Jatropha Genome Database

JcCA0118761.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0118761.10 - phase: 2 /pseudo/partial
         (192 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01009880001 assembled CDS                                       336   4e-93
GSVIVT01025206001 assembled CDS                                       322   5e-89
GSVIVT01025695001 assembled CDS                                       305   8e-84
GSVIVT01033934001 assembled CDS                                       295   8e-81
GSVIVT01008688001 assembled CDS                                       281   1e-76
GSVIVT01023920001 assembled CDS                                       277   2e-75
GSVIVT01035377001 assembled CDS                                       264   2e-71
GSVIVT01032119001 assembled CDS                                       262   8e-71
GSVIVT01033302001 assembled CDS                                       260   3e-70
GSVIVT01025449001 assembled CDS                                       247   3e-66
GSVIVT01023515001 assembled CDS                                        99   1e-21

>GSVIVT01009880001 assembled CDS
          Length = 216

 Score =  336 bits (861), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 164/179 (91%), Positives = 169/179 (94%)

Query: 14  VERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGEPVGEVRAVSDMHQ 73
           VER IDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGE VGEVRAVS MHQ
Sbjct: 38  VERKIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGETVGEVRAVSGMHQ 97

Query: 74  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA 133
           RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA
Sbjct: 98  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA 157

Query: 134 VDEGFITPSARHIIVSAPTAQELMSKLEEYEPRHSGVASKLTWEMEQQLGYTIKSEIAR 192
           VDEGFIT +AR IIVSAPTAQEL+ KLEEY P+HSGVA KL+WEMEQQLGY  KS+IAR
Sbjct: 158 VDEGFITAAARQIIVSAPTAQELLCKLEEYVPKHSGVAPKLSWEMEQQLGYATKSDIAR 216


>GSVIVT01025206001 assembled CDS
          Length = 212

 Score =  322 bits (826), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 156/179 (87%), Positives = 168/179 (93%), Gaps = 1/179 (0%)

Query: 14  VERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGEPVGEVRAVSDMHQ 73
           V RNIDLVYGGGSIGLMGL+SQAVYDGGRHV+GVIPKTLMPREITGE VGEV+AV+DMHQ
Sbjct: 35  VSRNIDLVYGGGSIGLMGLISQAVYDGGRHVIGVIPKTLMPREITGETVGEVKAVADMHQ 94

Query: 74  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA 133
           RKAEMAR +DAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA
Sbjct: 95  RKAEMARHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA 154

Query: 134 VDEGFITPSARHIIVSAPTAQELMSKLEEYEPRHSGVASKLTWEMEQQLGYTIKSEIAR 192
           V+E FI+PSARHIIVSAPTA+ELM KLEEY PRH GVASKL+WE E QLGY+ K E++R
Sbjct: 155 VEEDFISPSARHIIVSAPTARELMKKLEEYFPRHEGVASKLSWETE-QLGYSPKCELSR 212


>GSVIVT01025695001 assembled CDS
          Length = 218

 Score =  305 bits (781), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 145/167 (86%), Positives = 158/167 (94%)

Query: 14  VERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGEPVGEVRAVSDMHQ 73
           V RNIDLVYGGGSIGLMGLVSQAV++GGRHV+GVIPKTLMPRE+TG  VGEV+AV+DMHQ
Sbjct: 41  VSRNIDLVYGGGSIGLMGLVSQAVHNGGRHVIGVIPKTLMPRELTGVTVGEVKAVADMHQ 100

Query: 74  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA 133
           RKAEMA+ +DAFIALPGGYGTLEELLEVI WAQLGIHDKPVGLLNVDGYYNSLLSFIDKA
Sbjct: 101 RKAEMAKHSDAFIALPGGYGTLEELLEVIAWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA 160

Query: 134 VDEGFITPSARHIIVSAPTAQELMSKLEEYEPRHSGVASKLTWEMEQ 180
           V+EGFI+PSARHIIVSAPTA+EL+ KLEEY P H GVASKL+WEMEQ
Sbjct: 161 VEEGFISPSARHIIVSAPTAEELVKKLEEYVPSHQGVASKLSWEMEQ 207


>GSVIVT01033934001 assembled CDS
          Length = 216

 Score =  295 bits (756), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 143/171 (83%), Positives = 155/171 (90%)

Query: 14  VERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGEPVGEVRAVSDMHQ 73
           VER IDLVYGGGS+GLMGLVSQAV+DGGRHVLGVIP+TLMPREITGE VGEVRAVS MH+
Sbjct: 37  VERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPRTLMPREITGETVGEVRAVSHMHE 96

Query: 74  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA 133
           RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIH KPVGLLNVDGYYNSLLSFIDKA
Sbjct: 97  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHKKPVGLLNVDGYYNSLLSFIDKA 156

Query: 134 VDEGFITPSARHIIVSAPTAQELMSKLEEYEPRHSGVASKLTWEMEQQLGY 184
           VDEGF++P+AR IIVSAPTA+EL+ +LEEY P H  V SKL WE  + + Y
Sbjct: 157 VDEGFVSPTARRIIVSAPTAKELVRELEEYVPEHDEVTSKLIWEEVEIISY 207


>GSVIVT01008688001 assembled CDS
          Length = 214

 Score =  281 bits (720), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 137/180 (76%), Positives = 154/180 (85%), Gaps = 1/180 (0%)

Query: 14  VERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGEPVGEVRAVSDMHQ 73
           V R +DLVYGGGS+GLMGLVSQ V+ GG HVLG+IPKTLM +EITGE VGEVR V+DMHQ
Sbjct: 35  VSRRLDLVYGGGSVGLMGLVSQEVHRGGGHVLGIIPKTLMCKEITGETVGEVRPVADMHQ 94

Query: 74  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA 133
           RKAEMAR +D FIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYN LL+FIDKA
Sbjct: 95  RKAEMARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKA 154

Query: 134 VDEGFITPSARHIIVSAPTAQELMSKLEEYEPRHSGVASKLTWEMEQ-QLGYTIKSEIAR 192
           VD+GFI PS RHIIVSAP A+EL+ KLEEY P H GV +K  WE EQ +L  +++ +IAR
Sbjct: 155 VDDGFIKPSQRHIIVSAPNARELVQKLEEYVPVHDGVVAKARWEAEQLELNASLQIDIAR 214


>GSVIVT01023920001 assembled CDS
          Length = 229

 Score =  277 bits (709), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 133/166 (80%), Positives = 146/166 (87%)

Query: 14  VERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGEPVGEVRAVSDMHQ 73
           V R +DLVYGGGSIGLMGLVSQAV+ GG HVLG+IP+TLM +EITGE VGEVR V+DMHQ
Sbjct: 39  VARRLDLVYGGGSIGLMGLVSQAVHRGGGHVLGIIPRTLMCKEITGETVGEVRPVADMHQ 98

Query: 74  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA 133
           RKAEMAR +D FIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYN LL+FIDKA
Sbjct: 99  RKAEMARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKA 158

Query: 134 VDEGFITPSARHIIVSAPTAQELMSKLEEYEPRHSGVASKLTWEME 179
           VD+GFI PS RHIIVSAP A+EL+ KLEEY P H GV +K  WE+E
Sbjct: 159 VDDGFIKPSQRHIIVSAPNAKELVQKLEEYVPVHDGVIAKARWEVE 204


>GSVIVT01035377001 assembled CDS
          Length = 217

 Score =  264 bits (675), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 124/171 (72%), Positives = 145/171 (84%)

Query: 14  VERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGEPVGEVRAVSDMHQ 73
           V+R I+LVYGGGS+GLMGL+SQ VYDG  HVLGVIP+ LMP EI+G+ VGEVR VSDMH+
Sbjct: 40  VKRKINLVYGGGSVGLMGLISQTVYDGDCHVLGVIPRALMPLEISGQTVGEVRIVSDMHE 99

Query: 74  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA 133
           RKAEMA++ADAFIALPGGYGT+EELLE+ITW+QLGIH KPVGLLNVDGYYN LL+  D  
Sbjct: 100 RKAEMAQEADAFIALPGGYGTMEELLEMITWSQLGIHKKPVGLLNVDGYYNFLLALFDNG 159

Query: 134 VDEGFITPSARHIIVSAPTAQELMSKLEEYEPRHSGVASKLTWEMEQQLGY 184
           V EGFI P ARHI+VSAPTA+EL+ K+E+Y P H  VAS  +W+MEQQ  Y
Sbjct: 160 VKEGFIKPGARHIVVSAPTAKELLVKMEQYTPAHEHVASHESWQMEQQGEY 210


>GSVIVT01032119001 assembled CDS
          Length = 215

 Score =  262 bits (669), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 120/169 (71%), Positives = 147/169 (86%)

Query: 14  VERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGEPVGEVRAVSDMHQ 73
           VER IDLVYGGGS+GLMGL+SQ V++GG HVLGVIP+ L+P EI+GE +GEV+ V+DMHQ
Sbjct: 47  VERKIDLVYGGGSVGLMGLISQTVFNGGCHVLGVIPRALLPHEISGETIGEVKTVADMHQ 106

Query: 74  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA 133
           RK+EMA+ ADAFIALPGGYGT+EELLE+ITW+QLGIH+KPVGLLNVDGYYNSLL+  DK 
Sbjct: 107 RKSEMAKNADAFIALPGGYGTMEELLEMITWSQLGIHEKPVGLLNVDGYYNSLLTLFDKG 166

Query: 134 VDEGFITPSARHIIVSAPTAQELMSKLEEYEPRHSGVASKLTWEMEQQL 182
           V+EGFI  SAR+I++SA TA+EL+ K+EEY P H  VA + TWE++Q L
Sbjct: 167 VEEGFIEDSARNIMISATTAEELIKKMEEYAPVHDRVAPRQTWEVDQLL 215


>GSVIVT01033302001 assembled CDS
          Length = 222

 Score =  260 bits (664), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 120/170 (70%), Positives = 143/170 (84%)

Query: 14  VERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGEPVGEVRAVSDMHQ 73
           VERNIDLVYGGGS GLMGL+S+ V DGGRHVLG+IPK LMP EITG+ +G+++ VS MH+
Sbjct: 45  VERNIDLVYGGGSKGLMGLISKTVLDGGRHVLGIIPKALMPYEITGKTIGDIKIVSSMHE 104

Query: 74  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA 133
           RK+EMA++ADAFIALPGGYGT+EELLE++TW+QLGIH KPVGLLNVDGY+NSL+   DK 
Sbjct: 105 RKSEMAKRADAFIALPGGYGTMEELLEMVTWSQLGIHGKPVGLLNVDGYFNSLIELFDKG 164

Query: 134 VDEGFITPSARHIIVSAPTAQELMSKLEEYEPRHSGVASKLTWEMEQQLG 183
           V+EGFI  S RHIIVSA TA+ELM K+EEY P H  V S+ +WE EQ  G
Sbjct: 165 VEEGFIVDSERHIIVSADTAEELMKKMEEYAPVHDAVTSRRSWEEEQSSG 214


>GSVIVT01025449001 assembled CDS
          Length = 205

 Score =  247 bits (630), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 118/164 (71%), Positives = 136/164 (82%)

Query: 14  VERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGEPVGEVRAVSDMHQ 73
           VER +DL+YGGGS+GLMGLVSQ VYDGG HVLGVIP+ L+P EI+G  VG+V  VSDMH+
Sbjct: 33  VERRMDLIYGGGSVGLMGLVSQKVYDGGCHVLGVIPRALVPIEISGHAVGQVVIVSDMHE 92

Query: 74  RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA 133
           RKAEMA +ADAFIALPGGYGT+EELLEVI WAQLGIHDKPVGLLNVDGYY+ LL   DK 
Sbjct: 93  RKAEMASRADAFIALPGGYGTMEELLEVIAWAQLGIHDKPVGLLNVDGYYDCLLGLFDKG 152

Query: 134 VDEGFITPSARHIIVSAPTAQELMSKLEEYEPRHSGVASKLTWE 177
           V+EGFI PSAR I+VSA TA+EL+ K+E+Y P H  VA   +W 
Sbjct: 153 VEEGFIKPSARSIVVSAKTARELIQKMEDYIPFHDQVAPTQSWN 196


>GSVIVT01023515001 assembled CDS
          Length = 80

 Score = 98.6 bits (244), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 54/69 (78%)

Query: 113 PVGLLNVDGYYNSLLSFIDKAVDEGFITPSARHIIVSAPTAQELMSKLEEYEPRHSGVAS 172
           P+G LNVDGYYN LL+FIDKAVD+GFI PS RHIIVSAP A++L+ KLEEY   H  V +
Sbjct: 12  PIGFLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIIVSAPNAKKLVQKLEEYVLVHDRVIA 71

Query: 173 KLTWEMEQQ 181
           K   E+EQQ
Sbjct: 72  KARQEVEQQ 80