Jatropha Genome Database
- JcCA0136101.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0136101.10 + phase: 1 /pseudo/partial
(243 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01011519001 assembled CDS 186 8e-48
GSVIVT01022714001 assembled CDS 183 6e-47
GSVIVT01022699001 assembled CDS 183 8e-47
GSVIVT01022705001 assembled CDS 182 8e-47
GSVIVT01022712001 assembled CDS 181 3e-46
GSVIVT01022702001 assembled CDS 181 4e-46
GSVIVT01022723001 assembled CDS 180 6e-46
GSVIVT01022715001 assembled CDS 180 7e-46
GSVIVT01022690001 assembled CDS 177 5e-45
GSVIVT01036075001 assembled CDS 132 2e-31
GSVIVT01022720001 assembled CDS 98 3e-21
GSVIVT01036073001 assembled CDS 77 7e-15
GSVIVT01022721001 assembled CDS 63 1e-10
>GSVIVT01011519001 assembled CDS
Length = 328
Score = 186 bits (472), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 124/201 (61%), Gaps = 6/201 (2%)
Query: 19 QLMCLMGVVERAGCYLFSTVLFFDSLGQRLGQQRKLMPVASESAVWYSGQKSSLPVYETS 78
++ + GV+ER G L+ TVLFFD G LG+ RKLMP E VW G S+ PVY+T
Sbjct: 94 KVYIVTGVIERDGYTLYCTVLFFDPEGNYLGKHRKLMPTYRERLVWGFGDCSTTPVYDTP 153
Query: 79 IGKIGGLVCWDNKSPLLRTELYAKGVEIYCAPSADSREIWKSSMIHIAVEGGCFVLSASQ 138
GK+G ++CW+N+ PLLRT +Y KG+EIYCAPSADS + W ++M H+A+EGGC+VLS Q
Sbjct: 154 YGKLGSVICWENRMPLLRTAMYGKGIEIYCAPSADSGDTWVATMRHVAMEGGCYVLSPIQ 213
Query: 139 LCRR-DYPLS----FGDSNSDKSLDXXXXXXXXXXXXXXXXXLAGPNYQKECLISADLDL 193
CRR DYP + + D + D LAGPNY+ E L +ADLD+
Sbjct: 214 FCRRKDYPPPPEYLYSPTEEDVTPDSIVWAGGSVIISPTGEVLAGPNYEGEGLFTADLDV 273
Query: 194 -SEINRAKTEFGAIGNNLKPD 213
EI +AK F +G+ +PD
Sbjct: 274 RGEIPKAKFMFDVVGHYSRPD 294
>GSVIVT01022714001 assembled CDS
Length = 329
Score = 183 bits (465), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 124/201 (61%), Gaps = 6/201 (2%)
Query: 19 QLMCLMGVVERAGCYLFSTVLFFDSLGQRLGQQRKLMPVASESAVWYSGQKSSLPVYETS 78
++ + GV+ER G L+ TVLFFD G LG+ RKLMP E VW G S+ PVY+T
Sbjct: 94 RVYLVTGVIEREGYTLYCTVLFFDPKGNYLGKHRKLMPTYWERLVWGFGDCSTTPVYDTP 153
Query: 79 IGKIGGLVCWDNKSPLLRTELYAKGVEIYCAPSADSREIWKSSMIHIAVEGGCFVLSASQ 138
GK+G ++CW+N+ PLLRT +Y KG+EIYCAP+ADS + W ++M H+A+EGGC+VLS Q
Sbjct: 154 YGKLGSVICWENRMPLLRTAMYGKGIEIYCAPTADSGDTWVATMRHVAIEGGCYVLSPIQ 213
Query: 139 LCRR-DYPLS----FGDSNSDKSLDXXXXXXXXXXXXXXXXXLAGPNYQKECLISADLDL 193
CRR DYP + + D + D LAGPNY+ E L +ADLD+
Sbjct: 214 FCRRKDYPPPPEYLYSPTEEDVTPDSIVWAGGSVIISPHGEILAGPNYEGEGLFTADLDV 273
Query: 194 -SEINRAKTEFGAIGNNLKPD 213
EI +AK +F +G+ + D
Sbjct: 274 RGEIPKAKFQFDVVGHYSRAD 294
>GSVIVT01022699001 assembled CDS
Length = 313
Score = 183 bits (464), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 123/201 (61%), Gaps = 6/201 (2%)
Query: 19 QLMCLMGVVERAGCYLFSTVLFFDSLGQRLGQQRKLMPVASESAVWYSGQKSSLPVYETS 78
++ + GVVER G L+STVLFFD G LG+ RKLMP E W G S+ PVY+T
Sbjct: 94 KVYLVTGVVERDGYTLYSTVLFFDPEGNYLGKHRKLMPTYWERLFWGFGDCSTTPVYDTP 153
Query: 79 IGKIGGLVCWDNKSPLLRTELYAKGVEIYCAPSADSREIWKSSMIHIAVEGGCFVLSASQ 138
GK+G ++CW+N+ PL RT +Y KG+EIYCAP+ADS + W ++M H+A+EGGC+VLS Q
Sbjct: 154 YGKLGSVICWENRMPLFRTAMYGKGIEIYCAPTADSGDTWVATMRHVAIEGGCYVLSPIQ 213
Query: 139 LCRR-DYPLS----FGDSNSDKSLDXXXXXXXXXXXXXXXXXLAGPNYQKECLISADLDL 193
CRR DYP + + D + D LAGPNY+ E L +ADLD+
Sbjct: 214 FCRRKDYPPPPEYLYSPTEEDVTPDSIVWAGGSVIISPHGEILAGPNYEGEGLFTADLDV 273
Query: 194 -SEINRAKTEFGAIGNNLKPD 213
EI +AK +F +G+ + D
Sbjct: 274 RGEIPKAKFQFDVVGHYSRAD 294
>GSVIVT01022705001 assembled CDS
Length = 334
Score = 182 bits (463), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 125/201 (62%), Gaps = 6/201 (2%)
Query: 19 QLMCLMGVVERAGCYLFSTVLFFDSLGQRLGQQRKLMPVASESAVWYSGQKSSLPVYETS 78
++ ++GV+ER G L+ TVLFFD G LG+ RKLMP E VW G S+ PVY+T
Sbjct: 94 KVYLVIGVIERDGYTLYCTVLFFDPEGNYLGKHRKLMPTYWERLVWGFGDCSTTPVYDTP 153
Query: 79 IGKIGGLVCWDNKSPLLRTELYAKGVEIYCAPSADSREIWKSSMIHIAVEGGCFVLSASQ 138
GK+G ++CW+N+ PLLRT +Y KG+EIYCAP+ADS + W ++M HIA+EGGC+VLS Q
Sbjct: 154 YGKLGSVICWENRMPLLRTAMYGKGIEIYCAPTADSGDTWVATMRHIAMEGGCYVLSPIQ 213
Query: 139 LCRR-DYPLS----FGDSNSDKSLDXXXXXXXXXXXXXXXXXLAGPNYQKECLISADLDL 193
CRR DYP + + D + D LAGPNY+ E L +ADLD+
Sbjct: 214 FCRRKDYPPPPEYLYSPTEEDVTPDSIVWAGGSVIISPHGEILAGPNYEGEGLFTADLDV 273
Query: 194 -SEINRAKTEFGAIGNNLKPD 213
EI +AK +F +G+ + D
Sbjct: 274 RGEIPKAKFQFDVVGHYSRAD 294
>GSVIVT01022712001 assembled CDS
Length = 352
Score = 181 bits (458), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 122/201 (60%), Gaps = 6/201 (2%)
Query: 19 QLMCLMGVVERAGCYLFSTVLFFDSLGQRLGQQRKLMPVASESAVWYSGQKSSLPVYETS 78
++ + GVVER G L+ TVLFFD G LG+ RKLMP E W G S+ PVY+T
Sbjct: 94 KVYLVTGVVERDGYTLYCTVLFFDPEGNYLGKHRKLMPTYWERLFWGFGDCSTTPVYDTP 153
Query: 79 IGKIGGLVCWDNKSPLLRTELYAKGVEIYCAPSADSREIWKSSMIHIAVEGGCFVLSASQ 138
GK+G ++CW+N+ PL RT +Y KG+EIYCAP+ADS + W ++M H+A+EGGC+VLS Q
Sbjct: 154 YGKLGSVICWENRMPLFRTSMYGKGIEIYCAPTADSGDTWVATMRHVAIEGGCYVLSPIQ 213
Query: 139 LCRR-DYPLS----FGDSNSDKSLDXXXXXXXXXXXXXXXXXLAGPNYQKECLISADLDL 193
CRR DYP + + D + D LAGPNY+ E L +ADLD+
Sbjct: 214 FCRRKDYPPPPEYLYSPTEEDVTPDSIVWAGGSVIISPHGEILAGPNYEGEGLFTADLDV 273
Query: 194 -SEINRAKTEFGAIGNNLKPD 213
EI +AK +F +G+ + D
Sbjct: 274 RGEIPKAKFQFDVVGHYSRAD 294
>GSVIVT01022702001 assembled CDS
Length = 329
Score = 181 bits (458), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 122/201 (60%), Gaps = 6/201 (2%)
Query: 19 QLMCLMGVVERAGCYLFSTVLFFDSLGQRLGQQRKLMPVASESAVWYSGQKSSLPVYETS 78
++ + GVVER G L+ TVLFFD G LG+ RKLMP E W G S+ PVY+T
Sbjct: 94 KVYLVTGVVERDGYTLYCTVLFFDPEGNYLGKHRKLMPTYWERLFWGFGDCSTTPVYDTP 153
Query: 79 IGKIGGLVCWDNKSPLLRTELYAKGVEIYCAPSADSREIWKSSMIHIAVEGGCFVLSASQ 138
GK+G ++CW+N+ PL RT +Y KG+EIYCAP+ADS + W ++M H+A+EGGC+VLS Q
Sbjct: 154 YGKLGSVICWENRMPLFRTAMYGKGIEIYCAPTADSGDTWVATMRHVAIEGGCYVLSPIQ 213
Query: 139 LCRR-DYPLS----FGDSNSDKSLDXXXXXXXXXXXXXXXXXLAGPNYQKECLISADLDL 193
CRR DYP + + D + D LAGPNY+ E L +ADLD+
Sbjct: 214 FCRRKDYPPPPEYLYSPTEEDVTPDSIVWAGGSVIISPHGEILAGPNYEGEGLFTADLDV 273
Query: 194 -SEINRAKTEFGAIGNNLKPD 213
EI +AK +F +G+ + D
Sbjct: 274 RGEIPKAKFQFDVVGHYSRAD 294
>GSVIVT01022723001 assembled CDS
Length = 329
Score = 180 bits (456), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 122/201 (60%), Gaps = 6/201 (2%)
Query: 19 QLMCLMGVVERAGCYLFSTVLFFDSLGQRLGQQRKLMPVASESAVWYSGQKSSLPVYETS 78
++ + GVVER G L+ TVLFFD G LG+ RKLMP E W G S+ P+Y+T
Sbjct: 94 KVYLVTGVVERDGYTLYCTVLFFDPEGNYLGKHRKLMPTYWERLFWGFGDCSTTPIYDTP 153
Query: 79 IGKIGGLVCWDNKSPLLRTELYAKGVEIYCAPSADSREIWKSSMIHIAVEGGCFVLSASQ 138
GK+G ++CW+N+ PL RT +Y KG+EIYCAP+ADS + W ++M HIA+EGGC+VLS Q
Sbjct: 154 YGKLGSVICWENRMPLFRTSMYGKGIEIYCAPTADSGDKWVATMRHIAIEGGCYVLSPIQ 213
Query: 139 LCRR-DYPLS----FGDSNSDKSLDXXXXXXXXXXXXXXXXXLAGPNYQKECLISADLDL 193
CRR DYP + + D + D LAGPNY+ E L +ADLD+
Sbjct: 214 FCRRKDYPPPPEYLYSPTEEDVTPDSIVWAGGSVIISPHGEILAGPNYEGEGLFTADLDV 273
Query: 194 -SEINRAKTEFGAIGNNLKPD 213
EI +AK +F +G+ + D
Sbjct: 274 RGEIPKAKFQFDVVGHYSRAD 294
>GSVIVT01022715001 assembled CDS
Length = 329
Score = 180 bits (456), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 122/201 (60%), Gaps = 6/201 (2%)
Query: 19 QLMCLMGVVERAGCYLFSTVLFFDSLGQRLGQQRKLMPVASESAVWYSGQKSSLPVYETS 78
++ + GVVER G L+ TVLFFD G LG+ RKLMP E W G S+ P+Y+T
Sbjct: 94 KVYLVTGVVERDGYTLYCTVLFFDPEGNYLGKHRKLMPTYWERLFWGFGDCSTTPIYDTP 153
Query: 79 IGKIGGLVCWDNKSPLLRTELYAKGVEIYCAPSADSREIWKSSMIHIAVEGGCFVLSASQ 138
GK+G ++CW+N+ PL RT +Y KG+EIYCAP+ADS + W ++M HIA+EGGC+VLS Q
Sbjct: 154 YGKLGSVICWENRMPLFRTSMYGKGIEIYCAPTADSGDKWVATMRHIAIEGGCYVLSPIQ 213
Query: 139 LCRR-DYPLS----FGDSNSDKSLDXXXXXXXXXXXXXXXXXLAGPNYQKECLISADLDL 193
CRR DYP + + D + D LAGPNY+ E L +ADLD+
Sbjct: 214 FCRRKDYPPPPEYLYSPTEEDVTPDSIVWAGGSVIISPHGEILAGPNYEGEGLFTADLDV 273
Query: 194 -SEINRAKTEFGAIGNNLKPD 213
EI +AK +F +G+ + D
Sbjct: 274 RGEIPKAKFQFDVVGHYSRAD 294
>GSVIVT01022690001 assembled CDS
Length = 326
Score = 177 bits (448), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 122/201 (60%), Gaps = 6/201 (2%)
Query: 19 QLMCLMGVVERAGCYLFSTVLFFDSLGQRLGQQRKLMPVASESAVWYSGQKSSLPVYETS 78
++ + GVV R G L+ TVLFFD G LG+ RKL+P E W S+ PVY+T
Sbjct: 91 KVYLVTGVVVRDGYTLYCTVLFFDPEGNYLGKHRKLVPTYWERLFWGFADCSTTPVYDTP 150
Query: 79 IGKIGGLVCWDNKSPLLRTELYAKGVEIYCAPSADSREIWKSSMIHIAVEGGCFVLSASQ 138
GK+G ++CW+N+ PL RT +Y KG+EIYCAP+ADSR+ W ++M H+A+EGGC+VLS Q
Sbjct: 151 YGKLGSVICWENRMPLFRTAMYGKGIEIYCAPTADSRDTWVATMRHVAIEGGCYVLSPIQ 210
Query: 139 LCRR-DYPLS----FGDSNSDKSLDXXXXXXXXXXXXXXXXXLAGPNYQKECLISADLDL 193
CRR DYP + + D + D L GPNY+ E L +ADLD+
Sbjct: 211 FCRRKDYPPPPEYLYSPTEEDVTPDSIVWVGGSVIISPHGKILPGPNYEGEGLFTADLDV 270
Query: 194 -SEINRAKTEFGAIGNNLKPD 213
+EI +AK +F A+G+ + D
Sbjct: 271 RNEIPKAKFQFDAVGHYSRAD 291
>GSVIVT01036075001 assembled CDS
Length = 154
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 93/152 (61%), Gaps = 11/152 (7%)
Query: 93 PLLRTELYAKGVEIYCAPSADSREIWKSSMIHIAVEGGCFVLSASQLCRR-DYP----LS 147
PLLRT +YAKG+EIYCAP+AD+R+IW+SSM HIA+EGGCFVLSA+Q CRR DYP
Sbjct: 2 PLLRTAMYAKGIEIYCAPTADARDIWQSSMTHIALEGGCFVLSANQFCRRKDYPPPPEYE 61
Query: 148 FGDSNSDKSLDXXXXXXXXXXXXXXXXXLAGPNYQKECLISADLDLSEINRAKTEFGAIG 207
F ++ D + D LAGPNY E LISADLDL EI RAK +F +G
Sbjct: 62 FSGAD-DLTPDSVVCAGGSVIISPSGTVLAGPNYDGEALISADLDLGEIARAKFDFDVVG 120
Query: 208 NNLKPDHVGWCASELNP----ILLATDIKIED 235
+ +P+ + + NP + +K ED
Sbjct: 121 HYSRPEVLSLVVKD-NPTKPVTFTSASVKTED 151
>GSVIVT01022720001 assembled CDS
Length = 156
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 71/121 (58%), Gaps = 6/121 (4%)
Query: 99 LYAKGVEIYCAPSADSREIWKSSMIHIAVEGGCFVLSASQLCRR-DYPLS----FGDSNS 153
+Y KG+EIYCAP+ADS + W ++M HIA+EGGC+VLS Q CRR DYP + +
Sbjct: 1 MYGKGIEIYCAPTADSGDTWVATMRHIAMEGGCYVLSPIQFCRRKDYPPPPEYLYSPTEE 60
Query: 154 DKSLDXXXXXXXXXXXXXXXXXLAGPNYQKECLISADLDL-SEINRAKTEFGAIGNNLKP 212
D + D LAGPNY+ E L +ADLD+ EI +AK +F +G+ +
Sbjct: 61 DVTPDSIVWAGGSVIISPHGEILAGPNYEGEGLFTADLDVRGEIPKAKFQFDVVGHYSRA 120
Query: 213 D 213
D
Sbjct: 121 D 121
>GSVIVT01036073001 assembled CDS
Length = 110
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Query: 122 MIHIAVEGGCFVLSASQLC-RRDYPLS----FGDSNSDKSLDXXXXXXXXXXXXXXXXXL 176
M HIA+EGGCFVLSA+Q C R+DYP F ++ D + D L
Sbjct: 1 MTHIALEGGCFVLSANQFCLRKDYPPPPEYIFSGTDEDLTPDTVVCAGGSVIISPSGAVL 60
Query: 177 AGPNYQKECLISADLDL-SEINRAKTEFGAIGNNLKPDHVG-WCASELN 223
AGP+Y+ E LI+ADLD+ EI RAK +F +G+ +PD + W S N
Sbjct: 61 AGPDYKGEVLITADLDIHGEIARAKFDFDVVGHYSRPDVLSLWTYSTSN 109
>GSVIVT01022721001 assembled CDS
Length = 169
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%)
Query: 19 QLMCLMGVVERAGCYLFSTVLFFDSLGQRLGQQRKLMPVASESAVWYSGQKSSLPVYETS 78
++ ++GVVER G L+ TVLFFD G LG+ RKLMP E VW G S+ PVY+T
Sbjct: 94 KVYLVIGVVERDGYTLYCTVLFFDPEGNYLGKHRKLMPTYWERLVWGFGDCSTTPVYDTP 153
Query: 79 IGKI 82
G +
Sbjct: 154 YGNL 157