Jatropha Genome Database

JcCA0132071.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0132071.10 + phase: 0 
         (379 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01019680001 assembled CDS                                       569   e-163
GSVIVT01027437001 assembled CDS                                       561   e-160
GSVIVT01011429001 assembled CDS                                       237   6e-63
GSVIVT01038557001 assembled CDS                                       221   5e-58
GSVIVT01021404001 assembled CDS                                       100   1e-21
GSVIVT01012723001 assembled CDS                                        87   1e-17
GSVIVT01032233001 assembled CDS                                        73   2e-13
GSVIVT01028521001 assembled CDS                                        56   3e-08

>GSVIVT01019680001 assembled CDS
          Length = 659

 Score =  569 bits (1467), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 260/324 (80%), Positives = 296/324 (91%)

Query: 4   VQANGHRVMTISPRYDQYKDSWDTNVVIQIEVGGKLETVRFFHCYKRGVDRVFVDHPMFL 63
           + A GHRVM++SPRYDQYKD+WDT VV++I VG ++ETVRFFHCYKRGVDRVFVDHP FL
Sbjct: 162 MAARGHRVMSVSPRYDQYKDAWDTCVVVEIPVGDRIETVRFFHCYKRGVDRVFVDHPWFL 221

Query: 64  EKVWGKTGSKLYGPQAGTDYENNQLRFSLFCQAAIEAPRLLSLNSGKYFSGPYGEDVVFI 123
           EKVWGKTGSK+YGP AG DY +NQ+RFSLFCQA +EAPR+L+LNS KYFSGPYGEDVVFI
Sbjct: 222 EKVWGKTGSKIYGPSAGVDYIDNQMRFSLFCQAVLEAPRILNLNSSKYFSGPYGEDVVFI 281

Query: 124 ANDWHTALLPCYLKAFYKSKGMYRNAKVVFCIHNIAYQGRFAFSDFALLNLPERFKNSFD 183
           ANDWHTA+LPCYLK+ Y+S G+YRNAKVVFCIHNIAYQGRFAFSDF  LNLP+RFK+SFD
Sbjct: 282 ANDWHTAILPCYLKSMYQSSGIYRNAKVVFCIHNIAYQGRFAFSDFGFLNLPDRFKSSFD 341

Query: 184 FFDGYEKPVKGRKINWMKAGILESDRIVTVSPHYAEELVSGIEKGVELDNILRMTGISGI 243
           F DGY+KPVKGRKINWMKAGILE+DR+VTVSP+YAEELVSG  KGVELDNI+R   I+GI
Sbjct: 342 FMDGYKKPVKGRKINWMKAGILEADRVVTVSPYYAEELVSGEAKGVELDNIIRKATITGI 401

Query: 244 VNGMDVQEWNPSTDKYINVKYDSATVMEAKPLLKEALQAEVGLPIDRNIPVIGFIGRLEE 303
           VNGMDVQEWNPSTDK+I + Y++ TVM+AK LLKEALQAEVGLP+DRNIP+IGFIGRLEE
Sbjct: 402 VNGMDVQEWNPSTDKHIGIHYNATTVMDAKALLKEALQAEVGLPVDRNIPLIGFIGRLEE 461

Query: 304 QKGSDILAAAIPFLIQENVQIIIL 327
           QKGSDILAAAIP  I E+VQI++L
Sbjct: 462 QKGSDILAAAIPKFIDEDVQIVVL 485


>GSVIVT01027437001 assembled CDS
          Length = 614

 Score =  561 bits (1447), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 258/324 (79%), Positives = 292/324 (90%)

Query: 4   VQANGHRVMTISPRYDQYKDSWDTNVVIQIEVGGKLETVRFFHCYKRGVDRVFVDHPMFL 63
           + ANGHRVMT+SPR+DQYKD+WDT V +Q+ VG + E VRFFHCYKRGVDRVFVDHP FL
Sbjct: 117 MSANGHRVMTVSPRFDQYKDAWDTGVTVQLNVGDRFEKVRFFHCYKRGVDRVFVDHPWFL 176

Query: 64  EKVWGKTGSKLYGPQAGTDYENNQLRFSLFCQAAIEAPRLLSLNSGKYFSGPYGEDVVFI 123
           EKVWGKTGSKLYGP AG D+++NQLRFSL CQAA+EAPR+L+L S KYFSGPYGEDVVFI
Sbjct: 177 EKVWGKTGSKLYGPLAGEDFQDNQLRFSLLCQAALEAPRILNLKSSKYFSGPYGEDVVFI 236

Query: 124 ANDWHTALLPCYLKAFYKSKGMYRNAKVVFCIHNIAYQGRFAFSDFALLNLPERFKNSFD 183
           ANDWHTA L CYLK  Y+ KG Y NAKVVFCIHNIAYQGRFAF+DF+LLNLP+ FK+SFD
Sbjct: 237 ANDWHTAPLACYLKTMYRLKGRYGNAKVVFCIHNIAYQGRFAFADFSLLNLPDEFKSSFD 296

Query: 184 FFDGYEKPVKGRKINWMKAGILESDRIVTVSPHYAEELVSGIEKGVELDNILRMTGISGI 243
           F DGYEKPVKGRKINWMKAGILE+D+++TVSP+YA+ELVSG+EKGVELDNILR TGI+GI
Sbjct: 297 FTDGYEKPVKGRKINWMKAGILEADKVLTVSPYYAKELVSGVEKGVELDNILRRTGITGI 356

Query: 244 VNGMDVQEWNPSTDKYINVKYDSATVMEAKPLLKEALQAEVGLPIDRNIPVIGFIGRLEE 303
           +NGMDVQEWNP TDKYI++KYD++TV EAK LLKEALQAE GLP+DRNIPVIGFIGRLEE
Sbjct: 357 INGMDVQEWNPLTDKYISIKYDASTVKEAKLLLKEALQAEAGLPVDRNIPVIGFIGRLEE 416

Query: 304 QKGSDILAAAIPFLIQENVQIIIL 327
           QKGSDIL AAIP  +  NVQII+L
Sbjct: 417 QKGSDILVAAIPQFVTANVQIIVL 440


>GSVIVT01011429001 assembled CDS
          Length = 788

 Score =  237 bits (605), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 138/331 (41%), Positives = 192/331 (58%), Gaps = 36/331 (10%)

Query: 8   GHRVMTISPRYDQYKDSWDTNVVIQIEVGGKLETVRFFHCYKRGVDRVFVDHPMF--LEK 65
           GHRVM ++PRY  Y ++ +T V  + +V G+   V +F  Y  GVD VF+D  MF  +EK
Sbjct: 347 GHRVMVVAPRYGNYAEAQETGVRKKYKVDGQDMEVTYFQAYIDGVDFVFIDSHMFRHIEK 406

Query: 66  VWGKTGSKLYGPQAGTDYENNQL----RFSLFCQAAIEAPRLLSLNSGKYFSGPYGEDVV 121
                   +YG         N++    R  LFC+AAIE P  +      Y  G    ++V
Sbjct: 407 -------NIYG--------GNRMDILKRMVLFCKAAIEVPWHVPCGGVCYGDG----NLV 447

Query: 122 FIANDWHTALLPCYLKAFYKSKGMYRNAKVVFCIHNIAYQGRFAFSDFALLNLPERFKNS 181
           FIANDWHTALLP YLKA+Y+  G+ +  +    IHNIA+QGR    DF+   LPE + + 
Sbjct: 448 FIANDWHTALLPVYLKAYYRDNGLMQYTRSALVIHNIAHQGRGPVEDFSYTGLPEHYLDL 507

Query: 182 FDFFDGYEKPVKGRKINWMKAGILESDRIVTVSPHYAEELVSGIEKGVELDNILRMTG-- 239
           F  +D    PV G   N   AG+  +DR+VTVS  YA EL +  E G  L  I+      
Sbjct: 508 FKLYD----PVGGEHFNIFAAGLKTADRVVTVSHGYAWELKTS-EGGWGLHQIINENDWK 562

Query: 240 ISGIVNGMDVQEWNPSTDKYIN----VKYDSATVMEAKPLLKEALQAEVGLPIDRNIPVI 295
           + GIVNG+DV++WNP  D Y+     V Y   T+   KP  K ALQ E+GLPI  ++P+I
Sbjct: 563 LRGIVNGIDVKDWNPELDIYLESDGYVNYSLETLHTGKPQCKAALQKELGLPIREDVPLI 622

Query: 296 GFIGRLEEQKGSDILAAAIPFLIQENVQIII 326
           GFIGRL+ QKG D++A A+P+++ ++VQ++I
Sbjct: 623 GFIGRLDHQKGVDLIAEAVPWMVGQDVQLVI 653


>GSVIVT01038557001 assembled CDS
          Length = 568

 Score =  221 bits (563), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 135/341 (39%), Positives = 195/341 (57%), Gaps = 27/341 (7%)

Query: 2   LLVQANGHRVMTISPRYDQ-------YKDSWDTNVVIQIEVGGKLETVRFFHCYKRGVDR 54
           + + A+GHRVM +SPRY         +  + D    I++   G ++ V FFH Y+ GVD 
Sbjct: 85  IALAAHGHRVMVVSPRYQNGTCSDEIFSGASDLEHPIKVHCFGGVQEVSFFHEYRAGVDW 144

Query: 55  VFVDHPMFLEKVWGKTGSKLYGPQAGTDYENNQLRFSLFCQAAIEAPRLLSLNSGKYFSG 114
           VFVDHP +            YG   G  + +NQ RF+L C AA EAP +L L     F+ 
Sbjct: 145 VFVDHPSYHRP------GNPYGDGYGA-FGDNQFRFTLLCHAACEAPLVLPLGG---FT- 193

Query: 115 PYGEDVVFIANDWHTALLPCYLKAFYKSKGMYRNAKVVFCIHNIAYQGRFAFSDFALLNL 174
            YGE  +F+ NDWH +L+P  L A Y+  G+Y++A+ V  IHN+A+QG      +  L L
Sbjct: 194 -YGEKCLFLVNDWHASLVPVLLAAKYRPHGVYKDARTVLVIHNLAHQGVEPAVTYDNLGL 252

Query: 175 PERFKNSFDF-FDGYEKPV---KGRKINWMKAGILESDRIVTVSPHYAEELVSGIEKGVE 230
           P  +  + ++ F  + +      G+ +N +K  I+  DRI+TVS  YA E V+  E G  
Sbjct: 253 PPEWYGAVEWVFPTWARTHALDTGQAVNLLKGAIVTVDRILTVSKGYAWE-VTTPEGGYG 311

Query: 231 LDNIL--RMTGISGIVNGMDVQEWNPSTDKYINVKYDSATVMEAKPLLKEALQAEVGLPI 288
           L  +L  R   I+GI NG+DV EW+PS+D++I   Y SA  +  K   K ALQ E+ LPI
Sbjct: 312 LHELLTSRKAVINGITNGIDVSEWDPSSDEHIPFHY-SAEDLSGKVQCKIALQKELSLPI 370

Query: 289 DRNIPVIGFIGRLEEQKGSDILAAAIPFLIQENVQIIILVS 329
             + P+IGFIGRL+ QKG D++  A P L+ E+VQ+++L S
Sbjct: 371 RPDCPLIGFIGRLDYQKGIDVIRLATPELMGEDVQLVMLGS 411


>GSVIVT01021404001 assembled CDS
          Length = 1011

 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 159/351 (45%), Gaps = 68/351 (19%)

Query: 4   VQANGHRVMTISPRYD--QYKDSWDTNVVIQIEVGGKLETVRFFHCYKRGVDRVFVDHPM 61
           +Q  GH V  + P+YD  QY    D  V+        +E   +F            D  +
Sbjct: 543 LQKKGHLVEIVLPKYDCMQYDRIRDLRVL-------DMELESYF------------DGRL 583

Query: 62  FLEKVWGKTGSKL-------YGPQA----GTDY--ENNQLRFSLFCQAAIEAPRLLSLNS 108
           F  KVW  T   L       + P      GT Y   ++  RFS F +AA+E    L L +
Sbjct: 584 FRNKVWVGTVEGLPVYFIEPHHPSKFFWRGTVYGEHDDFRRFSYFSRAALE----LLLQA 639

Query: 109 GKYFSGPYGEDVVFIANDWHTALLPCYLKAFYKSKGMYRNAKVVFCIHNIAYQGRFAFSD 168
           GK        D++   +DW TA +       Y  KG+  +A++ F  HN  YQG    S+
Sbjct: 640 GK------KPDIIH-CHDWQTAFVAPLYWDLYAPKGL-NSARICFTCHNFEYQGTAPASE 691

Query: 169 FAL-------LNLPERFKNSFDFFDGYEKPVKGRKINWMKAGILESDRIVTVSPHYAEEL 221
            A        LN P+R +++              ++N +K  I+ S+ + TVSP YA+E+
Sbjct: 692 MASCGLDVHHLNRPDRMQDN----------SAHDRVNPVKGAIVFSNIVTTVSPTYAQEV 741

Query: 222 VSGIEKGVELDNILRMTGIS--GIVNGMDVQEWNPSTDKYINVKYDSATVMEAKPLLKEA 279
            +  E G  L + L        GI+NG+D   W+P+TD Y+  +++ A  ++ K   KEA
Sbjct: 742 RTS-EGGRGLHSTLNSHSKKFIGILNGIDTDAWDPATDVYLKSQFN-ANDLQGKAENKEA 799

Query: 280 LQAEVGLP-IDRNIPVIGFIGRLEEQKGSDILAAAIPFLIQENVQIIILVS 329
           L+  +GL   D   P++G I RL  QKG  ++  AI   ++   Q ++L S
Sbjct: 800 LRKHLGLSYADTRRPLVGCIARLVPQKGIHLIRHAIYRTLELGGQFVLLGS 850


>GSVIVT01012723001 assembled CDS
          Length = 1046

 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 107/245 (43%), Gaps = 54/245 (22%)

Query: 85  NNQLRFSLFCQAAIEAPRLLSLNSGKYFSGPYGEDVVFIANDWHTALLPCYLKAFYKSKG 144
           N+  RF  FC AA+E      L SG      +  D++   +DW +A +    K  YK  G
Sbjct: 697 NDGERFGFFCHAALE----FLLQSG------FHPDIIH-CHDWSSAPVSWLFKDHYKHYG 745

Query: 145 MYRNAKVVFCIHNIAYQGRFAFSDFALLNLPERFKNSFDFFDGYEKPVKGRKINWMKAGI 204
           + + A+VVF IHN+ +                                       +   +
Sbjct: 746 LSK-ARVVFTIHNLEFGAPL-----------------------------------IAKAM 769

Query: 205 LESDRIVTVSPHYAEELVSGIEKGVELDNILRMTGISGIVNGMDVQEWNPSTDKYINVKY 264
           + +D+  TVS  Y+ E+         L          GI+NG+D+  W+P  DK+I V Y
Sbjct: 770 VYTDKATTVSHTYSREVSGNPAIAPHL------YKFHGILNGIDLDIWDPYNDKFIPVPY 823

Query: 265 DSATVMEAKPLLKEALQAEVGLPIDRNIPVIGFIGRLEEQKGSDILAAAIPFLIQENVQI 324
            S  V+E K   KEALQ  +GL    + P++G I RL  QKG  ++  AI   ++ N Q+
Sbjct: 824 ISDNVVEGKRAAKEALQQRLGLK-KSDFPLVGIITRLTHQKGIHLIKHAIWRTLERNGQV 882

Query: 325 IILVS 329
           ++L S
Sbjct: 883 VLLGS 887


>GSVIVT01032233001 assembled CDS
          Length = 608

 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 18/222 (8%)

Query: 119 DVVFIANDWHTALLPCYLKAFYKSKGMYRNAKVVFCIHNIAYQGRFAFSDFALLNLPERF 178
           D++ I ++W T  LP      Y    + +  ++V  IHN+ + G     + +   L    
Sbjct: 236 DIIHI-HEWQTGSLPLLYWDMYHYLSL-KKPRIVLTIHNMEHYGECRKEELSKCGLDGSI 293

Query: 179 KNSFD-FFDGYEKPVKGRKINWMKAGILESDRIVTVSPHYAEELVSGIEKGVELDNILRM 237
             + D   D         +++ +K GI+ S+ ++TVSP Y +E +        L  IL  
Sbjct: 294 YATLDKAVDDRTIGHNPERLSLLKGGIVYSNVVITVSPTYLKETLCSGWLASTL--ILNR 351

Query: 238 TGISGIVNGMDVQEWNPSTDKYINVKYDSATVMEAKPLLKEALQAEVGL----------- 286
               G++NG+D   WNP+TD ++  K+++    E K + K  +Q  +GL           
Sbjct: 352 DKYYGVLNGIDTAMWNPATDVFLPSKFNARNT-EGKKICKYYVQRGLGLILKGTSASKLI 410

Query: 287 -PIDRNIPVIGFIGRLEEQKGSDILAAAIPFLIQENVQIIIL 327
             ++  +P+I  I RL  QKG  ++  AI  + +   QII+L
Sbjct: 411 NEMENKVPLIVCISRLVAQKGLHLITHAIKQVEERGGQIIVL 452


>GSVIVT01028521001 assembled CDS
          Length = 93

 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/38 (63%), Positives = 29/38 (76%)

Query: 151 VVFCIHNIAYQGRFAFSDFALLNLPERFKNSFDFFDGY 188
           + FCIHNI YQG+F FS F  LN+ ++FK SFDF DGY
Sbjct: 8   ISFCIHNIVYQGKFVFSYFTFLNMLDKFKGSFDFRDGY 45