Jatropha Genome Database

JcCA0079711.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0079711.10 + phase: 0 
         (376 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01018081001 assembled CDS                                       521   e-148
GSVIVT01021793001 assembled CDS                                       512   e-145
GSVIVT01017261001 assembled CDS                                       120   9e-28
GSVIVT01016574001 assembled CDS                                       119   3e-27
GSVIVT01025003001 assembled CDS                                       110   8e-25
GSVIVT01035142001 assembled CDS                                        97   8e-21
GSVIVT01028014001 assembled CDS                                        84   1e-16
GSVIVT01025597001 assembled CDS                                        78   7e-15
GSVIVT01023706001 assembled CDS                                        50   1e-06
GSVIVT01019547001 assembled CDS                                        50   2e-06

>GSVIVT01018081001 assembled CDS
          Length = 256

 Score =  521 bits (1343), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 246/256 (96%), Positives = 253/256 (98%)

Query: 121 MISFNMLEAARINGAKRFFYASSACIYPEFKQLDTNVSLKESDAWPAEPQDAYGLEKLAT 180
           MISFNMLEA+RING KRFFYASSACIYPEFKQL+TNVSLKESDAWPAEPQDAYGLEKLAT
Sbjct: 1   MISFNMLEASRINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 60

Query: 181 EELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSTDKFEMWGDGLQ 240
           EELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSTDKFEMWGDGLQ
Sbjct: 61  EELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSTDKFEMWGDGLQ 120

Query: 241 TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE 300
           TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFE+K LPIHHIPGPE
Sbjct: 121 TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKNLPIHHIPGPE 180

Query: 301 GVRGRNSDNTLIKEKLGWAPTMKLKDGLRITYFWIKDQIEKEKVQGVDLSIYGSSKVVGT 360
           GVRGRNSDN LIKEKLGWAPTM+LKDGLRITYFWIK+QIEKEKVQG+DLS+YGSSKVVGT
Sbjct: 181 GVRGRNSDNNLIKEKLGWAPTMRLKDGLRITYFWIKEQIEKEKVQGIDLSVYGSSKVVGT 240

Query: 361 QAPVQLGSLRAADGKE 376
           QAPVQLGSLRAADGKE
Sbjct: 241 QAPVQLGSLRAADGKE 256


>GSVIVT01021793001 assembled CDS
          Length = 251

 Score =  512 bits (1318), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 242/251 (96%), Positives = 249/251 (99%)

Query: 126 MLEAARINGAKRFFYASSACIYPEFKQLDTNVSLKESDAWPAEPQDAYGLEKLATEELCK 185
           MLEA+RING KRFFYASSACIYPEFKQL+TNVSLKESDAWPAEPQDAYGLEKLATEELCK
Sbjct: 1   MLEASRINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCK 60

Query: 186 HYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSTDKFEMWGDGLQTRSFT 245
           HYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKA+TSTDKFEMWGDGLQTRSFT
Sbjct: 61  HYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 120

Query: 246 FIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGR 305
           FIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFE+K LPIHHIPGPEGVRGR
Sbjct: 121 FIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKNLPIHHIPGPEGVRGR 180

Query: 306 NSDNTLIKEKLGWAPTMKLKDGLRITYFWIKDQIEKEKVQGVDLSIYGSSKVVGTQAPVQ 365
           NSDNTLIKEKLGWAPTMKLKDGLRITYFWIK+QIEKEKV+G+DLSIYGSSKVVGTQAPVQ
Sbjct: 181 NSDNTLIKEKLGWAPTMKLKDGLRITYFWIKEQIEKEKVKGIDLSIYGSSKVVGTQAPVQ 240

Query: 366 LGSLRAADGKE 376
           LGSLRAADGKE
Sbjct: 241 LGSLRAADGKE 251


>GSVIVT01017261001 assembled CDS
          Length = 343

 Score =  120 bits (302), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 59/69 (85%), Positives = 60/69 (86%)

Query: 252 EGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTL 311
           E   RLTKSDFREPVNIGSDEMVSMNEMAEIVLSFE+K LPIHHIPGPEGVRGRNS N L
Sbjct: 228 ELYFRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKNLPIHHIPGPEGVRGRNSHNNL 287

Query: 312 IKEKLGWAP 320
           IKEKL   P
Sbjct: 288 IKEKLVGFP 296


>GSVIVT01016574001 assembled CDS
          Length = 345

 Score =  119 bits (297), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 149/312 (47%), Gaps = 22/312 (7%)

Query: 28  LRISITGAGGFIASHIARRL-KSEGHFIIASD---WKKNEHMTEDMFCHEFHLADLRVMD 83
           +RI +TG  GFI SH+  +L ++E + +I +D       +++ + +    F L    V +
Sbjct: 33  MRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLRKWIGHPRFELIRHDVTE 92

Query: 84  NCLRVTKEVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGAKRFFYASS 143
             L    EVD +++LA     + F + N    +  N + + NML  A+  GA R    S+
Sbjct: 93  PLL---IEVDQIYHLACPASPI-FYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 147

Query: 144 ACIYPEFKQLDTNVSLKESDAW----PAEPQDAYGLEKLATEELCKHYTKDFGIECRIGR 199
           + +Y      D  V  +E   W    P   +  Y   K   E L   Y +  GIE RI R
Sbjct: 148 SEVYG-----DPLVHPQEESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202

Query: 200 FHNIYGPFGTWKGGREKAPAAFCRKAITSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 259
             N YGP      GR    + F  +AI   +   +   G QTRSF ++ + V+G++RL +
Sbjct: 203 IFNTYGPRMNIDDGR--VVSNFIAQAIRG-ESLTVQAPGTQTRSFCYVSDMVDGLVRLME 259

Query: 260 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG-PEGVRGRNSDNTLIKEKLGW 318
            D   P+NIG+    +M E+AE V    + K+ I  +   P+  R R  D T  KE LGW
Sbjct: 260 GDNTGPINIGNPGEFTMLELAETVKELINPKVEISMVENTPDDPRQRKPDITKAKELLGW 319

Query: 319 APTMKLKDGLRI 330
            P +KL++GL +
Sbjct: 320 EPNVKLREGLPL 331


>GSVIVT01025003001 assembled CDS
          Length = 346

 Score =  110 bits (276), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 149/312 (47%), Gaps = 26/312 (8%)

Query: 28  LRISITGAGGFIASHIARRL-KSEGHFIIASD---WKKNEHMTEDMFCHEFHLADLRVMD 83
           +RI +TG  GFI SH+  +L ++E + +I +D       +++ + +    F L    V +
Sbjct: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTE 92

Query: 84  NCLRVTKEVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGAKRFFYASS 143
             L    EVD +++LA     + F + N    +  N + + NML  A+  GA R    S+
Sbjct: 93  PLL---IEVDKIYHLACPASPI-FYKHNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 147

Query: 144 ACIY------PEFKQLDTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRI 197
           + +Y      P+ +    NV+       P   +  Y   K   E L   Y +  GIE RI
Sbjct: 148 SEVYGDPLEHPQTESYWGNVN-------PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200

Query: 198 GRFHNIYGPFGTWKGGREKAPAAFCRKAITSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 257
            R  N YGP      GR    + F  +A+   +   +   G QTRSF ++ + V+G++RL
Sbjct: 201 ARIFNTYGPRMNIDDGR--VVSNFIAQALRG-EPLTVQAPGTQTRSFCYVSDMVDGLIRL 257

Query: 258 TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG-PEGVRGRNSDNTLIKEKL 316
            + +   P+NIG+    +M E+AE V    + ++ I  +   P+  R R  D +  KE L
Sbjct: 258 MEGENTGPINIGNPGEFTMLELAETVKELINPEVVIKMVDNTPDDPRQRKPDISKAKELL 317

Query: 317 GWAPTMKLKDGL 328
           GW P +KL+DGL
Sbjct: 318 GWEPKIKLRDGL 329


>GSVIVT01035142001 assembled CDS
          Length = 345

 Score = 97.4 bits (241), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 117/244 (47%), Gaps = 9/244 (3%)

Query: 89  TKEVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI-SFNMLEAARINGAKRFFYASSACIY 147
           T  VD +++LA     +  +   H V  ++  ++ + NML  A+  GA RF   S++ +Y
Sbjct: 84  THPVDQIYHLACPASPINALY--HFVSTFSTNVVGTLNMLGLAKRVGA-RFLLTSTSEVY 140

Query: 148 PEFKQLDTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPF 207
            +  Q    V     +  P   +  Y   K   E L   Y +  GIE RI R  N YGP 
Sbjct: 141 GDPLQ-HPQVETYWGNVNPIGVRSCYDEGKRTAETLTMAYHRGAGIEVRIARIFNTYGPR 199

Query: 208 GTWKGGREKAPAAFCRKAITSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVN 267
                GR    + F  +A+   +   ++GDG QTRSF ++ + VEG++RL + +   P N
Sbjct: 200 MCIDDGR--VVSNFVAQALRK-EPLTVYGDGKQTRSFQYVSDLVEGLIRLMEGEHVGPFN 256

Query: 268 IGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE-GVRGRNSDNTLIKEKLGWAPTMKLKD 326
           +G+    +M E+A++V    D    I   P  E     R  D +  K+ LGW P++ L++
Sbjct: 257 LGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISKAKQLLGWEPSVSLRN 316

Query: 327 GLRI 330
           GL +
Sbjct: 317 GLPL 320


>GSVIVT01028014001 assembled CDS
          Length = 229

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 6/215 (2%)

Query: 126 MLEAARINGAKRFFYASSACIYPEFKQLDTNVSLKESDAWPAEPQDAYGLEKLATEELCK 185
           ML  A+  GA RF   S++ +Y +  Q    V     +  P   +  Y   K   E L  
Sbjct: 1   MLGLAKRVGA-RFLLTSTSEVYGDPLQ-HPQVETYWGNVNPIGVRSCYDEGKRTAETLTM 58

Query: 186 HYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSTDKFEMWGDGLQTRSFT 245
            Y +   +E RI R  N YGP      GR    + F  +A+   +   ++GDG QTRSF 
Sbjct: 59  DYHRGAEVEVRIARIFNTYGPRMCIDDGR--VVSNFVAQALRK-EPLTVYGDGKQTRSFQ 115

Query: 246 FIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPE-GVRG 304
           ++ + VEG++RL + +   P N+G+    +M E+A++V    D    I   P  E     
Sbjct: 116 YVSDLVEGLIRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHK 175

Query: 305 RNSDNTLIKEKLGWAPTMKLKDGLRITYFWIKDQI 339
           R  D +  K+ LGW P + L+ GL +     +++I
Sbjct: 176 RKPDISKAKDLLGWEPKVALRKGLPLMVSDFRERI 210


>GSVIVT01025597001 assembled CDS
          Length = 220

 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 18/224 (8%)

Query: 126 MLEAARINGAKRFFYASSACIYP---EFKQLDT---NVSLKESDAWPAEPQDAYGLEKLA 179
           ML  A+  GA RF   S++ +Y    E  Q +T   NV+       P   +  Y   K  
Sbjct: 1   MLGLAKRIGA-RFLLTSTSEVYGDPLEHPQKETYWGNVN-------PIGVRSCYDEGKRT 52

Query: 180 TEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAITSTDKFEMWGDGL 239
            E L   Y +   +E RI R  N YGP      GR    + F  +AI       ++GDG 
Sbjct: 53  AETLTMDYHRGAEVEVRIARIFNTYGPRMCIDDGR--VVSNFVAQAIRR-QPLTVYGDGK 109

Query: 240 QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG- 298
           QTRSF ++ + V+G++ L + +   P N+G+    +M E+AE+V    D    I   P  
Sbjct: 110 QTRSFQYVSDLVDGLVALMEGEHVGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNT 169

Query: 299 PEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRITYFWIKDQIEKE 342
            +    R  D +  KE L W P + L++GL +     +++I  E
Sbjct: 170 ADDPHKRKPDISRAKELLNWEPKISLREGLPLMVSDFQNRILNE 213


>GSVIVT01023706001 assembled CDS
          Length = 234

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 5/112 (4%)

Query: 177 KLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRK----AITSTDKF 232
           K+A  ++C+ Y    G +   G   N+YGP+  +         A  R+     ++   + 
Sbjct: 80  KIAGIKMCQGYRLQHGFDAISGMPTNLYGPYDNFHPENSHVLPALIRRFHEAKVSGAKEV 139

Query: 233 EMWGDGLQTRSFTFIDECVEGVLRLT-KSDFREPVNIGSDEMVSMNEMAEIV 283
            +WG G   R F  +D+  +GV+ L  K      VN+GS + V++ E+AE+V
Sbjct: 140 VVWGTGSPLREFLHVDDLADGVVFLMDKYSGLVHVNVGSGKEVTIKELAELV 191


>GSVIVT01019547001 assembled CDS
          Length = 348

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 119/297 (40%), Gaps = 43/297 (14%)

Query: 30  ISITGAGGFIASHIARRLKSEGHFIIASDWKKNE-------------HMTEDMFCHEFHL 76
           I ITG  G+I SH   +L   G   +  D   N                 +++  H+  L
Sbjct: 5   ILITGGAGYIGSHTVLQLLLGGFRAVVVDNLDNSSEIAIHRVKELAAEFGDNLVFHKLDL 64

Query: 77  ADLRVMDNCLRVTKEVDHVFNLAADMGGMGFIQSNHSVIMY--NNTMISFNMLEAARING 134
            D + ++  L  +   D V + A  +  +G  +S    ++Y  NN + +  +LE    +G
Sbjct: 65  RDKQALEQ-LFASTNFDAVIHFAG-LKAVG--ESVQKPLLYYDNNLIGTITLLEVMAAHG 120

Query: 135 AKRFFYASSACIYPEFKQLDTNVSLKESDAWPAEPQDAYGLEKLATEELCKH-YTKDFGI 193
            K+  ++SSA +Y   K++        ++ +P    + YG  KL  E++C+  Y  D   
Sbjct: 121 CKKLVFSSSATVYGWPKEVPC------TEEFPLCAANPYGRTKLVIEDICRDIYGSDSEW 174

Query: 194 ECRIGRFHNIYGPFGTWKGGRE------------KAPAAFCRKAITSTDKFEMWGDGLQT 241
           +  + R+ N  G   +   G +            +  A   R A+T         DG   
Sbjct: 175 KIVLLRYFNPVGAHSSGHIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGSDYSTKDGTGV 234

Query: 242 RSFTFIDECVEG----VLRLTKSDFR-EPVNIGSDEMVSMNEMAEIVLSFEDKKLPI 293
           R +  + +  +G    + +L  S+   E  N+G+ +  S+ EM         KK+P+
Sbjct: 235 RDYIHVVDLADGHIAALCKLFNSEIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPL 291