Jatropha Genome Database

JcCA0079611.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0079611.20 + phase: 0 /partial
         (392 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01032922001 assembled CDS                                       776   0.0  
GSVIVT01020069001 assembled CDS                                       494   e-140
GSVIVT01008714001 assembled CDS                                       405   e-113
GSVIVT01031746001 assembled CDS                                       384   e-107
GSVIVT01031740001 assembled CDS                                       376   e-105
GSVIVT01031742001 assembled CDS                                        70   2e-12
GSVIVT01031741001 assembled CDS                                        62   4e-10
GSVIVT01031743001 assembled CDS                                        50   2e-06
GSVIVT01031747001 assembled CDS                                        50   2e-06

>GSVIVT01032922001 assembled CDS
          Length = 975

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/392 (89%), Positives = 371/392 (94%)

Query: 1   FQGFNWESWRRRWYVELAPKAADLYQSGVTAVWFPPPTESVAPQGYMPSDLYNLNSAYGT 60
           FQGFNWESWRR+WY+ELAPKAADL Q G+TAVW PPPTESVAPQGYMPSDLYNLNSAYGT
Sbjct: 584 FQGFNWESWRRQWYLELAPKAADLSQCGITAVWLPPPTESVAPQGYMPSDLYNLNSAYGT 643

Query: 61  EEELKYCIEEMHSHDLLALGDVVLNHRCAQKQSPNGVWNIFGGKISWGPEAIVCDDPNFQ 120
            EELK+CI+EMH+ DLLALGDVVLNHRCA KQSPNGVWNIFGGK++WGPEAIVCDDPNFQ
Sbjct: 644 MEELKHCIDEMHTQDLLALGDVVLNHRCAHKQSPNGVWNIFGGKLAWGPEAIVCDDPNFQ 703

Query: 121 GRGNPSSGDIFHAAPNIDHSQDFVRKDIKVWLNWLRSHICFDGWRLDFVRGFSGTYFKEY 180
           GRGNPSSGDIFHAAPNIDHSQDFVR+DIK WLNWLR+ I FDGWRLDFVRGFSGTY KEY
Sbjct: 704 GRGNPSSGDIFHAAPNIDHSQDFVRRDIKEWLNWLRNDIGFDGWRLDFVRGFSGTYVKEY 763

Query: 181 IEASDPAFAIGEYWDSLAYENGSLCYNQDAHRQRIVNWINATGGTSSAFDVTTKGILHSA 240
           IE S+PAFAIGEYWDSLAYE G LCYNQDAHRQRI+NWINAT GTSSAFDVTTKGILH A
Sbjct: 764 IEVSNPAFAIGEYWDSLAYEGGDLCYNQDAHRQRIINWINATDGTSSAFDVTTKGILHYA 823

Query: 241 LHNQYWRLIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHWPFPRDKLMQGYAYILTHP 300
           LHNQYWRLIDPQGKPTGV+GWWPSRAVTFLENHDTGSTQGHWPFPRDKL QGYAYILTHP
Sbjct: 824 LHNQYWRLIDPQGKPTGVVGWWPSRAVTFLENHDTGSTQGHWPFPRDKLTQGYAYILTHP 883

Query: 301 GTPTIFYDHFYDFGIRDVITELVEARKRADIHCRSSVKIYHANNEGYVAQIGDTLVMKLG 360
           GTP +FYDHFYDFG+RDVITEL+EAR+RA IHCRSSVKIYHANNEGYVA+I D LVMK+G
Sbjct: 884 GTPVVFYDHFYDFGLRDVITELIEARRRAGIHCRSSVKIYHANNEGYVARIEDALVMKIG 943

Query: 361 HFDWNPSKEINLDGSWQKFVDKGSDYQVWLRQ 392
           HFDWNPSKE +LDGSWQKFVDKGS+YQ+WLRQ
Sbjct: 944 HFDWNPSKENDLDGSWQKFVDKGSEYQLWLRQ 975


>GSVIVT01020069001 assembled CDS
          Length = 885

 Score =  494 bits (1271), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 239/390 (61%), Positives = 291/390 (74%), Gaps = 7/390 (1%)

Query: 2   QGFNWESWRR-RWYVELAPKAADLYQSGVTAVWFPPPTESVAPQGYMPSDLYNLNSAYGT 60
           QGFNWES +  RWY+EL+ K A+L   G T VW PPPT SV+P+GYMP+DLYNLNS YG+
Sbjct: 498 QGFNWESNKSGRWYMELSKKVAELSSLGFTVVWLPPPTASVSPEGYMPTDLYNLNSRYGS 557

Query: 61  EEELKYCIEEMHSHDLLALGDVVLNHRCAQKQSPNGVWNIFGGKISWGPEAIVCDDPNFQ 120
            +ELK  ++  H   +  LGDVVLNHRCAQ Q+ NG+WNIFGG+++W   AIV DDP+FQ
Sbjct: 558 SDELKVLVKSFHEVGVKVLGDVVLNHRCAQYQNQNGIWNIFGGRLNWDDRAIVADDPHFQ 617

Query: 121 GRGNPSSGDIFHAAPNIDHSQDFVRKDIKVWLNWLRSHICFDGWRLDFVRGFSGTYFKEY 180
           GRGN SSGD FHAAPNIDHSQDFVR+DIK WL WLR  I +DGWRLDFVRGF G Y K+Y
Sbjct: 618 GRGNKSSGDNFHAAPNIDHSQDFVREDIKEWLCWLRKEIGYDGWRLDFVRGFWGGYVKDY 677

Query: 181 IEASDPAFAIGEYWDSLAYENGSLCYNQDAHRQRIVNWINATGGTSSAFDVTTKGILHSA 240
           ++AS+P FA+GEYWDSL+Y  G + +NQDAHRQRI++WINAT G + AFDVTTKGILHSA
Sbjct: 678 MDASEPYFAVGEYWDSLSYTYGEMDHNQDAHRQRIIDWINATNGAAGAFDVTTKGILHSA 737

Query: 241 L-HNQYWRLIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHWPFPRDKLMQGYAYILTH 299
           L   +YWRL D + KP GV+GWWPSRAVTF+ENHDTGSTQGHW FP  K MQGYAYILTH
Sbjct: 738 LGRCEYWRLSDQKRKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPGGKEMQGYAYILTH 797

Query: 300 PGTPTIFYDHFYDFGIRDVITELVEARKRADIHCRSSVKIYHANNEGYVAQIGDTLVMKL 359
           PGTP +F+DH +    R  I  L+  R R +IHCRS+++I  A  + Y A I + + MK+
Sbjct: 798 PGTPAVFFDHLFSH-YRSEIASLISLRNRNEIHCRSTIQITMAERDVYAAIIDEKVAMKI 856

Query: 360 GHFDWNPSKEINLDGSWQKFVDKGSDYQVW 389
           G   + P K       W   ++ G DY++W
Sbjct: 857 GPGYYEPPKG---QQRWTLALE-GKDYKIW 882


>GSVIVT01008714001 assembled CDS
          Length = 411

 Score =  405 bits (1040), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 204/385 (52%), Positives = 261/385 (67%), Gaps = 10/385 (2%)

Query: 1   FQGFNWESWRRRWYVELAPKAADLYQSGVTAVWFPPPTESVAPQGYMPSDLYNLNSAYGT 60
            QGFNWES +  W+  L  K  D+ +SG T+VW PP ++S +P+GY+P +LY+LNS+YG+
Sbjct: 28  LQGFNWESHKHDWWRNLEKKVPDVAKSGFTSVWLPPASQSFSPEGYLPQNLYSLNSSYGS 87

Query: 61  EEELKYCIEEMHSHDLLALGDVVLNHRCAQKQSPNGVWNIFGG-KISWGPEAIV-CDDPN 118
           E  LK  +++++ H + A+ D+V+NHR    Q   G++N + G  +SW   A+  C    
Sbjct: 88  EHLLKNLLQKLNQHKVRAMADIVINHRVGTTQGHGGMYNRYDGIPLSWNEHAVTSCTG-- 145

Query: 119 FQGRGNPSSGDIFHAAPNIDHSQDFVRKDIKVWLNWLRSHICFDGWRLDFVRGFSGTYFK 178
             G GN SSG  FH  PNIDH+Q+FVR D+  WL WLR  + F  +R DF RG+S  Y K
Sbjct: 146 --GLGNRSSGANFHGVPNIDHTQNFVRNDLIGWLKWLRG-VGFQDFRFDFARGYSAKYVK 202

Query: 179 EYIEASDPAFAIGEYWDSLAYENGSLCYNQDAHRQRIVNWINATGGTSSAFDVTTKGILH 238
           EYIE + P F++GEYWD   Y N  L YNQD+HRQRIVNWI+ TG  S+AFD TTKGIL 
Sbjct: 203 EYIEGARPIFSVGEYWDPCNYNNNGLDYNQDSHRQRIVNWIDGTGQLSAAFDFTTKGILQ 262

Query: 239 SALHNQYWRLIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHWPFPRDKLMQGYAYILT 298
            A+  Q+WRL D QGKP GVMGWWPSRAVTF++NHDTGSTQ HWPFP + LM+GYAYILT
Sbjct: 263 EAVKGQFWRLRDRQGKPPGVMGWWPSRAVTFIDNHDTGSTQAHWPFPMNHLMEGYAYILT 322

Query: 299 HPGTPTIFYDHFYDFG--IRDVITELVEARKRADIHCRSSVKIYHANNEGYVAQIGDTLV 356
           HPG PT+FYDHFYD+   I + I +L+  RK  DIH RSS+KI  A    Y A IGD + 
Sbjct: 323 HPGIPTVFYDHFYDWAGSIHNEIAKLIAVRKEQDIHSRSSIKILEAQPNLYSAIIGDKVC 382

Query: 357 MKLGHFDWNP-SKEINLDGSWQKFV 380
           MK+G   W P  +E  L  S Q++ 
Sbjct: 383 MKIGDGSWCPGGREWTLATSGQRYA 407


>GSVIVT01031746001 assembled CDS
          Length = 425

 Score =  384 bits (987), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/404 (47%), Positives = 265/404 (65%), Gaps = 17/404 (4%)

Query: 1   FQGFNWESWRRR--WYVELAPKAADLYQSGVTAVWFPPPTESVAPQGYMPSDLYNLN-SA 57
           FQGFNWES ++   WY  L     +L  SG+T VW PPP++SV+P+GYMP  LY+LN S 
Sbjct: 27  FQGFNWESSKKEGGWYNFLINSIPELAASGITHVWLPPPSQSVSPEGYMPGRLYDLNASK 86

Query: 58  YGTEEELKYCIEEMHSHDLLALGDVVLNHRCAQKQSPNGVWNIFGG-----KISWGPEAI 112
           YGT++ELK  I+  HS  +  + D+V+NHR A+KQ   G+W IF G     ++ W P  I
Sbjct: 87  YGTQDELKTLIKVFHSKGVQCIADIVINHRTAEKQDARGIWAIFEGGTPDDRLDWTPSFI 146

Query: 113 VCDD-PNFQGRGNPSSGDIFHAAPNIDHSQDFVRKDIKVWLNWLRSHICFDGWRLDFVRG 171
             DD P   G GNP SGD + AAP+IDH    V++++  W+NWL+  I FDGWR DF RG
Sbjct: 147 CKDDTPYSDGTGNPDSGDDYSAAPDIDHINPRVQQELIDWMNWLKIEIGFDGWRFDFARG 206

Query: 172 FSGTYFKEYIEASDPAFAIGEYWDSLAYE-NGSLCYNQDAHRQRIVNWINATGGTSSAFD 230
           FS  + K Y+  + P FA+GE W SL+Y  +G   YNQD+HR+ +V W+   GG  +AFD
Sbjct: 207 FSPAFTKFYMAKTRPKFAVGEIWKSLSYRSDGKPSYNQDSHRRELVEWVRGAGGAVNAFD 266

Query: 231 VTTKGILHSALHNQYWRLIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHWPFPRDKLM 290
            TTKGIL +A+  + WR+ D  GKP G++G  P  AVTF++NHDTGST  HWPFP DK+M
Sbjct: 267 FTTKGILQAAVEGELWRMKDLNGKPPGMIGLMPGNAVTFIDNHDTGSTLQHWPFPSDKVM 326

Query: 291 QGYAYILTHPGTPTIFYDHFYDFGIRDVITELVEARKRADIHCRSSVKIYHANNEGYVAQ 350
           QGYAYILTHPG P+IFYDHF+++G+++ I +L+  R R  I   S+V+I  ++++ YVA 
Sbjct: 327 QGYAYILTHPGIPSIFYDHFFEWGLKEEIMKLIIIRSRNRIKPNSAVRILASDSDLYVAA 386

Query: 351 IGDTLVMKLGHFDWNPSKEIN--LDGSWQKFVDKGSDYQVWLRQ 392
           I   +++K+G     P  ++   +  S++K    G DY VW ++
Sbjct: 387 IDGKIIVKIG-----PRFDVGNLVPKSFKKIATSGKDYCVWEKK 425


>GSVIVT01031740001 assembled CDS
          Length = 424

 Score =  376 bits (966), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 189/403 (46%), Positives = 263/403 (65%), Gaps = 16/403 (3%)

Query: 1   FQGFNWESWRRR--WYVELAPKAADLYQSGVTAVWFPPPTESVAPQGYMPSDLYNLNSA- 57
           FQGFNWES +++  WY  L     +L  SG+T VW PPP++S A +GY+P  LY+LN++ 
Sbjct: 27  FQGFNWESSKKQGGWYNFLINSIPELSASGITHVWLPPPSQSAASEGYLPGRLYDLNASH 86

Query: 58  YGTEEELKYCIEEMHSHDLLALGDVVLNHRCAQKQSPNGVWNIFGG-----KISWGPEAI 112
           YGT+ ELK  I+   S+ +  + D+V+NHR A+K+   G+W IF G     ++ WGP  I
Sbjct: 87  YGTQYELKALIKAFRSNGIQCIADIVINHRTAEKKDSRGIWAIFEGGTPDDRLDWGPSFI 146

Query: 113 VCDDPNFQ-GRGNPSSGDIFHAAPNIDHSQDFVRKDIKVWLNWLRSHICFDGWRLDFVRG 171
             DD  F  G GNP +G  F  AP+IDH    V++++  W+NWL+  I F GWR DF RG
Sbjct: 147 CSDDTLFSDGTGNPDTGAGFDPAPDIDHVNPRVQRELSDWMNWLKIEIGFAGWRFDFARG 206

Query: 172 FSGTYFKEYIEASDPAFAIGEYWDSLAYENGSLC-YNQDAHRQRIVNWINATGGTSSAFD 230
           +S  + K Y+E + P FA+GE W+SL+Y N S   YNQDAHR+ +V+W+ A GG  +AFD
Sbjct: 207 YSPDFTKLYMENTSPNFAVGEIWNSLSYGNDSKPNYNQDAHRRELVDWVKAAGGAVTAFD 266

Query: 231 VTTKGILHSALHNQYWRLIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHWPFPRDKLM 290
            TTKGIL +A+  + WRL D  G P G++G  P  AVTF++NHDTGSTQ  WPFP DK+M
Sbjct: 267 FTTKGILQAAVEGELWRLKDSNGGPPGMIGLMPENAVTFIDNHDTGSTQKIWPFPSDKVM 326

Query: 291 QGYAYILTHPGTPTIFYDHFYDFGIRDVITELVEARKRADIHCRSSVKIYHANNEGYVAQ 350
           QGY YILTHPG P+IFYDHF+D+G+++ I++L+  R R  I   S V+I  ++ + YVA 
Sbjct: 327 QGYVYILTHPGIPSIFYDHFFDWGLKEEISKLISIRTRNGIKPNSVVRILASDPDLYVAA 386

Query: 351 IGDTLVMKLGHFDWNPSKEI-NLDGSWQKFVDKGSDYQVWLRQ 392
           I + ++ K+G     P  ++ NL  S  K    G++Y VW +Q
Sbjct: 387 IDEKIIAKIG-----PRYDVGNLVPSTFKLATSGNNYAVWEKQ 424


>GSVIVT01031742001 assembled CDS
          Length = 129

 Score = 70.1 bits (170), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/70 (44%), Positives = 50/70 (71%), Gaps = 1/70 (1%)

Query: 295 YILTHPGTPTIFYDHFYDFGIRDVITELVEARKRADIHCRSSVKIYHANNEGYVAQIGDT 354
           YILTHPG P+IFYDHF+++G+++ I +L+  R R  I   S+V+I  ++++ YVA I   
Sbjct: 42  YILTHPGIPSIFYDHFFEWGLKEEIMKLIMIRSRNRIKPNSAVRILASDSDLYVAAIDGK 101

Query: 355 LVMKLG-HFD 363
           +++K+G  FD
Sbjct: 102 IIVKIGPRFD 111


>GSVIVT01031741001 assembled CDS
          Length = 119

 Score = 62.0 bits (149), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 1/54 (1%)

Query: 46 YMPSDLYNLN-SAYGTEEELKYCIEEMHSHDLLALGDVVLNHRCAQKQSPNGVW 98
          YMP  LY+LN S YGT++ELK  I+  HS  +  + D+V+NHR A+KQ   G+W
Sbjct: 11 YMPGRLYDLNASKYGTQDELKTLIKVFHSKGVQCIADIVINHRTAEKQDARGIW 64


>GSVIVT01031743001 assembled CDS
          Length = 185

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)

Query: 1   FQGFNWESWRRR--WYVELAPKAADLYQSGVTAVWFPPPTESVAPQG 45
           FQGFNWES +++  WY  L     +L  SG+T VW PPP++S A +G
Sbjct: 125 FQGFNWESSKKQGGWYNFLINSIPELSASGITHVWLPPPSQSNASEG 171


>GSVIVT01031747001 assembled CDS
          Length = 272

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 7/84 (8%)

Query: 305 IFYDHFYDFGIRDVITELVEARKRADIHCRSSVKIYHANNEGYVAQIGDTLVMKLGHFDW 364
           IFYDHF+++G+++ I +L+  R R  I   S+V+I  ++ + YVA I   +++K+G    
Sbjct: 13  IFYDHFFEWGLKEEILKLIMIRTRNRIKPNSAVRILASDLDLYVAVIDGKIIVKIG---- 68

Query: 365 NPSKEIN--LDGSWQKFVDKGSDY 386
            P  ++   +  S++K    G DY
Sbjct: 69  -PGFDVGNLVPQSFKKIATSGKDY 91