Jatropha Genome Database

JcCA0136101.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0136101.20 - phase: 2 /partial
         (440 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01033905001 assembled CDS                                       470   e-133
GSVIVT01037646001 assembled CDS                                       169   2e-42
GSVIVT01012735001 assembled CDS                                       169   2e-42
GSVIVT01027031001 assembled CDS                                       141   5e-34
GSVIVT01019462001 assembled CDS                                       140   1e-33
GSVIVT01036076001 assembled CDS                                       139   3e-33
GSVIVT01019666001 assembled CDS                                        88   7e-18

>GSVIVT01033905001 assembled CDS
          Length = 583

 Score =  470 bits (1210), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 249/399 (62%), Positives = 296/399 (74%), Gaps = 48/399 (12%)

Query: 4   KNYLKLINRVWGNEDRPSSSMSLISALHAELERARLQVNHLIQEQRSDQNELNYLMKCFA 63
           K  LK+I+R+WG+ED+PSSSMSLISALHAELERARL +N LIQEQRSDQ+E+NYLMKCFA
Sbjct: 218 KELLKIISRIWGHEDQPSSSMSLISALHAELERARLHINQLIQEQRSDQSEINYLMKCFA 277

Query: 64  EEKAAWKNKEQKVVAAAIESIAGELEVEKKLRRRLESLNKKLGKELAETKSSLLKAVKEL 123
           EEKAAWK+KEQ+V+ AAIESIAGELEVE+KLRRR ESLNKKLG+ELAETK+SL+KAVKEL
Sbjct: 278 EEKAAWKSKEQQVIEAAIESIAGELEVERKLRRRFESLNKKLGRELAETKTSLIKAVKEL 337

Query: 124 ENEKRARVVMEQVCDELARDIGEDKAEVEELKRESVKLCAEVEKEREMLQLADVLREERV 183
           E EKRAR +MEQVCDEL +D+GEDK EVEE+KRES K+  E EKERE+LQLADVLREER 
Sbjct: 338 ECEKRAREIMEQVCDELTQDVGEDKDEVEEIKRESAKVREEAEKEREILQLADVLREERA 397

Query: 184 QMKLSEAKYQLEEKNAAVDKLRSQLEAFLGTKRSKEKGRSSY-HMNDEDIVAYLNKSRPV 242
           Q K+SEAKYQ EEKNA V+KL+++LE F+ +K++KEKGR S  H N +D +         
Sbjct: 398 QSKISEAKYQFEEKNAVVEKLKNELEVFMRSKKAKEKGRGSLKHDNFKDAL--------- 448

Query: 243 AHQNEVNXXXXXXXXXXXXXXXXSGESDLHSIELNMDNNNKSYKWTYPSGTPRDLRKAAI 302
                                  S ESDLHSIELNMDNNNKSYKWT              
Sbjct: 449 ------------------DCEEDSAESDLHSIELNMDNNNKSYKWTSS------------ 478

Query: 303 DEEETKGRKSTSSKVPRRSTSLQRSISDGVEWSAQNERLSVTGDGIDWGGLSELERHLQG 362
                   +STS K+ RRSTSLQRS+SDG++W  Q+E L  + DG+DWG   ELE+  QG
Sbjct: 479 --------RSTSGKMSRRSTSLQRSMSDGIDWGIQSENLQSSRDGLDWGRFYELEKEAQG 530

Query: 363 KGYGDEMLGHQSVKGLRDYLLSGSRVDSARGYASPTRQV 401
           KGYGDEM  ++SVKGLRD +L+GSR+ SARG    +R V
Sbjct: 531 KGYGDEMQRYKSVKGLRDQILAGSRIGSARGSGLKSRLV 569


>GSVIVT01037646001 assembled CDS
          Length = 673

 Score =  169 bits (428), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/198 (46%), Positives = 145/198 (73%)

Query: 18  DRPSSSMSLISALHAELERARLQVNHLIQEQRSDQNELNYLMKCFAEEKAAWKNKEQKVV 77
           D+  S++S++SAL AEL +AR +++ L  E+RS + +L + +K  +EE+A+W+ +E + +
Sbjct: 233 DQQVSAVSVVSALEAELAQARARIDELEAERRSSKKKLEHFLKKVSEERASWRRREHEKI 292

Query: 78  AAAIESIAGELEVEKKLRRRLESLNKKLGKELAETKSSLLKAVKELENEKRARVVMEQVC 137
            A I+ +  +L  E+K R+R+E +N KL  EL++ K S  + +++ E E++ R V+E+VC
Sbjct: 293 RAIIDDVKTDLNRERKNRQRIELINSKLVNELSDVKLSAKRFMQDYEKERKDREVLEEVC 352

Query: 138 DELARDIGEDKAEVEELKRESVKLCAEVEKEREMLQLADVLREERVQMKLSEAKYQLEEK 197
           DELA++IG+DKAE E LKRES+KL  E+E+ER+MLQ+A+V REERVQMKL  AK  LEEK
Sbjct: 353 DELAKEIGDDKAEAESLKRESMKLRDEMEEERKMLQMAEVWREERVQMKLVAAKVALEEK 412

Query: 198 NAAVDKLRSQLEAFLGTK 215
            A ++K+ + + AFL +K
Sbjct: 413 YAQMNKVMADIAAFLRSK 430


>GSVIVT01012735001 assembled CDS
          Length = 688

 Score =  169 bits (428), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 91/200 (45%), Positives = 143/200 (71%)

Query: 16  NEDRPSSSMSLISALHAELERARLQVNHLIQEQRSDQNELNYLMKCFAEEKAAWKNKEQK 75
           +ED   S++S++S L AEL +AR +++ L  E+ S + +L + +K   E++ +W+++EQ+
Sbjct: 291 HEDGQLSTVSVVSTLQAELLQARTRIHELEAERHSFKKKLEHFLKKVNEDRTSWQSREQQ 350

Query: 76  VVAAAIESIAGELEVEKKLRRRLESLNKKLGKELAETKSSLLKAVKELENEKRARVVMEQ 135
            +   I+ +  +L +E+K R+R+E LN KL  ELA+ K S+ + ++E E E++ R +ME+
Sbjct: 351 KIRGIIDDLKDKLNIERKNRQRMEILNSKLVNELADAKLSMKEFMQEYEKERKGRELMEE 410

Query: 136 VCDELARDIGEDKAEVEELKRESVKLCAEVEKEREMLQLADVLREERVQMKLSEAKYQLE 195
           VC+ELA++IGEDKAEVE  KRE VK+  EVE+ER+MLQ+A+V REERVQMKL +AK  LE
Sbjct: 411 VCNELAKEIGEDKAEVESFKREYVKIREEVEEERKMLQMAEVWREERVQMKLVDAKLTLE 470

Query: 196 EKNAAVDKLRSQLEAFLGTK 215
            K   ++KL + LE FL ++
Sbjct: 471 NKYCQMNKLVADLETFLSSR 490


>GSVIVT01027031001 assembled CDS
          Length = 425

 Score =  141 bits (356), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 136/212 (64%), Gaps = 22/212 (10%)

Query: 7   LKLINRVWGNEDRPSSSMSLISALHAELERARLQVNHLIQEQRSDQNELNYLMKCFAEEK 66
           LK++NR+W  E++ +S++SL+ AL  EL+ +R ++  L+QE+++++ E++ LMK      
Sbjct: 61  LKVLNRIWSLEEQHASTISLVKALKMELDHSRARIKELLQEKQTERQEMDDLMK------ 114

Query: 67  AAWKNKEQKVVAAAIESIAGELEVEKKLRRRLESLNKKLGKELAETKSSLLKAVKELENE 126
                          +S+  ELE E+KLR+R E+L++KL +EL+E KSS   A++ELE E
Sbjct: 115 ---------------QSVRDELEDERKLRKRSETLHRKLARELSEVKSSFSNALRELERE 159

Query: 127 KRARVVMEQVCDELARDIGEDKAEVEELKRESVK-LCAEVEKEREMLQLADVLREERVQM 185
           K+AR+++E +CDE A+ I E + EV  LK +  K   A    +R +L +++   +ER+QM
Sbjct: 160 KKARILLEDLCDEFAKGIREYEQEVRSLKHKPEKDRVARENSDRLVLHISEAWLDERMQM 219

Query: 186 KLSEAKYQLEEKNAAVDKLRSQLEAFLGTKRS 217
           KL+EA+  + EKN  VDKL  ++E FL  K+S
Sbjct: 220 KLAEARCDVAEKNTIVDKLSFEIETFLRAKQS 251


>GSVIVT01019462001 assembled CDS
          Length = 650

 Score =  140 bits (352), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/213 (38%), Positives = 140/213 (65%), Gaps = 1/213 (0%)

Query: 5   NYLKLINRVWGNEDRPSSSMSLISALHAELERARLQVNHLIQEQRSDQNELNYLMKCFAE 64
           + LK++NR+W  E++ +S++SLI AL  EL  AR ++  L+++Q+++++E++ LMK   +
Sbjct: 121 DLLKVLNRIWSLEEQHASNVSLIKALKMELGHARARIKRLLRDQQAERHEIDDLMKQVED 180

Query: 65  EKAAWKNKEQKVVAAAIESIAGELEVEKKLRRRLESLNKKLGKELAETKSSLLKAVKELE 124
           +     +KEQ  V +A++S+  ELE E+KLR+  ESL++KL +EL+E KSS   A+KELE
Sbjct: 181 KLLRKSSKEQDRVNSAVQSVRDELENERKLRKHSESLHRKLARELSEVKSSFSNALKELE 240

Query: 125 NEKRARVVMEQVCDELARDIGEDKAEVEELKRES-VKLCAEVEKEREMLQLADVLREERV 183
            E+++R ++E +CDE A+ I + + EV  LK++S        + +R +L L++   +ER+
Sbjct: 241 KERKSRELLEDLCDEFAKGIRDYQQEVHALKQKSDSDWAGRADHDRLILHLSESWLDERM 300

Query: 184 QMKLSEAKYQLEEKNAAVDKLRSQLEAFLGTKR 216
           Q KL E +    E N  +DKL  ++E FL  K+
Sbjct: 301 QTKLVETQLGSAENNPILDKLSFEIETFLQAKQ 333


>GSVIVT01036076001 assembled CDS
          Length = 503

 Score =  139 bits (349), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 79/150 (52%), Positives = 105/150 (70%), Gaps = 22/150 (14%)

Query: 4   KNYLKLINRVWGNEDRPSSSMSLISALHAELERARLQVNHLIQEQRSDQNELNYLMKCFA 63
           K  LK++NR+WG E++ SSS+ ++SAL  EL+RAR QV+ LI+EQ               
Sbjct: 208 KELLKVLNRIWGLEEKNSSSIPVVSALRLELDRARTQVDQLIREQ--------------- 252

Query: 64  EEKAAWKNKEQKVVAAAIESIAGELEVEKKLRRRLESLNKKLGKELAETKSSLLKAVKEL 123
                  +KE+  +  AI SIAGEL+VEKKLRR+ E LNKKLG+EL   K+SL KA+KEL
Sbjct: 253 -------SKERARIREAIASIAGELDVEKKLRRQTERLNKKLGEELGHIKASLSKALKEL 305

Query: 124 ENEKRARVVMEQVCDELARDIGEDKAEVEE 153
           ++EKRAR ++EQ+CDELA+ IGED+AE EE
Sbjct: 306 KSEKRAREILEQMCDELAQGIGEDRAEKEE 335



 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 91/167 (54%), Gaps = 39/167 (23%)

Query: 266 SGESDLHSIELNMDNNNKSYKWTYPSGTPR--DLRKAAIDEEETKGRKSTSSKVPRRSTS 323
           S ESDLHSIELNMDN++KSY W+Y  GT    D  + ++D  E +GRK TS K       
Sbjct: 351 SAESDLHSIELNMDNSSKSYMWSYACGTEAQDDSNRVSVD-REIRGRKPTSGK------- 402

Query: 324 LQRSISDGVEWSAQNERLSVTGDGIDWGGLSELER---HLQGKGYGDEMLGHQSVKGLRD 380
                                   I WG +S LER   + + K Y DE+  ++SVKGLRD
Sbjct: 403 ------------------------IQWGNIS-LERVTSNARRKDYEDEIKRYKSVKGLRD 437

Query: 381 YLLSGSRVDSARGYASPTRQVGQ-RPSRDSNNAIQDRPPTAPGNASK 426
           ++LSGS+V S +G+ASPTR+  Q  P +D ++ + +      G+ S+
Sbjct: 438 HILSGSKVSSIQGFASPTRKWEQASPLQDCSSVVLESLAVVQGSGSR 484


>GSVIVT01019666001 assembled CDS
          Length = 200

 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 52/117 (44%), Positives = 77/117 (65%), Gaps = 21/117 (17%)

Query: 76  VVAAAIESIAGELEVEKKLRRRLESLNKKLGKELAETKSSLLKAVKELENEKRARVVMEQ 135
           +  A I  +  ELE E+K R+++ES+NK+L K+L E              E+R R  ME+
Sbjct: 7   IARAQIIELKAELEFERKARKKVESMNKRLAKDLNE--------------ERRGREAMER 52

Query: 136 VCDELARDIGEDKAEVEELKRESVKLCAEVEKEREMLQLADVLREERVQMKLSEAKY 192
           VC+ LA++I  DKAE+  +KRE       +E+ER+ML++A+VLREERVQMKL++AK+
Sbjct: 53  VCEVLAKEISSDKAEISWMKRE-------IEEERKMLRMAEVLREERVQMKLADAKF 102