Jatropha Genome Database

JcCA0081131.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0081131.10 - phase: 0 
         (266 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01008745001 assembled CDS                                       405   e-113
GSVIVT01005191001 assembled CDS                                       367   e-102
GSVIVT01032563001 assembled CDS                                       224   4e-59
GSVIVT01017841001 assembled CDS                                       221   4e-58
GSVIVT01031675001 assembled CDS                                       191   3e-49
GSVIVT01000153001 assembled CDS                                       145   2e-35
GSVIVT01037870001 assembled CDS                                       145   2e-35
GSVIVT01037866001 assembled CDS                                       139   9e-34
GSVIVT01028915001 assembled CDS                                       109   2e-24

>GSVIVT01008745001 assembled CDS
          Length = 288

 Score =  405 bits (1040), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 198/266 (74%), Positives = 219/266 (82%), Gaps = 1/266 (0%)

Query: 1   MAKVRHSRFQARKWSXXXXXXXXXXXXXXXXXXXXXXGIFSLPISNEDSTPIDLTTSYRR 60
           MAK R+SR   ++WS                      GI SLPI   DS   +  +S+RR
Sbjct: 1   MAKGRYSRGHGKRWSTLALVLSLLLMLTVVLLMLLALGIVSLPIGTVDSDAANDLSSFRR 60

Query: 61  MTVERDGDGQEKREEQWTEIVSWEPRAFLYHNFLSKEECEYLIALARPHMVKSTVVDSKT 120
            T +  G+G  KR EQWTEIVSWEPRAF+YHNFLSKEECEY+I+LA+P+M KSTVVDS+T
Sbjct: 61  KTFD-GGEGLGKRGEQWTEIVSWEPRAFIYHNFLSKEECEYMISLAKPYMKKSTVVDSET 119

Query: 121 GRSKDSRVRTSSGMFLRRGRDKIIRNIEKRIADFSFIPVEHGEGLQILHYEVGQKYEAHY 180
           GRSKDSRVRTSSGMFLRRGRDKIIR+IEKRIADF+FIPVEHGEGLQ+LHYEVGQKY+AHY
Sbjct: 120 GRSKDSRVRTSSGMFLRRGRDKIIRDIEKRIADFTFIPVEHGEGLQVLHYEVGQKYDAHY 179

Query: 181 DYFLDEFNTKNGGQRTATLLMYLSDVEEGGETVFPAAQANISSVPWWNELSECGKRGLSV 240
           DYFLDEFNTKNGGQR ATLLMYLSDVEEGGETVFPA +AN SSVPWWNELSECGK+GLSV
Sbjct: 180 DYFLDEFNTKNGGQRIATLLMYLSDVEEGGETVFPATKANFSSVPWWNELSECGKKGLSV 239

Query: 241 KPKMGNALLFWSTRPDATLDPSSLHG 266
           KPKMG+ALLFWS RPDATLDPSSLHG
Sbjct: 240 KPKMGDALLFWSMRPDATLDPSSLHG 265


>GSVIVT01005191001 assembled CDS
          Length = 288

 Score =  367 bits (943), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/267 (68%), Positives = 210/267 (78%), Gaps = 3/267 (1%)

Query: 1   MAKVRHSRFQARKWSXXXXXXXXXXXXXXXXXXXXXXGIFSLPISNEDSTPI-DLTTSYR 59
           MAK R+ RF  RK S                      G+ S+P  + DS    DL+T   
Sbjct: 1   MAKPRYPRFPPRKSSSSTVVLSMLLMFSFVVLVLLALGLLSIPSHSGDSPRANDLSTIVH 60

Query: 60  RMTVERDGDGQEKREEQWTEIVSWEPRAFLYHNFLSKEECEYLIALARPHMVKSTVVDSK 119
           R TVER  DG + + E W+E++SWEPRAF+YHNFLSK+ECEYLI LA+PHM KSTVVDS 
Sbjct: 61  R-TVERS-DGNDGKGEPWSEVISWEPRAFVYHNFLSKDECEYLIKLAKPHMQKSTVVDSS 118

Query: 120 TGRSKDSRVRTSSGMFLRRGRDKIIRNIEKRIADFSFIPVEHGEGLQILHYEVGQKYEAH 179
           TG+SKDSRVRTSSG FL RG+DKIIR IEKR++DF+F+PVEHGEGLQILHYEVGQKYE H
Sbjct: 119 TGKSKDSRVRTSSGTFLTRGQDKIIRGIEKRLSDFTFLPVEHGEGLQILHYEVGQKYEPH 178

Query: 180 YDYFLDEFNTKNGGQRTATLLMYLSDVEEGGETVFPAAQANISSVPWWNELSECGKRGLS 239
           YDYFLD++NTKNGGQR AT+LMYLSDVEEGGETVFPAA+ N SSVPWWNELS+CGK GLS
Sbjct: 179 YDYFLDDYNTKNGGQRMATVLMYLSDVEEGGETVFPAAKGNFSSVPWWNELSDCGKEGLS 238

Query: 240 VKPKMGNALLFWSTRPDATLDPSSLHG 266
           VKPKMG+ALLFWS +PDA+LDPSSLHG
Sbjct: 239 VKPKMGDALLFWSMKPDASLDPSSLHG 265


>GSVIVT01032563001 assembled CDS
          Length = 316

 Score =  224 bits (570), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 108/186 (58%), Positives = 141/186 (75%), Gaps = 1/186 (0%)

Query: 81  VSWEPRAFLYHNFLSKEECEYLIALARPHMVKSTVVDSKTGRSKDSRVRTSSGMFLRRGR 140
           +SW PRAFLY  FLS+EEC++LI LA+  + KS V D+++G+S  S VRTSSGMFL + +
Sbjct: 57  LSWRPRAFLYKGFLSEEECDHLITLAKDKLEKSMVADNESGKSIMSEVRTSSGMFLLKAQ 116

Query: 141 DKIIRNIEKRIADFSFIPVEHGEGLQILHYEVGQKYEAHYDYFLDEFNTKNGGQRTATLL 200
           D+I+ +IE RIA ++F+PVE+GE +QILHYE G+KYE H+DYF D+ N   GG R AT+L
Sbjct: 117 DEIVADIEARIAAWTFLPVENGESIQILHYENGEKYEPHFDYFHDKVNQLLGGHRIATVL 176

Query: 201 MYLSDVEEGGETVFPAAQANISSVPWWNELSECGKRGLSVKPKMGNALLFWSTRPDATLD 260
           MYL+ VEEGGETVFP ++   S  P  +  S+C K+G +V PK G+ALLF+S  PDAT D
Sbjct: 177 MYLATVEEGGETVFPNSEGRFSQ-PKDDSWSDCAKKGYAVNPKKGDALLFFSLHPDATTD 235

Query: 261 PSSLHG 266
           PSSLHG
Sbjct: 236 PSSLHG 241


>GSVIVT01017841001 assembled CDS
          Length = 298

 Score =  221 bits (562), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 101/188 (53%), Positives = 144/188 (76%), Gaps = 2/188 (1%)

Query: 81  VSWEPRAFLYHNFLSKEECEYLIALARPHMVKSTVVDSKTGRSKDSRVRTSSGMFLRRGR 140
           +SW+PRAF+Y  FLS+EEC++LI+LA+  + +S V D+ +G+S+ S VRTSSGMF+ +G+
Sbjct: 40  ISWKPRAFVYEGFLSEEECDHLISLAKSELKRSAVADNVSGKSRLSEVRTSSGMFIGKGK 99

Query: 141 DKIIRNIEKRIADFSFIPVEHGEGLQILHYEVGQKYEAHYDYFLDEFNTKNGGQRTATLL 200
           D I+  IE +IA ++F+P ++GE +Q+L YE GQKY+AHYDYF+D+ N   GG R AT+L
Sbjct: 100 DPIVAGIEDKIAAWTFLPKDNGEDMQVLRYEPGQKYDAHYDYFVDKVNIARGGHRIATVL 159

Query: 201 MYLSDVEEGGETVFPAAQ--ANISSVPWWNELSECGKRGLSVKPKMGNALLFWSTRPDAT 258
           MYLSDV +GGETVFP A+  +    +P  ++LSEC ++G++VKP+ G+ALLF+S  P A 
Sbjct: 160 MYLSDVVKGGETVFPMAEEPSRRKPLPTNDDLSECARKGIAVKPRKGDALLFFSLHPTAI 219

Query: 259 LDPSSLHG 266
            DP SLHG
Sbjct: 220 PDPMSLHG 227


>GSVIVT01031675001 assembled CDS
          Length = 287

 Score =  191 bits (485), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 101/193 (52%), Positives = 126/193 (65%), Gaps = 14/193 (7%)

Query: 79  EIVSWEPRAFLYHNFLSKEECEYLIALARPHMVKSTVVDSKTGRSKDSRVRTSSGMFLRR 138
           EI++W PR  L H+FLS EEC+YL A+A P +  STVVD++TG+   S VRTSSGMFL  
Sbjct: 82  EILNWSPRIILLHSFLSSEECDYLRAMAEPLLQISTVVDAQTGKGIQSDVRTSSGMFLSP 141

Query: 139 GRDK--IIRNIEKRIADFSFIPVEHGEGLQILHYEVGQKYEAHYDYFLDEFNTKNGGQRT 196
                 I+R IEKRI+ +S +PVE+GE +Q+L Y+  Q Y+ H+DYF D FN K GGQR 
Sbjct: 142 DDSTYPIVRAIEKRISVYSQVPVENGELIQVLRYKKSQFYKPHHDYFSDSFNLKRGGQRV 201

Query: 197 ATLLMYLSDVEEGGETVFPAAQANISSVPWWNELSECGK---RGLSVKPKMGNALLFWST 253
           AT+L+YLSD  EGGET FP A +             CG    RGLSV P  GNA+LFWS 
Sbjct: 202 ATMLIYLSDNVEGGETYFPMAGSG---------FCRCGGKSVRGLSVAPVKGNAVLFWSM 252

Query: 254 RPDATLDPSSLHG 266
             D   DP+S+HG
Sbjct: 253 GLDGQSDPNSIHG 265


>GSVIVT01000153001 assembled CDS
          Length = 285

 Score =  145 bits (366), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 80/192 (41%), Positives = 113/192 (58%), Gaps = 9/192 (4%)

Query: 79  EIVSWEPRAFLYHNFLSKEECEYLIALARPHMVKSTVVDSKTG--RSKDSRVRTSSGMFL 136
           +++SW PRA  + NF + E+C+ +I +A+ ++  STV   + G  R     +RTSSG+F+
Sbjct: 76  QVLSWRPRALYFPNFATSEQCQSIINMAKSNLTPSTVA-LRVGEIRGNTEGIRTSSGVFI 134

Query: 137 RRGRDKI--IRNIEKRIADFSFIPVEHGEGLQILHYEVGQKYEAHYDYFLDEFNTKNGGQ 194
               DK   +  IE++IA    IP  HGE   +L YE+GQ+Y +HYD F           
Sbjct: 135 SASEDKTGTLDLIEQKIARVIMIPRTHGEAFNVLRYEIGQRYNSHYDAFDPAEYGPQKSH 194

Query: 195 RTATLLMYLSDVEEGGETVFPAAQANISSVPWWNELSECGKRGLSVKPKMGNALLFWSTR 254
           R AT L+YLSDVEEGGET+FP    N  ++    +   C   GL VKP  G+ LLF+S  
Sbjct: 195 RIATFLVYLSDVEEGGETMFPF--ENGLNMDKDYDFQRC--IGLKVKPHQGDGLLFYSMF 250

Query: 255 PDATLDPSSLHG 266
           P+ T+DP+SLHG
Sbjct: 251 PNGTIDPTSLHG 262


>GSVIVT01037870001 assembled CDS
          Length = 284

 Score =  145 bits (365), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 11/193 (5%)

Query: 79  EIVSWEPRAFLYHNFLSKEECEYLIALARPHMVKSTVVDSKTGRSKDSR--VRTSSGMFL 136
           +++SW+PRA  +  F + E+C+ +I +A+ H+  ST+   + G + +S    RTSSG F+
Sbjct: 75  QVLSWKPRALYFPRFATAEQCQSIIEMAKSHLRPSTLA-LRQGETDESTKGTRTSSGTFI 133

Query: 137 RRGRDK--IIRNIEKRIADFSFIPVEHGEGLQILHYEVGQKYEAHYDYFLDEFNTKNGGQ 194
               DK  I+  +E++IA  + IP  HGE   IL YE+GQ+Y +HYD F          Q
Sbjct: 134 SASEDKTGILDFVERKIAKATMIPRSHGEAFNILRYEIGQRYNSHYDAFNPAEYGPQTSQ 193

Query: 195 RTATLLMYLSDVEEGGETVFPAAQ-ANISSVPWWNELSECGKRGLSVKPKMGNALLFWST 253
           R A+ L+YLSDVEEGGET+FP     NI +     +  +C   GL VKP+ G+ LLF+S 
Sbjct: 194 RVASFLLYLSDVEEGGETMFPFEHDLNIGT---GYDYKKC--IGLKVKPQRGDGLLFYSV 248

Query: 254 RPDATLDPSSLHG 266
            P+ T+D +SLHG
Sbjct: 249 FPNGTIDRTSLHG 261


>GSVIVT01037866001 assembled CDS
          Length = 282

 Score =  139 bits (351), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 12/193 (6%)

Query: 79  EIVSWEPRAFLYHNFLSKEECEYLIALARPHMVKSTVVDSKTGRSKDSR--VRTSSGMFL 136
           +++SW+PRA  + +F + E+C+ +I +A+  +  ST+V  K G +++S   +RTSSG F+
Sbjct: 74  QVLSWKPRARYFPHFATAEQCQSIIEMAKSGLSPSTLVLRK-GETEESTKGIRTSSGTFI 132

Query: 137 RRGRDK--IIRNIEKRIADFSFIPVEHGEGLQILHYEVGQKYEAHYDYFLDEFNTKNGGQ 194
               DK  I+  IE++IA  + IP  HGE   IL YE+GQ+Y +HYD            Q
Sbjct: 133 SASEDKTGILDFIERKIAKATMIPRNHGEVFNILRYEIGQRYNSHYDAISPAEYGLQTSQ 192

Query: 195 RTATLLMYLSDVEEGGETVFPAAQ-ANISSVPWWNELSECGKRGLSVKPKMGNALLFWST 253
           R A+ L+YLSDVEEGGET+FP     NI      N  +     GL VKP+ G+ LLF+S 
Sbjct: 193 RIASFLLYLSDVEEGGETMFPFEHDLNI------NTFNSRKCIGLKVKPRRGDGLLFYSV 246

Query: 254 RPDATLDPSSLHG 266
            P+ T+D +S+HG
Sbjct: 247 FPNGTIDWTSMHG 259


>GSVIVT01028915001 assembled CDS
          Length = 317

 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 107/183 (58%), Gaps = 3/183 (1%)

Query: 81  VSWEPRAFLYHNFLSKEECEYLIALARPHMVKSTVVDSKTGRSKDSRVRTSSGMFLRRGR 140
           +SW+PRAFLY  FLS EEC++LI+LA     +       +G     R+  SS   L    
Sbjct: 60  LSWQPRAFLYRGFLSDEECDHLISLALGKKEELATNGGDSGNVVLKRLLKSSEGPLYID- 118

Query: 141 DKIIRNIEKRIADFSFIPVEHGEGLQILHYEVGQKYEAHYDYFLDEFNTKNGGQRTATLL 200
           D++   IEKRI+ ++F+P E+ E L+++ Y+  +  +  Y+YF ++  +K G    AT+L
Sbjct: 119 DEVAARIEKRISAWTFLPKENSEPLEVVQYQF-ENAKQKYNYFSNKSTSKFGEPLMATVL 177

Query: 201 MYLSDVEEGGETVFPAAQANISSVPWWNELSECGKRGLSVKPKMGNALLFWSTRPDATLD 260
           ++LS+V  GGE  FP ++   +S      LS+C +    ++P  GNA+LF++  P+A+ D
Sbjct: 178 LHLSNVTRGGELFFPESELK-NSQSKSGILSDCTESSSGLRPVKGNAILFFNVHPNASPD 236

Query: 261 PSS 263
            SS
Sbjct: 237 KSS 239