Jatropha Genome Database

JcCA0120961.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0120961.20 - phase: 0 /partial
         (202 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01018265001 assembled CDS                                       283   4e-77
GSVIVT01008074001 assembled CDS                                       237   3e-63
GSVIVT01032599001 assembled CDS                                       234   3e-62
GSVIVT01029244001 assembled CDS                                       219   8e-58
GSVIVT01035525001 assembled CDS                                       218   1e-57
GSVIVT01016862001 assembled CDS                                       214   3e-56
GSVIVT01001052001 assembled CDS                                       214   3e-56
GSVIVT01002509001 assembled CDS                                       207   2e-54
GSVIVT01016652001 assembled CDS                                       194   3e-50
GSVIVT01019734001 assembled CDS                                       157   2e-39
GSVIVT01019738001 assembled CDS                                       150   5e-37

>GSVIVT01018265001 assembled CDS
          Length = 958

 Score =  283 bits (724), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 145/203 (71%), Positives = 160/203 (78%), Gaps = 2/203 (0%)

Query: 2   ELEEQLASAVYLQVSTISQALIFVTRSRSWSFRERPGLLLFNAFIVAQLIATVISAIATW 61
           EL+EQLASAVYLQVSTISQALIFVTRSR+WSF ERPGLLL  AFI+AQLIATVISA ATW
Sbjct: 756 ELKEQLASAVYLQVSTISQALIFVTRSRNWSFTERPGLLLVTAFIIAQLIATVISATATW 815

Query: 62  KFAGIRSIGWGWTGVIWLYNMLTYLLLDPIKFAVRYALSGKAWDLVVEQRTAFTNKKNFG 121
           KFAGIR IGWGWT +IW+YN+LTYLLLDPIKFAVRYALSG+AW LVV QRTAFTN+K+FG
Sbjct: 816 KFAGIRKIGWGWTAIIWVYNILTYLLLDPIKFAVRYALSGRAWGLVVNQRTAFTNQKDFG 875

Query: 122 KXXXXXXXXXXQRTLHGLRSAER-KLFSERNTFGDISXXXXXXXXXXXXXXXXXLHTLKG 180
           K          QRTLHGL+SAE   +FS+R TF DI+                 L TLKG
Sbjct: 876 KEAREAKWAAEQRTLHGLQSAEMASMFSQRGTFRDINLMAEEARRRAEISRLRELRTLKG 935

Query: 181 KVESFAKLRGLDIDA-INQHYTV 202
           +VESFAKLRGLDID+ IN HYTV
Sbjct: 936 RVESFAKLRGLDIDSNINPHYTV 958


>GSVIVT01008074001 assembled CDS
          Length = 956

 Score =  237 bits (604), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 114/197 (57%), Positives = 141/197 (71%)

Query: 6   QLASAVYLQVSTISQALIFVTRSRSWSFRERPGLLLFNAFIVAQLIATVISAIATWKFAG 65
           +LASA+YLQVST+SQALIFVTRSRSWS+ ERPGLLL  AF+VAQL+AT+I+  A W FA 
Sbjct: 760 KLASAIYLQVSTVSQALIFVTRSRSWSYVERPGLLLVGAFLVAQLVATLIAVYANWSFAA 819

Query: 66  IRSIGWGWTGVIWLYNMLTYLLLDPIKFAVRYALSGKAWDLVVEQRTAFTNKKNFGKXXX 125
           I  IGWGW GVIWLYN++ Y+ LD IKF +RYALSG+AWDLV+EQR AFT +K+FGK   
Sbjct: 820 IEGIGWGWAGVIWLYNIIFYIPLDFIKFIIRYALSGRAWDLVIEQRIAFTRQKDFGKEAR 879

Query: 126 XXXXXXXQRTLHGLRSAERKLFSERNTFGDISXXXXXXXXXXXXXXXXXLHTLKGKVESF 185
                  QRTLHGL+  + K+F++R  F +++                 LHTLKG VES 
Sbjct: 880 ELKWAHAQRTLHGLQPPDTKMFTDRTNFTELNQMAEEAKRRAEIARLRELHTLKGHVESV 939

Query: 186 AKLRGLDIDAINQHYTV 202
            +L+GLDI+ I Q YTV
Sbjct: 940 VRLKGLDINTIPQAYTV 956


>GSVIVT01032599001 assembled CDS
          Length = 955

 Score =  234 bits (596), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 117/197 (59%), Positives = 138/197 (70%), Gaps = 1/197 (0%)

Query: 6   QLASAVYLQVSTISQALIFVTRSRSWSFRERPGLLLFNAFIVAQLIATVISAIATWKFAG 65
           +LASAVYLQVS ISQALIFVTR+RSWSF ERPGLLL  AF++AQLIAT+I+  A W FA 
Sbjct: 760 KLASAVYLQVSIISQALIFVTRARSWSFVERPGLLLVVAFVIAQLIATLIAVYANWSFAA 819

Query: 66  IRSIGWGWTGVIWLYNMLTYLLLDPIKFAVRYALSGKAWDLVVEQRTAFTNKKNFGKXXX 125
           I  IGWGW GVIWLYN++ Y+ LD IKF +RYALSGKAWDLV+EQR AFT KK+FGK   
Sbjct: 820 IEGIGWGWAGVIWLYNLVCYIPLDFIKFIIRYALSGKAWDLVIEQRIAFTRKKDFGKEAR 879

Query: 126 XXXXXXXQRTLHGLRSAERKLFSERNTFGDISXXXXXXXXXXXXXXXXXLHTLKGKVESF 185
                  QRTLHGL   E K+F++ N   +++                 LHTLKG VES 
Sbjct: 880 ELKWALAQRTLHGLHPPETKMFTDHN-ITELNQMAEEAKRRAEIARLRELHTLKGHVESV 938

Query: 186 AKLRGLDIDAINQHYTV 202
            +L+GLDI+ I Q YTV
Sbjct: 939 VRLKGLDINTIQQAYTV 955


>GSVIVT01029244001 assembled CDS
          Length = 954

 Score =  219 bits (557), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 107/198 (54%), Positives = 139/198 (70%), Gaps = 1/198 (0%)

Query: 6   QLASAVYLQVSTISQALIFVTRSRSWSFRERPGLLLFNAFIVAQLIATVISAIATWKFAG 65
           ++ +A+YLQVS +SQALIFVTRSRSWSF ERPGLLL  AFI+AQL+AT+I+  A W FA 
Sbjct: 757 EMMAALYLQVSVVSQALIFVTRSRSWSFVERPGLLLVTAFIIAQLVATLIAVYANWGFAR 816

Query: 66  IRSIGWGWTGVIWLYNMLTYLLLDPIKFAVRYALSGKAWDLVVEQRTAFTNKKNFGKXXX 125
           I+ +GWGW GV+W+Y+++ Y+ LD IKF +RY LSGKAW  ++E +TAFT KK++GK   
Sbjct: 817 IKGMGWGWAGVVWIYSVVFYVPLDFIKFFIRYILSGKAWLNLLENKTAFTTKKDYGKEER 876

Query: 126 XXXXXXXQRTLHGLRSAE-RKLFSERNTFGDISXXXXXXXXXXXXXXXXXLHTLKGKVES 184
                  QRTLHGL+  E   LF+++N++ ++S                 LHTLKG VES
Sbjct: 877 EAQWALAQRTLHGLQPPETSNLFNDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVES 936

Query: 185 FAKLRGLDIDAINQHYTV 202
             KL+GLDID I QHYTV
Sbjct: 937 VVKLKGLDIDTIQQHYTV 954


>GSVIVT01035525001 assembled CDS
          Length = 862

 Score =  218 bits (556), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 108/200 (54%), Positives = 138/200 (69%), Gaps = 1/200 (0%)

Query: 4   EEQLASAVYLQVSTISQALIFVTRSRSWSFRERPGLLLFNAFIVAQLIATVISAIATWKF 63
           E ++ +A+YLQVS +SQALIFVTRSRSWS+ ERPGLLL  AFI AQL+ATVIS  A W F
Sbjct: 663 EHEMMAALYLQVSIVSQALIFVTRSRSWSYVERPGLLLVGAFIAAQLVATVISVYANWGF 722

Query: 64  AGIRSIGWGWTGVIWLYNMLTYLLLDPIKFAVRYALSGKAWDLVVEQRTAFTNKKNFGKX 123
           A I+  GWGW GVIWLY+++TY+ LD +KFA+RY  SGKAWD ++E +TAFT KK++GK 
Sbjct: 723 ARIKGTGWGWAGVIWLYSVVTYVPLDFLKFAIRYIQSGKAWDNLLENKTAFTTKKDYGKE 782

Query: 124 XXXXXXXXXQRTLHGLRSAE-RKLFSERNTFGDISXXXXXXXXXXXXXXXXXLHTLKGKV 182
                    QRTLHGL+  E   +FS+++ + ++S                 L+TLKG +
Sbjct: 783 EREAQWAAAQRTLHGLQPPETSNIFSDKSGYRELSEIAEQAKRRAEVARLRELNTLKGHM 842

Query: 183 ESFAKLRGLDIDAINQHYTV 202
           ES  KL+GLDID I  HYTV
Sbjct: 843 ESVVKLKGLDIDTIQHHYTV 862


>GSVIVT01016862001 assembled CDS
          Length = 952

 Score =  214 bits (544), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 103/200 (51%), Positives = 137/200 (68%), Gaps = 1/200 (0%)

Query: 4   EEQLASAVYLQVSTISQALIFVTRSRSWSFRERPGLLLFNAFIVAQLIATVISAIATWKF 63
           + +L + VYLQVS +SQALIFVTRS+ WSF ERPGLLL +AF++AQL+AT I+  A W F
Sbjct: 753 KHELTAVVYLQVSIVSQALIFVTRSQGWSFIERPGLLLVSAFLIAQLVATFIAVYANWGF 812

Query: 64  AGIRSIGWGWTGVIWLYNMLTYLLLDPIKFAVRYALSGKAWDLVVEQRTAFTNKKNFGKX 123
           A I+  GWGW GVIWLY+++ Y  LD +KF +RYAL+GKAWD +++ +TAFT KK++G+ 
Sbjct: 813 AKIKGCGWGWAGVIWLYSIVFYFPLDILKFFIRYALTGKAWDTLLQNKTAFTTKKDYGRG 872

Query: 124 XXXXXXXXXQRTLHGLRSAE-RKLFSERNTFGDISXXXXXXXXXXXXXXXXXLHTLKGKV 182
                    QRTLHGL+  +  +LF+E+  + ++S                 LHTLKG V
Sbjct: 873 EREAQWALAQRTLHGLQPPQTSELFTEKGNYRELSEMAEQAKRRAEVARLRELHTLKGHV 932

Query: 183 ESFAKLRGLDIDAINQHYTV 202
           ES  KL+GLDI+ I QHYTV
Sbjct: 933 ESVVKLKGLDIEGIQQHYTV 952


>GSVIVT01001052001 assembled CDS
          Length = 952

 Score =  214 bits (544), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 103/199 (51%), Positives = 136/199 (68%), Gaps = 1/199 (0%)

Query: 5   EQLASAVYLQVSTISQALIFVTRSRSWSFRERPGLLLFNAFIVAQLIATVISAIATWKFA 64
           +++ +A+YLQVS +SQALIFVTRS+SWSF ERPGLLL  AFI AQL+AT I+   +W FA
Sbjct: 754 DEVTAALYLQVSIVSQALIFVTRSQSWSFVERPGLLLVGAFIAAQLVATCIAVYPSWGFA 813

Query: 65  GIRSIGWGWTGVIWLYNMLTYLLLDPIKFAVRYALSGKAWDLVVEQRTAFTNKKNFGKXX 124
            I  IGWGW G IWL++++TY  LD +KF +RY LSGKAWD +++ +TAFT KK++G+  
Sbjct: 814 RIEGIGWGWAGAIWLFSIITYFPLDILKFIIRYGLSGKAWDNLLQNKTAFTTKKDYGRGE 873

Query: 125 XXXXXXXXQRTLHGLRSAE-RKLFSERNTFGDISXXXXXXXXXXXXXXXXXLHTLKGKVE 183
                   QRTLHGL+  E   LF++ +++ ++S                 LHTLKG VE
Sbjct: 874 REAQWALAQRTLHGLQPPETSNLFNDNSSYRELSEIAEQAKRRAEVARLRELHTLKGHVE 933

Query: 184 SFAKLRGLDIDAINQHYTV 202
           S  KL+GLDI+ I QHYTV
Sbjct: 934 SVVKLKGLDIETIQQHYTV 952


>GSVIVT01002509001 assembled CDS
          Length = 168

 Score =  207 bits (527), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 101/168 (60%), Positives = 123/168 (73%), Gaps = 1/168 (0%)

Query: 35  ERPGLLLFNAFIVAQLIATVISAIATWKFAGIRSIGWGWTGVIWLYNMLTYLLLDPIKFA 94
           +RPGL L  AFI+AQL+ATVISA  +WK AGI+ IGWGWTGVIWLYN+LTY+LLDPIKF 
Sbjct: 2   DRPGLALVAAFIIAQLVATVISATLSWKLAGIKKIGWGWTGVIWLYNILTYMLLDPIKFG 61

Query: 95  VRYALSGKAWDLVVEQRTAFTNKKNFGKXXXXXXXXXXQRTLHGLRSAERKLFSERNTFG 154
           VRYALSG+AW L+++QR AF+N+KNFGK          QRTLHGL+S E K+   RNT+G
Sbjct: 62  VRYALSGRAWGLMLDQRMAFSNQKNFGKEAREAAWAAEQRTLHGLQSTEAKVPFGRNTYG 121

Query: 155 DISXXXXXXXXXXXXXXXXXLHTLKGKVESFAKLRGLDIDAINQHYTV 202
           + S                 +HTLKGK+ESFAKLRGLDI A++ HYT+
Sbjct: 122 ETSVMAEEAKRRAEIARLREIHTLKGKIESFAKLRGLDI-AVHPHYTL 168


>GSVIVT01016652001 assembled CDS
          Length = 970

 Score =  194 bits (492), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 99/198 (50%), Positives = 133/198 (67%), Gaps = 5/198 (2%)

Query: 5   EQLASAVYLQVSTISQALIFVTRSRSWSFRERPGLLLFNAFIVAQLIATVISAIATWKFA 64
           E+++SA+YLQVS ISQALIFVTRS+SWSF ERPG LL  AF+VAQL+AT+I+  A   FA
Sbjct: 778 EEISSAIYLQVSIISQALIFVTRSQSWSFMERPGALLMCAFVVAQLVATLIAVYAEISFA 837

Query: 65  GIRSIGWGWTGVIWLYNMLTYLLLDPIKFAVRYALSGKAWDLVVEQRTAFTNKKNFGKXX 124
            I  IGWGW GVIW+Y+++ Y+ LD IKF VRYALSG+AW+L+ +++TAFT+KK++GK  
Sbjct: 838 SISGIGWGWAGVIWIYSVIFYVPLDIIKFTVRYALSGEAWNLLFDRKTAFTSKKDYGKED 897

Query: 125 XXXXXXXXQRTLHGLRSAERKLFSERNTFGDISXXXXXXXXXXXXXXXXXLHTLKGKVES 184
                   QRT+ GL S+E ++   R+     S                 +HTL+G VES
Sbjct: 898 REAKWVLSQRTIQGLMSSELEINGRRS-----SLIAEQARRRAEIARLGEIHTLRGHVES 952

Query: 185 FAKLRGLDIDAINQHYTV 202
             +L+ LDI+ I   +TV
Sbjct: 953 VVRLKNLDINVIQAAHTV 970


>GSVIVT01019734001 assembled CDS
          Length = 1462

 Score =  157 bits (398), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 78/105 (74%), Positives = 89/105 (84%), Gaps = 2/105 (1%)

Query: 1    NELEEQLASAVYLQVSTISQALIFVTRSRSWSF--RERPGLLLFNAFIVAQLIATVISAI 58
            + L  QLASAVYLQV+TISQALIFVTRSR WSF  RERP L L +AF+  QL ATVISA 
Sbjct: 1358 DHLHAQLASAVYLQVNTISQALIFVTRSRGWSFMQRERPRLRLVSAFVSIQLAATVISAT 1417

Query: 59   ATWKFAGIRSIGWGWTGVIWLYNMLTYLLLDPIKFAVRYALSGKA 103
            A+ +FAGI+ IGWGWTGVIWLYN+LTY+LLDPIKF V+YALSG+A
Sbjct: 1418 ASLEFAGIKKIGWGWTGVIWLYNILTYMLLDPIKFGVQYALSGRA 1462


>GSVIVT01019738001 assembled CDS
          Length = 152

 Score =  150 bits (378), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 78/106 (73%), Positives = 86/106 (81%), Gaps = 3/106 (2%)

Query: 1   NELEEQLASAVYLQ-VSTISQALIFVTRSRSWSF--RERPGLLLFNAFIVAQLIATVISA 57
           + L   LASAVYLQ VSTISQALI VTRSR WSF  RERP   L +AF+  QL  TVISA
Sbjct: 47  DHLHALLASAVYLQAVSTISQALICVTRSRGWSFMQRERPRPRLVSAFVGIQLAPTVISA 106

Query: 58  IATWKFAGIRSIGWGWTGVIWLYNMLTYLLLDPIKFAVRYALSGKA 103
            A+W+FAGIR IGWGWTGVIWLYN+LTY+LLDPIKF VRYALSG+A
Sbjct: 107 TASWEFAGIRKIGWGWTGVIWLYNILTYMLLDPIKFGVRYALSGRA 152