Jatropha Genome Database
- JcCA0129501.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0129501.20 + phase: 0
(221 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01016510001 assembled CDS 75 3e-14
GSVIVT01025573001 assembled CDS 73 9e-14
GSVIVT01025505001 assembled CDS 68 4e-12
GSVIVT01024920001 assembled CDS 65 2e-11
GSVIVT01019972001 assembled CDS 65 2e-11
GSVIVT01008170001 assembled CDS 65 3e-11
GSVIVT01037379001 assembled CDS 64 4e-11
GSVIVT01008897001 assembled CDS 62 2e-10
GSVIVT01029063001 assembled CDS 59 1e-09
GSVIVT01015309001 assembled CDS 59 3e-09
GSVIVT01034134001 assembled CDS 58 3e-09
GSVIVT01022973001 assembled CDS 55 2e-08
GSVIVT01022971001 assembled CDS 54 4e-08
GSVIVT01020763001 assembled CDS 54 5e-08
GSVIVT01016511001 assembled CDS 54 7e-08
GSVIVT01035508001 assembled CDS 54 7e-08
GSVIVT01024921001 assembled CDS 53 1e-07
GSVIVT01020765001 assembled CDS 52 2e-07
GSVIVT01020764001 assembled CDS 49 1e-06
GSVIVT01026184001 assembled CDS 49 2e-06
GSVIVT01025848001 assembled CDS 49 2e-06
GSVIVT01016661001 assembled CDS 48 3e-06
GSVIVT01034782001 assembled CDS 47 5e-06
GSVIVT01018761001 assembled CDS 47 5e-06
GSVIVT01035519001 assembled CDS 47 7e-06
GSVIVT01007975001 assembled CDS 47 9e-06
>GSVIVT01016510001 assembled CDS
Length = 761
Score = 74.7 bits (182), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 149 ASKYAIQALEKVKVMEEDKDFWEQCIICLEDLCIGMEGTKMPCLHVYHESCIANWLQKSN 208
ASK AI+A+ +++ + + C +C E +G E +MPC H+YH CI WL N
Sbjct: 137 ASKAAIEAMPTIEIADAHVNTEHHCAVCKEPFELGAEAREMPCKHIYHSDCILPWLSLRN 196
Query: 209 TCPLCRFQLPS 219
+CP+CR +LPS
Sbjct: 197 SCPVCRHELPS 207
>GSVIVT01025573001 assembled CDS
Length = 515
Score = 73.2 bits (178), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 140 DSQDSRFLGASKYAIQALEKVKVMEEDKDFWEQCIICLEDLCIGMEGTKMPCLHVYHESC 199
D + +F+GAS ++ AL V+V D +C+IC E++ G + ++PC H++H C
Sbjct: 161 DVELGKFVGASTASVVALPSVEV----SDGGVECVICKEEMRQGRDVCELPCEHLFHWMC 216
Query: 200 IANWLQKSNTCPLCRFQLPSFD 221
I WL K NTCP CRFQLPS D
Sbjct: 217 ILPWLVKRNTCPCCRFQLPSDD 238
>GSVIVT01025505001 assembled CDS
Length = 349
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 149 ASKYAIQALEKVKVMEEDKDFWEQCIICLEDLCIGMEGTKMPCLHVYHESCIANWLQKSN 208
A K AI+A+ VK+ E QC +CL+D IG E +MPC H +H CI WL+ +
Sbjct: 175 AQKDAIEAMPTVKIKEN-----LQCSVCLDDFEIGAEAREMPCKHKFHSGCILPWLELHS 229
Query: 209 TCPLCRFQLPS 219
+CP+CRFQ+ +
Sbjct: 230 SCPVCRFQIAA 240
>GSVIVT01024920001 assembled CDS
Length = 538
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 149 ASKYAIQALEKVKVMEEDKDFWEQCIICLEDLCIGMEGTKMPCLHVYHESCIANWLQKSN 208
ASK A++++ ++++ C +C E +G E +MPC H+YH CI WL N
Sbjct: 280 ASKAAVESMPTIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRN 339
Query: 209 TCPLCRFQLPS 219
+CP+CR +LP+
Sbjct: 340 SCPVCRHELPT 350
>GSVIVT01019972001 assembled CDS
Length = 331
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 149 ASKYAIQALEKVKVMEEDKDFWEQCIICLEDLCIGMEGTKMPCLHVYHESCIANWLQKSN 208
A+K +I+A+ V+V +D +C+ICLE+ +G +MPC H +HE+CI WL
Sbjct: 213 ATKASIEAMPSVEVGGDDG----ECVICLEEWKVGCVAKEMPCKHKFHENCIVKWLGIHG 268
Query: 209 TCPLCRFQLP 218
+CP+CR ++P
Sbjct: 269 SCPVCRHKMP 278
>GSVIVT01008170001 assembled CDS
Length = 1427
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 128 DHDDPVMESEY------FDSQDSRFLG---ASKYAIQALEKVKVMEED-KDFWEQCIICL 177
DH D + SEY F ++ G ASK ++ L V + + D ++ C +C
Sbjct: 1242 DHYDYIYTSEYDMLFGQFAENENALTGRPPASKSVVKNLPVVVLTQGDVENNNALCAVCK 1301
Query: 178 EDLCIGMEGTKMPCLHVYHESCIANWLQKSNTCPLCRFQLPSFD 221
+++ +G ++PC H YH CI WL NTCP+CR++LP+ D
Sbjct: 1302 DEINVGELAKQLPCSHRYHGDCIMPWLGIRNTCPVCRYELPTDD 1345
>GSVIVT01037379001 assembled CDS
Length = 179
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 149 ASKYAIQALEKVKVMEEDKDFWEQCIICLEDLCIGMEGTKMPCLHVYHESCIANWLQKSN 208
A++ +I A+ +K+ + C +C + +G E +MPC H+YH CI WL + N
Sbjct: 78 ATRSSIDAMPTIKITQRHLRSDSHCPVCKDKFELGSEARQMPCDHIYHSDCIVPWLVQHN 137
Query: 209 TCPLCRFQLP 218
+CP+CR +LP
Sbjct: 138 SCPVCRQELP 147
>GSVIVT01008897001 assembled CDS
Length = 303
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%)
Query: 149 ASKYAIQALEKVKVMEEDKDFWEQCIICLEDLCIGMEGTKMPCLHVYHESCIANWLQKSN 208
A AI A+ VK+ C +C E+ +G E ++PC HVYH CI WLQ N
Sbjct: 182 APDSAINAMPTVKITPTHLINDSHCPVCKEEFKVGEEVRELPCNHVYHSDCIVPWLQLHN 241
Query: 209 TCPLCRFQLP 218
+CP+CR ++P
Sbjct: 242 SCPVCRHEVP 251
>GSVIVT01029063001 assembled CDS
Length = 8784
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 142 QDSRFLGASKYAIQALEKVKVMEEDKDFWEQCIICLEDLCIGMEGTKMPCLHVYHESCIA 201
+++ +GAS + +L + V ++ F E C ICLE IG +PCLH +H+ CI
Sbjct: 8710 ENNHNVGASVNQMNSLPQSTVQTDN--FEESCAICLETPTIGDTIRHLPCLHKFHKDCID 8767
Query: 202 NWLQKSNTCPLCR 214
WL +S +CP+C+
Sbjct: 8768 PWLARSTSCPVCK 8780
>GSVIVT01015309001 assembled CDS
Length = 168
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 171 EQCIICLEDLCIGMEGTKMPCLHVYHESCIANWLQKSNTCPLCRFQLPSFD 221
+ C +C E G G ++PC H YH CIA+WL N+CPLCR +P D
Sbjct: 118 DACTVCREGFQSGEGGKQLPCGHFYHAGCIASWLSLRNSCPLCRCSVPGED 168
>GSVIVT01034134001 assembled CDS
Length = 470
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 149 ASKYAIQALEKVKVMEEDKDFWEQCIICLEDLCIGMEGTKMPCLHVYHESCIANWLQKSN 208
ASK A+++L +K++ C +C E + E ++PC H+YH CI WL N
Sbjct: 303 ASKAAVESLPTIKIVASHVLSESHCAVCKEPFELDSEARELPCKHIYHSDCILPWLSLRN 362
Query: 209 TCPLCRFQ 216
+CP+CR +
Sbjct: 363 SCPVCRHE 370
>GSVIVT01022973001 assembled CDS
Length = 451
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 154 IQALEKVKVMEEDKDFWEQCIICLEDLCIGMEGTKMPCLHVYHESCIANWLQKSNTCPLC 213
I+AL V++ C +C E+ G E +MPC H+YH CI WL+ N+CP+C
Sbjct: 184 IEALPSVRLTPTHLRNDPCCPVCKEEYRAGEEVREMPCNHLYHSDCIVPWLRIHNSCPVC 243
Query: 214 RFQL 217
R++L
Sbjct: 244 RYEL 247
>GSVIVT01022971001 assembled CDS
Length = 278
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 154 IQALEKVKVMEEDKDFWEQCIICLEDLCIGMEGTKMPCLHVYHESCIANWLQKSNTCPLC 213
I+AL V++ C +C E+ G E +MPC H+YH CI WL+ N+CP+C
Sbjct: 184 IEALPSVRLTPTHLRNDPCCPVCKEEYQAGEEVREMPCKHMYHSDCIVPWLRIHNSCPVC 243
Query: 214 RFQL 217
R +L
Sbjct: 244 RHEL 247
>GSVIVT01020763001 assembled CDS
Length = 239
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 161 KVMEEDKDFWEQCIICLEDLCIGMEGTKMPCLHVYHESCIANWLQKSNTCPLCRFQL 217
K E+D+D E C+ICLED E PC H++HE CI W++ CP+CR Q
Sbjct: 173 KEKEKDQDT-ETCVICLEDFKPEEEVMLTPCNHMFHEDCIVPWVKSHGQCPICRLQF 228
>GSVIVT01016511001 assembled CDS
Length = 275
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 173 CIICLEDLCIGMEGTKMPCLHVYHESCIANWLQKSNTCPLCRFQ 216
C +CLE + +G +PCLH +H +CI WL++ TCP+C+F+
Sbjct: 213 CSVCLEQVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVCKFR 256
>GSVIVT01035508001 assembled CDS
Length = 293
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 140 DSQDSRFLGASKYAIQALEKVKVMEEDKDFWE---QCIICLEDLCIGMEGTKMPCLHVYH 196
D++ R ASK + L + + E+ +C IC E+ + + ++PC H +H
Sbjct: 177 DTRAPRVPPASKEVVANLPVITLTEDALSKLSGDAECAICKENFVVDDKMQELPCKHTFH 236
Query: 197 ESCIANWLQKSNTCPLCRFQLPSFD 221
C+ WL K N+CP+CR +L + D
Sbjct: 237 PPCLKPWLDKHNSCPICRHELLTDD 261
>GSVIVT01024921001 assembled CDS
Length = 279
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 173 CIICLEDLCIGMEGTKMPCLHVYHESCIANWLQKSNTCPLCRFQL 217
C ICLE + G +PCLH +H +CI WL++ TCP+C+F++
Sbjct: 217 CSICLEQVNRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKFRV 261
>GSVIVT01020765001 assembled CDS
Length = 232
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 163 MEEDKDFWEQCIICLEDLCIGMEGTKMPCLHVYHESCIANWLQKSNTCPLCRF 215
+ E + E+C ICLED I E PC H++HE CI W++ + CP+CRF
Sbjct: 135 INEQNEGRERCAICLEDFEIE-EVLVTPCNHIFHEECIIPWVKSHDQCPVCRF 186
>GSVIVT01020764001 assembled CDS
Length = 224
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 171 EQCIICLEDLCIGMEGTKMPCLHVYHESCIANWLQKSNTCPLCRFQL 217
++C ICLED + PC H++HE CI W++ CP+CRF +
Sbjct: 158 KRCAICLEDFEPREQVLLTPCNHMFHEDCIVPWVKNHGQCPVCRFAI 204
>GSVIVT01026184001 assembled CDS
Length = 308
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 148 GASKYAIQALEKV--KVMEEDKDFWEQCIICLEDLCIGMEGTKMPCLHVYHESCIANWLQ 205
G S I +L V K + + C+IC D G T + C H YH CI NWLQ
Sbjct: 233 GLSSDTIASLPSVTYKAQSNQEGSNDSCVICRLDYEDGETLTVLSCKHSYHSECINNWLQ 292
Query: 206 KSNTCPLCRFQLPS 219
+ CP+C ++ S
Sbjct: 293 INKVCPICSTEVSS 306
>GSVIVT01025848001 assembled CDS
Length = 241
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 171 EQCIICLEDLCIGMEGTKMPCLHVYHESCIANWLQKSNTCPLCRFQLPSFD 221
+C ICL G E +PC H +H CI+ WL+ + TCPLC+F + D
Sbjct: 188 SECCICLSRYVDGAELYILPCNHHFHCGCISRWLRINATCPLCKFNILRGD 238
>GSVIVT01016661001 assembled CDS
Length = 912
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 164 EEDKDFWEQCIICLEDLCIGMEGTKMP-CLHVYHESCIANWLQKSNTCPLCR 214
EE KD E C +CL +L G + +P C H +H CI W Q +TCPLCR
Sbjct: 114 EEFKDGLE-CAVCLSELVTGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCR 164
>GSVIVT01034782001 assembled CDS
Length = 424
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 141 SQDSRFLGASKYAIQALEKV--KVMEEDKDFWEQCIICLEDLCIGMEGTKMPCLHVYHES 198
S+ F G S ++A+ + + ED C ICLED +G + +PC H +H
Sbjct: 185 SRVREFHGMSSRLVKAMPSLIFTTVLEDNCTSRTCAICLEDYNVGEKLRILPCRHKFHAF 244
Query: 199 CIANWLQKSNT-CPLCR 214
C+ +WL T CP+C+
Sbjct: 245 CVDSWLTSWRTFCPVCK 261
>GSVIVT01018761001 assembled CDS
Length = 352
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 171 EQCIICLEDLCIGMEGTKMPCLHVYHESCIANWLQKSNT-CPLCRFQLPS 219
+ C ICLED G +PC H +H SC+ +WL K T CP+C++ L +
Sbjct: 287 DTCSICLEDYKDGERLRVLPCQHEFHASCVDSWLTKWGTFCPVCKYDLST 336
>GSVIVT01035519001 assembled CDS
Length = 403
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 172 QCIICLEDLCIGMEGTKMPCLHVYHESCIANWLQKSNTCPLCR 214
+C IC E+ +G E K+ C H YH +CI WL+ N CP+C+
Sbjct: 356 KCSICQEEYMVGDEVGKLQCEHGYHVACIHQWLRLKNWCPVCK 398
>GSVIVT01007975001 assembled CDS
Length = 217
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 173 CIICLEDLCIGMEGTKMP-CLHVYHESCIANWLQKSNTCPLCR 214
C ICL+D+ +G +P C H +H +C+ WL + TCP+CR
Sbjct: 172 CTICLQDIEVGEIARSLPWCHHTFHLACVDKWLIRHGTCPVCR 214