADCCEHSADTTILEKLRLQNLRSFGGVDVLPDARVGRFTIPLDGSPYGKLE 330
E V+ C + D ++ + + L +F + RF + + KL
Sbjct: 309 E-----VVLITCRLENPDLDLVGRNVKEKLENFAN-----ELYEMRFNMKTGIASQRKLS 358
Query: 331 AALDPDEHGRGMDMCSFNPSFLGKKYRYAYACGAQRPCNFPNTLTKIDLVKKKAKNWHDE 390
A+ +D N S+ G+K RY Y L I V + D
Sbjct: 359 AS--------SVDFPRVNESYTGRKQRYVYGT----------ILDSILEVGGNVQGIFDL 400
Query: 391 GA--VPSEPLFVTR-PGAT-EEDDGVVISII-SEKNGDGYALLLDGSTF--EEIARAKFP 443
G SE +FV R PG T EEDDG +I + EK G Y +++ T + +A + P
Sbjct: 401 GVGRFGSEAVFVPREPGITSEEDDGYLIFFVHDEKTGKSYVNVINAKTMSPDPVAIVELP 460
Query: 444 YGLPYGLHGCWVPKK 458
+PYG H +V ++
Sbjct: 461 NRVPYGFHAFFVTEE 475
>GSVIVT01038080001 assembled CDS
Length = 474
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 21/210 (10%)
Query: 252 VEVPLYVTFHFINAYEEKDEDGRVKAVIADCCEHSADTTILEKLRLQNLRSFGGVDVLPD 311
+E P FH NA+EE + D + V+ C D+ N G VL +
Sbjct: 277 IEAPDCFCFHLWNAWEEPETD---EVVVIGSCMTPPDSIF-------NECDEGLKSVLSE 326
Query: 312 ARVGRFTIPLDGSPYGKLEAALDPDEHGRGMDMCSFNPSFLGKKYRYAYACGAQRPCNFP 371
R+ T P + P+ ++ N + LG+K ++AY A+ P
Sbjct: 327 IRLNLKTGKSTRRP-------ILPESEQVNLEAGMVNRNRLGRKTQFAYLAVAE-PWPKV 378
Query: 372 NTLTKIDLVKKKAKNW-HDEGAVPSEPLFVTR-PGATEEDDGVVISII-SEKNGDGYALL 428
+ K+DL + + + E EPLF+ R P + EDDG +++ + EK +
Sbjct: 379 SGFAKVDLSTGQVSKYIYGEQRYGGEPLFLPRDPNSGREDDGYILAFVHDEKTWKSELQI 438
Query: 429 LDGSTFEEIARAKFPYGLPYGLHGCWVPKK 458
++ + + A K P +PYG HG ++ K
Sbjct: 439 VNATNLQLEASVKLPSRVPYGFHGTFISSK 468
>GSVIVT01018217001 assembled CDS
Length = 610
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 99/232 (42%), Gaps = 30/232 (12%)
Query: 252 VEVPLYV-TFHFINAYEEKDEDGRVKAVI-ADCCE------HSADTTILEKLRL----QN 299
+EVP + H NAYEE+DE G I A C H + +L N
Sbjct: 384 IEVPSQLWLIHVGNAYEERDERGNFNIQIHASACSYQWFNFHKMFGYDWQSRKLDPCVMN 443
Query: 300 LRSFGGVDVLPDARVGRFTIPLDGSPYGKLEAALDPDEHGRGMDMCSFNPSFLGKKYRYA 359
++ G + LP + + +I LD + K + ++ + D S NPS G K Y
Sbjct: 444 VQQ-GQEESLP--HLIQVSINLDANGTSKNCSVEPLNQWNKPSDFPSINPSSSGIKNTYM 500
Query: 360 YACGAQRP----CNFP-NTLTKIDLVKKKAKNWHD-EGAVPSEPLFVTRPGATEEDDGVV 413
YA A +FP +T+ K+++ K W EP+FV P EEDDG +
Sbjct: 501 YAAAASGSRSTLPHFPFDTIVKVNVPNKSTHRWSTGTRRFIGEPIFV--PKGIEEDDGYL 558
Query: 414 ISI-ISEKNGDGYALLLDGSTFEEI----ARAKFPYGL--PYGLHGCWVPKK 458
+ + + Y ++LD EI AR + P L P G HG W PK+
Sbjct: 559 LVVEYAVSIQRCYLVILDAKRIGEIDALVARLEVPKHLTFPIGFHGFWAPKE 610
>GSVIVT01021507001 assembled CDS
Length = 473
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 23/208 (11%)
Query: 252 VEVPLYVTFHFINAYEEKDEDGRVKAVIADCCEHSADTTILE-KLRLQNLRSFGGVDVLP 310
VE P FH NA+EE + + + V+ C AD+ E + LQ++ S +++
Sbjct: 276 VESPDTFCFHLWNAWEEPETN---EVVVIGSCMTPADSIFNECEENLQSVLSEIRLNLKT 332
Query: 311 DARVGRFTIPLDGSPYGKLEAALDPDEHGRGMDMCSFNPSFLGKKYRYAYACGAQRPCNF 370
R +P S LEA + N + LG+K +YAY A+ P
Sbjct: 333 GESTRRPIVP--ASEQVNLEAGM-------------VNRTRLGRKTQYAYLAIAE-PWPK 376
Query: 371 PNTLTKIDLVKKKAKNW-HDEGAVPSEPLFVTR-PGATEEDDGVVISII-SEKNGDGYAL 427
+ K+DL + + + + EP FV + P + EDDG +++ + EK
Sbjct: 377 VSGFAKVDLSTGDVQKYQYGDQRYGGEPYFVHKDPTSEREDDGYILAFVHDEKTWKSELH 436
Query: 428 LLDGSTFEEIARAKFPYGLPYGLHGCWV 455
+++ + A K P +PYG HG +V
Sbjct: 437 IVNAMNLQLEATVKLPSRVPYGFHGTFV 464
>GSVIVT01036862001 assembled CDS
Length = 915
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 24/122 (19%)
Query: 340 RGMDMCSFNPSFLGKKYRYAYACGAQRPCNFPNTLTKIDLVKKKAKNWHDEGAVPSEPLF 399
R +D NP ++GKK +Y YA N + KI V K P P
Sbjct: 807 RNLDFAVINPGYVGKKNKYVYAAVG-------NPMPKISGVVKL-------DVEPDNP-- 850
Query: 400 VTRPGATEEDDGVVISII-SEKNGDGYALLLDGST--FEEIARAKFPYGLPYGLHGCWVP 456
EEDDG ++S + EK+G+ L++D T + +A + P +PYG HG
Sbjct: 851 -----EAEEDDGYIVSYVHDEKSGESKFLVMDAKTPNLDIVAAVRLPRRVPYGFHGLLYS 905
Query: 457 KK 458
KK
Sbjct: 906 KK 907