Jatropha Genome Database

JcCA0111501.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0111501.10 - phase: 1 /partial
         (333 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01018625001 assembled CDS                                       518   e-147
GSVIVT01001272001 assembled CDS                                       405   e-113
GSVIVT01016869001 assembled CDS                                       330   8e-91
GSVIVT01033873001 assembled CDS                                       254   5e-68
GSVIVT01035390001 assembled CDS                                       240   8e-64
GSVIVT01035389001 assembled CDS                                       229   2e-60
GSVIVT01006154001 assembled CDS                                       226   9e-60
GSVIVT01024570001 assembled CDS                                       127   6e-30

>GSVIVT01018625001 assembled CDS
          Length = 542

 Score =  518 bits (1335), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 244/333 (73%), Positives = 286/333 (85%), Gaps = 1/333 (0%)

Query: 1   PLFHLGWYHLFYQYNPDSAVWGNITWGHAVSKDLIHWLYLPLAMVPDKWYDINGVWTGSA 60
           PLFH+GWYHLFYQYNPDSAVWGNITWGHAVS+D+IHWLYLPLAMVPD+W+D+NGVWTGSA
Sbjct: 29  PLFHMGWYHLFYQYNPDSAVWGNITWGHAVSRDMIHWLYLPLAMVPDRWFDLNGVWTGSA 88

Query: 61  TLLPDGQIMMLYTGDTNASVQVQNLAYPANLSDPLLLDWVKYXXXXXXXXXXXXXXSEFR 120
           T+LP+GQI+MLYTGDTN SVQVQNLAYPANLSDPLLL W+KY               +FR
Sbjct: 89  TILPNGQIIMLYTGDTNDSVQVQNLAYPANLSDPLLLHWIKYENNPVMVPPAGIGSDDFR 148

Query: 121 DPTTGWLGPDGKWRIAIGSRVNKTIGVSLVYQTTNFTTYEKLEGVLHAVPGTGMWECVDF 180
           DPTT W+G DG WR+A+GS VN T G+ LV+QTTNFT +E L+G LH VPGTGMWECVDF
Sbjct: 149 DPTTMWVGADGNWRVAVGSLVNTT-GIVLVFQTTNFTDFELLDGELHGVPGTGMWECVDF 207

Query: 181 YPVAINGSVGLDTSANGLGTKHVLKASLDNTKVDHYALGTYDPITDTWTPDNPKEDVGIG 240
           YPV+ING  GLDTSA+G G KHVLKAS+D+ + D+YALG YDP+TDTWTPD+P+ DVGIG
Sbjct: 208 YPVSINGVYGLDTSAHGPGIKHVLKASMDDNRHDYYALGEYDPMTDTWTPDDPELDVGIG 267

Query: 241 LRVDYGRYYASKTFYDQHKERRILWGWINETDTEEDDLDKGWASVQTIPRAVLFDNKTGT 300
           LR+DYG+YYASKTFYDQ K+RRIL+GWI+E D E DDL KGWAS+Q+IPR VL DNKTGT
Sbjct: 268 LRLDYGKYYASKTFYDQVKKRRILYGWISEGDIESDDLKKGWASLQSIPRTVLHDNKTGT 327

Query: 301 NLLQWPVEEIESLRLNSTDFEEIVVGPGSIVPL 333
            LL WP+EE+ESLR NST+FE++++ PGS+VPL
Sbjct: 328 YLLLWPIEEVESLRTNSTEFEDVLLEPGSVVPL 360


>GSVIVT01001272001 assembled CDS
          Length = 471

 Score =  405 bits (1040), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 199/290 (68%), Positives = 229/290 (78%), Gaps = 1/290 (0%)

Query: 44  MVPDKWYDINGVWTGSATLLPDGQIMMLYTGDTNASVQVQNLAYPANLSDPLLLDWVKYX 103
           MV D+WYD NGVWTGSATLL DGQ++MLYTG TN SVQVQNLAYPA+LSDPLL+DWVKY 
Sbjct: 1   MVADQWYDTNGVWTGSATLLSDGQVIMLYTGATNESVQVQNLAYPADLSDPLLVDWVKYP 60

Query: 104 XXXXXXXXXXXXXSEFRDPTTGWLGPDGKWRIAIGSRVNKTIGVSLVYQTTNFTTYEKLE 163
                         +FRDPTT W  PDGKWRIAIGS+VNKT G+SLVY T +F  YE +E
Sbjct: 61  GNPVLVPPPGIDDRDFRDPTTAWYWPDGKWRIAIGSKVNKT-GISLVYNTEDFKKYELIE 119

Query: 164 GVLHAVPGTGMWECVDFYPVAINGSVGLDTSANGLGTKHVLKASLDNTKVDHYALGTYDP 223
           GVLHAVPGTGMWECVD YPV++    GLDTS NG G KHVLKASLD+ K D+YA+GTY  
Sbjct: 120 GVLHAVPGTGMWECVDLYPVSLKEDNGLDTSFNGPGVKHVLKASLDDDKNDYYAIGTYSL 179

Query: 224 ITDTWTPDNPKEDVGIGLRVDYGRYYASKTFYDQHKERRILWGWINETDTEEDDLDKGWA 283
            +  WTPDN   DVGIGLR DYG++YASKTFYDQ+K+RRILWGWI ETD E  D+ KGWA
Sbjct: 180 ESGNWTPDNSNLDVGIGLRYDYGKFYASKTFYDQNKQRRILWGWIGETDGESADIKKGWA 239

Query: 284 SVQTIPRAVLFDNKTGTNLLQWPVEEIESLRLNSTDFEEIVVGPGSIVPL 333
           SVQ+IPR V+FD KTGTN+LQWPV EI+SLR +S  F+++ VGPGS+V L
Sbjct: 240 SVQSIPRTVVFDKKTGTNILQWPVAEIKSLRKSSKKFDKLEVGPGSVVTL 289


>GSVIVT01016869001 assembled CDS
          Length = 574

 Score =  330 bits (845), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 162/335 (48%), Positives = 217/335 (64%), Gaps = 4/335 (1%)

Query: 1   PLFHLGWYHLFYQYNPDSAVWGNITWGHAVSKDLIHWLYLPLAMVPDKWYDINGVWTGSA 60
           P+ + G YH FYQYNP  AVWGNI W H+ S DL++W     A+ P +  DING W+GSA
Sbjct: 66  PMIYKGLYHFFYQYNPHGAVWGNIVWAHSTSTDLVNWTPHKYAISPSQPADINGCWSGSA 125

Query: 61  TLLPDGQIMMLYTGDTNASVQVQNLAYPANLSDPLLLDWVKYXXX--XXXXXXXXXXXSE 118
           T+LP+G+ ++LYTG    + QVQN+A P NLSDP LL+W K                 S 
Sbjct: 126 TILPNGKPVILYTGIDPQNKQVQNMAVPKNLSDPFLLEWTKLPQNPLMEPTTINSINASS 185

Query: 119 FRDPTTGWLGPDGKWRIAIGSRVNKTIGVSLVYQTTNFTTYEKLEGVLHAVPGTGMWECV 178
           FRDPTT W G DG+WR+ IGS++ +  G++++Y++ +F  + K +  LH+   TGMWEC 
Sbjct: 186 FRDPTTAWQGTDGRWRVIIGSKIKRK-GLAILYRSKDFVRWTKAQHPLHSGKNTGMWECP 244

Query: 179 DFYPVAINGSVGLDTSANGLGTKHVLKASLDNTKVDHYALGTYDPITDTWTPDNPKEDVG 238
           DF+PV+IN S G+DTS+     K+VLK SLD+TK D+Y +G+Y+   DT+ PD    D  
Sbjct: 245 DFFPVSINSSTGVDTSSISKTLKYVLKLSLDDTKHDYYTIGSYNREKDTYVPDKGSVDND 304

Query: 239 IGLRVDYGRYYASKTFYDQHKERRILWGWINETDTEEDDLDKGWASVQTIPRAVLFDNKT 298
            GLR DYG++YASKTF+D  K RRILWGWINE+ + E D++KGW+ VQ IPR V  D K+
Sbjct: 305 SGLRYDYGKFYASKTFFDNAKNRRILWGWINESSSVEHDIEKGWSGVQAIPRNVWLD-KS 363

Query: 299 GTNLLQWPVEEIESLRLNSTDFEEIVVGPGSIVPL 333
           G  LLQWP+ EIE  R+         +  GS V +
Sbjct: 364 GKQLLQWPIAEIEKQRIKPGHMSSRELKGGSKVEV 398


>GSVIVT01033873001 assembled CDS
          Length = 529

 Score =  254 bits (648), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 139/314 (44%), Positives = 176/314 (56%), Gaps = 46/314 (14%)

Query: 1   PLFHLGWYHLFYQYNPDSAVWGNITWGHAVSKDLIHWLYLPLAMVPDKWYDINGVWTGSA 60
           P+++ G YHLFYQYNP  AVWGNI W H+VS++LI W  L  A+ P K +DING W+GSA
Sbjct: 67  PMYYNGIYHLFYQYNPKGAVWGNIVWAHSVSRNLIDWEALEPAIYPSKPFDINGCWSGSA 126

Query: 61  TLLPDGQIMMLYTGDTNASVQVQNLAYPANLSDPLLLDWVKYXXXXXXXXXXXXXXSEFR 120
           T+LP  +  +LYTG      QVQN+A+PANLSDP L  WVK               S FR
Sbjct: 127 TILPGNKPAILYTGIDTQQRQVQNIAFPANLSDPYLRKWVKPDSNPLVVPDVGMNASTFR 186

Query: 121 DPTTGWLGPDGKWRIAIGSRVNKTIGVSLVYQTTNFTTYEKLEGVLHAVPGTGMWECVDF 180
           DPTT W   +G WR+ +G+R                   +K  G+      TGMWEC DF
Sbjct: 187 DPTTAWR-VNGHWRMLVGAR-------------------KKHRGI-----NTGMWECPDF 221

Query: 181 YPVAINGSVGLDTSANGLGTKHVLKASLDNTKVDHYALGTYDPITDTWTPDNPKEDVGIG 240
           +PV++    GLDTS  G   +HVLK SLD T+ ++Y +G Y P  D + P N   D   G
Sbjct: 222 FPVSLYSERGLDTSVTGKNVRHVLKVSLDRTRYEYYTIGRYYPEIDRYIPGNTSADGWSG 281

Query: 241 LRVDYGRYYASKTFYDQHKERRILWGWINETDTEEDDLDKGWASVQTIPRAVLFDNKTGT 300
           L                    RILWGW NE+DT ++D  KGWA +QTIPR +  D K   
Sbjct: 282 L--------------------RILWGWANESDTADNDTAKGWAGIQTIPRTLWLD-KGKK 320

Query: 301 NLLQWPVEEIESLR 314
            LLQWP+EE+ +LR
Sbjct: 321 QLLQWPIEELNTLR 334


>GSVIVT01035390001 assembled CDS
          Length = 508

 Score =  240 bits (612), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 133/331 (40%), Positives = 179/331 (54%), Gaps = 69/331 (20%)

Query: 1   PLFHLGWYHLFYQYNPDSAVWGNITWGHAVSKDLIHWLYLPLAMVPDKWYDINGVWTGSA 60
           P+++ G YHLFYQYNP +AVWGNITW H++S DL++W++L  A+ P   +DING WTGSA
Sbjct: 57  PMYYNGVYHLFYQYNPYAAVWGNITWAHSISYDLVNWVHLDHALNPTDPFDINGCWTGSA 116

Query: 61  TLLPDGQIMMLYTGDTNASVQVQNLAYPANLSDPLLLDWVKYXXXXXXXXXXXXXXSEFR 120
           T+LP  + +++YTG    + QVQN+A P N+SDPLL +W+K               + FR
Sbjct: 117 TILPGEEPVIIYTGADTQNRQVQNMAVPKNISDPLLREWIKSPRNPLMSPTNGIDANNFR 176

Query: 121 DPTTGWLGPDGKWRIAIGSRVNKTIGVSLVYQTTNFTTYEKLEGVLHAVPGTGMWECVDF 180
           DPTT W GPD  WRI              + QT            LH+   TGMWEC DF
Sbjct: 177 DPTTAWQGPDKVWRI--------------ISQTP-----------LHSSNKTGMWECPDF 211

Query: 181 YPVAINGSVGLDTSANGLGTKHVLKASLDNTKVDHYALGTYDPITDTWTPDNPKEDVGIG 240
           YPV+     G++TS     T+HVLKAS +    D+Y +G Y                   
Sbjct: 212 YPVSTR--TGVETSVQNADTQHVLKASFNGN--DYYIIGKY------------------- 248

Query: 241 LRVDYGRYYASKTFYDQHKERRILWGWINETDTEEDDLDKGWASVQTIPRAVLFDNKTGT 300
                               RRILW WI E+D+   D++KGW+ +Q+IPR+VL D +TG 
Sbjct: 249 --------------------RRILWAWIQESDSSSADIEKGWSGLQSIPRSVLLD-QTGR 287

Query: 301 NLLQWPVEEIESLRLNSTDFEEIVVGPGSIV 331
            L+QWP++EIE LR N        V  GS++
Sbjct: 288 QLVQWPIKEIEELRENQVTLLNKEVRGGSVL 318


>GSVIVT01035389001 assembled CDS
          Length = 539

 Score =  229 bits (583), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 130/333 (39%), Positives = 175/333 (52%), Gaps = 70/333 (21%)

Query: 1   PLFHLGWYHLFYQYNPDSAVWGNITWGHAVSKDLIHWLYLPLAMVPDKWYDINGVWTGSA 60
           P+++ G YHLFYQYNP +AVWGNITW H+ S DL++W++L LA+ P   +DING W+GSA
Sbjct: 97  PMYYNGVYHLFYQYNPYAAVWGNITWAHSTSYDLVNWVHLELAIKPTDPFDINGCWSGSA 156

Query: 61  TLLPDGQIMMLYTGDTNASVQVQNLAYPANLSDPLLLDWVKYXXXXXXXXXXXXXXSEFR 120
           T+L   + +++YTG  + + QVQNL+ P N+SDPLL +W+K               S FR
Sbjct: 157 TILTGEEPVIIYTGKDSQNRQVQNLSVPKNISDPLLREWIKSPHNPLMTPIDGIDASNFR 216

Query: 121 DPTTGWLGPDGKWRIAIGSRVNKTIGVSLVYQTTNFTTYEKLEGVLHAVPGTGMWECVDF 180
           DPTT W G D  WRI              + QT            LH+   TGMWEC DF
Sbjct: 217 DPTTAWQGSDKVWRI--------------LSQTP-----------LHSSNKTGMWECPDF 251

Query: 181 YPVAINGSVGLDTSANGLGTKHVLKASLDNTKVDHYALGTYDPITDTWTPDNPKEDVGIG 240
           YPV+I+   G++TS     T+HVLKAS +    D+Y +G Y                   
Sbjct: 252 YPVSISSRNGVETSVQNAETRHVLKASFNGN--DYYIMGKY------------------- 290

Query: 241 LRVDYGRYYASKTFYDQHKERRILWGWINETDTEEDDLDKGWASVQTIPRAVLFDNKTGT 300
                               RRILW WI E D    D +KGW+ +Q+ PR+VL D + G 
Sbjct: 291 --------------------RRILWAWIQEAD---KDTEKGWSGLQSFPRSVLLD-QNGQ 326

Query: 301 NLLQWPVEEIESLRLNSTDFEEIVVGPGSIVPL 333
            L+QWPV+EI  L  N   F    +  GS++ +
Sbjct: 327 RLVQWPVKEIAILHKNQVTFHNKELRGGSVIEV 359


>GSVIVT01006154001 assembled CDS
          Length = 170

 Score =  226 bits (577), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 117/185 (63%), Positives = 131/185 (70%), Gaps = 38/185 (20%)

Query: 1   PLFHLGWYHLFYQYNPDSAVWGNITWGHAVSKDLIHWLYLPLAMVPDKWYDINGVWTGSA 60
           P+F+ GWYH FYQYNPD+AVWGNI WGHAVSKDLI WL+LPLAMV D+WYD NGVWTGSA
Sbjct: 24  PMFYGGWYHFFYQYNPDAAVWGNIVWGHAVSKDLIEWLHLPLAMVADQWYDTNGVWTGSA 83

Query: 61  TLLPDGQIMMLYTGDTNASVQVQNLAYPANLSDPLLLDWVKYXXXXXXXXXXXXXXSEFR 120
           TLL DGQ++MLYTG TN SVQVQNLAYPA+LSDPLL+DWVKY                  
Sbjct: 84  TLLSDGQVIMLYTGATNESVQVQNLAYPADLSDPLLVDWVKY------------------ 125

Query: 121 DPTTGWLGPDGKWRIAIGSRVNKTIGVSLVYQTTNFTTYEKLEGVLHAVPGTGMWECVDF 180
                               VNKT G+SLVY T +F  YE +EGVLHAVPGTGMWECVD 
Sbjct: 126 -------------------PVNKT-GISLVYNTEDFKKYELIEGVLHAVPGTGMWECVDL 165

Query: 181 YPVAI 185
           YPV++
Sbjct: 166 YPVSL 170


>GSVIVT01024570001 assembled CDS
          Length = 191

 Score =  127 bits (320), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 96/175 (54%), Gaps = 1/175 (0%)

Query: 10  LFYQYNPDSAVWGNITWGHAVSKDLIHWLYLPLAMVPDKWYDINGVWTGSATLLPDGQIM 69
           + Y YN   AVWGNITW H++S  L+ W+ L  A+ P    DING WTGSAT+LP  + +
Sbjct: 1   MLYHYNFYVAVWGNITWAHSISYVLVKWVNLGHALNPTDPCDINGCWTGSATILPGEEPV 60

Query: 70  MLYTGDTNASVQVQNLAYPANLSDPLLLDWVKYXXXXXXXXXXXXXXSEFRDPTTGWLGP 129
           ++Y G      Q QN A   N+SDPL  +W+K               S F++P T W   
Sbjct: 61  IIYIGVDTEIRQFQNRALAKNISDPLHREWMKSPHNPIMTPIDGIDASNFKNPITAWQAL 120

Query: 130 DGKWRIAIGSRVNKTIGVSLVYQTTNFTTYEKLEGVLHAVPGTGMWECVDFYPVA 184
              WRI  GS  N   G +L +++ +F  + K + +LH+   TGMWEC +FY ++
Sbjct: 121 LKVWRILDGSLRNGH-GTTLFFRSKDFVNWNKSQTLLHSSNKTGMWECANFYSLS 174