Jatropha Genome Database
- JcCA0097961.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0097961.10 + phase: 0 /partial
(411 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01018993001 assembled CDS 522 e-148
GSVIVT01007437001 assembled CDS 427 e-120
GSVIVT01002095001 assembled CDS 191 6e-49
GSVIVT01027871001 assembled CDS 96 3e-20
GSVIVT01013670001 assembled CDS 66 3e-11
GSVIVT01018991001 assembled CDS 65 4e-11
GSVIVT01027917001 assembled CDS 60 1e-09
GSVIVT01024759001 assembled CDS 60 2e-09
GSVIVT01022281001 assembled CDS 60 2e-09
GSVIVT01023998001 assembled CDS 59 5e-09
GSVIVT01012784001 assembled CDS 55 6e-08
GSVIVT01022600001 assembled CDS 53 2e-07
GSVIVT01001672001 assembled CDS 53 3e-07
GSVIVT01014729001 assembled CDS 52 4e-07
GSVIVT01033724001 assembled CDS 51 8e-07
GSVIVT01032402001 assembled CDS 49 4e-06
GSVIVT01011013001 assembled CDS 48 7e-06
>GSVIVT01018993001 assembled CDS
Length = 393
Score = 522 bits (1344), Expect = e-148, Method: Compositional matrix adjust.
Identities = 257/266 (96%), Positives = 260/266 (97%), Gaps = 1/266 (0%)
Query: 145 QIPGTNPAISGMFPNMFPLGTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQS 204
QIPGT P I GMFPNMFPL +GQ FGALPVMPVQAMTQQATRHARRVYVGGL PTANEQS
Sbjct: 16 QIPGTTPTIPGMFPNMFPLASGQ-FGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQS 74
Query: 205 VATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 264
VATFFSQVM+AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP
Sbjct: 75 VATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 134
Query: 265 VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 324
VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ
Sbjct: 135 VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 194
Query: 325 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 384
IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR
Sbjct: 195 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 254
Query: 385 ANQGANQPKPEQENVLLHAQQQIALQ 410
ANQGA+QPKPEQENVLLHAQQQIALQ
Sbjct: 255 ANQGASQPKPEQENVLLHAQQQIALQ 280
>GSVIVT01007437001 assembled CDS
Length = 412
Score = 427 bits (1097), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/267 (78%), Positives = 229/267 (85%), Gaps = 2/267 (0%)
Query: 145 QIPGTNPAISGMFPNMFPLGTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQS 204
++PG + GM NMFP G Q GALP+MPVQAMTQQATRHARRVYVGGLPP ANEQ+
Sbjct: 106 ELPGVPQMVPGMIQNMFPFG-ATQLGALPLMPVQAMTQQATRHARRVYVGGLPPLANEQT 164
Query: 205 VATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 264
+ATFFSQVM AIGGN+AGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGI+FE
Sbjct: 165 IATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIMFEACL 224
Query: 265 VKV-RRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEA 323
+ P+DYNPSLAA LGPSQP+P+LNLAAVGL PG GG EGPDRIFVGGLPYYFTE
Sbjct: 225 TLIFSLPTDYNPSLAAALGPSQPSPHLNLAAVGLMPGVIGGAEGPDRIFVGGLPYYFTEE 284
Query: 324 QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVR 383
QIRELLESFGPLRGFDLVKDR+TGNSKGY FCVYQD +VTDIACAALNG+KMGDKTLTVR
Sbjct: 285 QIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDIACAALNGLKMGDKTLTVR 344
Query: 384 RANQGANQPKPEQENVLLHAQQQIALQ 410
RA G+ Q K EQ+N+L AQQ IA+Q
Sbjct: 345 RATVGSGQAKSEQDNILAQAQQHIAIQ 371
>GSVIVT01002095001 assembled CDS
Length = 6467
Score = 191 bits (485), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 90/113 (79%), Positives = 97/113 (85%)
Query: 298 TPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVY 357
T GG EGPDRIFVGGLPYYFTE QIRELLESFGPLRGFDLVKDR+TGNSKGY FCVY
Sbjct: 6227 TDSVIGGAEGPDRIFVGGLPYYFTEEQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVY 6286
Query: 358 QDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQENVLLHAQQQIALQ 410
QD +VTDIACAALNG+KMGDKTLTVRRA G+ Q K EQ+N+L AQQ IA+Q
Sbjct: 6287 QDPAVTDIACAALNGLKMGDKTLTVRRATVGSGQAKSEQDNILAQAQQHIAIQ 6339
>GSVIVT01027871001 assembled CDS
Length = 882
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 108/205 (52%), Gaps = 16/205 (7%)
Query: 183 QATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVE 242
QATR RR+YV LP +++E+++ + + + G N ++ I+ EK A VE
Sbjct: 397 QATRPMRRLYVENLPVSSSEKALMECLNNFLLSSGINHVQGTPPCISCIIHKEKGQALVE 456
Query: 243 MRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSA 302
+ E+AS A++ DGI F G+ +K+RRP D+ G + L A P +
Sbjct: 457 FLTPEDASAALSFDGISFSGSILKIRRPKDF----VDMTGVQE-----KLVAA---PDAI 504
Query: 303 GGL--EGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 360
+ + P +IF+GG+ + + E+ +FGPL+ + + + G + AF Y D
Sbjct: 505 SDIVKDSPHKIFIGGISRALSSDMLMEIAAAFGPLKAYRFQVNEDLG--EPCAFLEYVDQ 562
Query: 361 SVTDIACAALNGIKMGDKTLTVRRA 385
SVT ACA LNG+K+G + LTV +A
Sbjct: 563 SVTLKACAGLNGMKLGGQVLTVVQA 587
>GSVIVT01013670001 assembled CDS
Length = 562
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%)
Query: 311 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 370
+FVG +PY TE Q+ ++ E GP+ F LV DRETG KGY FC Y+D A L
Sbjct: 9 VFVGNIPYDATEEQLIQICEEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
Query: 371 NGIKMGDKTLTV 382
G ++ + L V
Sbjct: 69 QGYEINGRQLRV 80
>GSVIVT01018991001 assembled CDS
Length = 238
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 48/202 (23%)
Query: 192 YVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYI------NHEKKFAFVEMRS 245
YVG L P E+ + F Q AGP VVNVY+ N + + FVE RS
Sbjct: 28 YVGNLDPQVTEELLWELFVQ---------AGP---VVNVYVPKDRVTNLHQGYGFVEFRS 75
Query: 246 VEEASNAM-ALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGG 304
E+A A+ L+ I G P++V + S Q +L++ A
Sbjct: 76 EEDADYAIKVLNMIKLYGKPIRVNKAS-------------QDKKSLDVGA---------- 112
Query: 305 LEGPDRIFVGGLPYYFTEAQIRELLESFGPL-RGFDLVKDRETGNSKGYAFCVYQDLSVT 363
+FVG L E + + +FG + +++D +TGNS+G+ F Y +
Sbjct: 113 -----NLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEAS 167
Query: 364 DIACAALNGIKMGDKTLTVRRA 385
D A A+NG + ++ +TV A
Sbjct: 168 DAAIEAMNGQYLCNRQITVSYA 189
>GSVIVT01027917001 assembled CDS
Length = 283
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 39/201 (19%)
Query: 190 RVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE----KKFAFVEMRS 245
++Y G LP + + S +A I N P +V V N + + FAFV M S
Sbjct: 112 KLYFGNLPYSCD--------SAQLAGIIQNYGSP--ELVEVLYNRDTGRSRGFAFVTMSS 161
Query: 246 VEEASNAMA-LDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGG 304
VE+ + + LDG + G ++V SD +P P L L
Sbjct: 162 VEDCNAVIENLDGSEYGGRTLRVNF-SD------------KPKPKLPLYP---------- 198
Query: 305 LEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD 364
E ++FVG L + T + ++ + +G + G ++ D ETG S+GY F Y + D
Sbjct: 199 -ETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKAEMD 257
Query: 365 IACAALNGIKMGDKTLTVRRA 385
A +LNG+++ + + + A
Sbjct: 258 TALESLNGVELEGRAIRISLA 278
>GSVIVT01024759001 assembled CDS
Length = 375
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 311 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 370
+FVGG+P+ TE + + +G + +LV+D+ TG SKG+AF Y+D T++A L
Sbjct: 38 VFVGGIPFDLTEGDLLAVFSQYGEIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNL 97
Query: 371 NGIKM 375
NG ++
Sbjct: 98 NGAQI 102
>GSVIVT01022281001 assembled CDS
Length = 504
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 79/192 (41%), Gaps = 28/192 (14%)
Query: 186 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 245
R R V+ +P A E+ V FFS+ +++ K ++E
Sbjct: 129 RDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSRRSKGVGYIEFYD 182
Query: 246 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 305
A+AL G + G PV V+ PS A NL + +GG+
Sbjct: 183 AMSVPMAIALSGHLLHGQPVMVK------PSEAEK----------NLVQSNASGAVSGGI 226
Query: 306 EGP----DR-IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 360
GP DR ++VG L + TE Q+R++ E FG + L D ETG KG+ F + +L
Sbjct: 227 AGPYGAVDRKLYVGNLHFNMTELQLRQIFEPFGRVELVQLPLDLETGQCKGFGFVQFAEL 286
Query: 361 SVTDIACAALNG 372
A LNG
Sbjct: 287 EHAK-AAQNLNG 297
>GSVIVT01023998001 assembled CDS
Length = 427
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 28/203 (13%)
Query: 186 RHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 245
R R V+ + A+E+ V FFS+ +++ K ++E
Sbjct: 34 RDQRTVFAYQICLKADERDVYEFFSR------AGKVRDVRLIMDRNSRRSKGVGYIEFYD 87
Query: 246 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGL 305
A+AL G G PV V+ PS+ NL + + G GGL
Sbjct: 88 AMSVPMAIALSGQPLLGQPVMVK--------------PSEAEKNL-VQSTTAAAGGPGGL 132
Query: 306 EGP-----DRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL 360
GP R++VG L + TE Q+R++ E FG + L D ETG+ KG+ F + L
Sbjct: 133 IGPYSGGARRLYVGNLHFNITEDQLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARL 192
Query: 361 SVTDIACAALNG-IKMGDKTLTV 382
A +LNG + + +T+ V
Sbjct: 193 EDAR-AAQSLNGQLDIAGRTIKV 214
>GSVIVT01012784001 assembled CDS
Length = 242
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 310 RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAA 369
+IFVGGLP TE + ++ +G + +++D ET S+G+ F +++ V D +
Sbjct: 108 KIFVGGLPSTVTEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSE 167
Query: 370 LNGIKMGDKTLTVRRA 385
N I M + +++A
Sbjct: 168 GNMIDMAGTQVEIKKA 183
>GSVIVT01022600001 assembled CDS
Length = 198
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 16/168 (9%)
Query: 219 NTAGPGDAVVNVY---INHEKKFAFVEMRSVEEASNAMAL-DGIIFEGAPVKVRRPSDYN 274
N AG +V VY + + FAFV M SV+EA A+ + DG G VKV P
Sbjct: 11 NEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPR 70
Query: 275 PSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGP 334
A +GP + G ++ P +I+ G L + T +R+
Sbjct: 71 GGERAVMGPK------------IRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADHPG 118
Query: 335 LRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 382
L G ++ +RE+G S+G+ F + + A A+N +++ + L +
Sbjct: 119 LLGAKVIYERESGRSRGFGFLSFASAENAESALNAMNEVEVEGRPLRL 166
>GSVIVT01001672001 assembled CDS
Length = 153
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 310 RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAA 369
R F+GGL + ++ ++E E FG L +V D+ +G S+G+ F + D + A
Sbjct: 8 RCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQAMEDAIKE 67
Query: 370 LNGIKMGDKTLTVRRA--NQGA 389
++G+ + +++TV +A NQG+
Sbjct: 68 MHGMDLDGRSITVDKAQPNQGS 89
>GSVIVT01014729001 assembled CDS
Length = 293
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 310 RIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAA 369
+IFVGG+P TE + + +G + +++D ET S+G+ F ++ V D +
Sbjct: 108 KIFVGGVPSTVTEDEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISK 167
Query: 370 LNGIKMGDKTLTVRRAN-QGANQPKP 394
N I M + +++A + A+ P P
Sbjct: 168 GNMIDMAGTQVEIKKAEPKKASNPPP 193
>GSVIVT01033724001 assembled CDS
Length = 634
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 85/225 (37%), Gaps = 32/225 (14%)
Query: 177 VQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEK 236
++ M ARR +G + S+ Q M GN VV K
Sbjct: 83 IRVMWSHRDPDARRSGIGNVFVKNLSDSIDNVRLQAMFQKFGNILSC--KVVVTEDGKSK 140
Query: 237 KFAFVEMRSVEEASNAM-ALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV 295
+ FV+ S E A+ A+ L+G I +G + Y PNP+
Sbjct: 141 GYGFVQFESEEYANAAIEKLNGFIIDGKQI-------YAGKFVRKTDRVLPNPDAKYT-- 191
Query: 296 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFC 355
+++ L TE +RE FG + + KD E G S+G+ F
Sbjct: 192 --------------NLYIKNLDPDVTEEALREKFFEFGKIASLVISKD-ENGMSRGFGFV 236
Query: 356 VYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQENVL 400
++ A ALNG+++G K L V RA Q K E+E +L
Sbjct: 237 NFESPEDAKRALEALNGLQLGSKVLYVARA-----QKKAEREQLL 276
>GSVIVT01032402001 assembled CDS
Length = 281
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
Query: 271 SDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLE 330
+D S S+P+P+ G +PG +IF+GGL T AQ +
Sbjct: 15 NDVKSSHHTDDNDSKPHPH---TGDGASPG---------KIFIGGLARETTSAQFIKHFG 62
Query: 331 SFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD 364
+G + ++KDR+TG +G+ F Y DLSV D
Sbjct: 63 KYGEITDSVIMKDRKTGQPRGFGFVTYADLSVVD 96
>GSVIVT01011013001 assembled CDS
Length = 437
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 296 GLTPGSAGGLEGP--DRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYA 353
G S G +EGP +F+ +P F + ++ + FG + + D+ TG SK +
Sbjct: 336 GAGASSGGQVEGPPGANLFIYHIPQEFGDHELAHAFQQFGRVLSAKVFVDKATGASKCFG 395
Query: 354 FCVYQDLSVTDIACAALNGIKMGDKTLTV--RRANQGANQP 392
F Y + A + +NG ++G K L V +R N N+P
Sbjct: 396 FVSYDSPASAQSAISMMNGCQLGGKKLKVQLKRDNNKQNKP 436