Jatropha Genome Database

JcCA0077901.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0077901.10 + phase: 1 /partial
         (437 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01034237001 assembled CDS                                       668   0.0  
GSVIVT01008827001 assembled CDS                                       491   e-139
GSVIVT01008829001 assembled CDS                                       470   e-133
GSVIVT01003954001 assembled CDS                                       420   e-118
GSVIVT01000173001 assembled CDS                                       223   1e-58
GSVIVT01009387001 assembled CDS                                       221   4e-58
GSVIVT01008828001 assembled CDS                                       165   4e-41
GSVIVT01025700001 assembled CDS                                        94   2e-19

>GSVIVT01034237001 assembled CDS
          Length = 541

 Score =  668 bits (1724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/436 (77%), Positives = 370/436 (84%)

Query: 1   KHLAEHCKAEYPRVPNFILWILAEIAIVACDIPEVIGTAFALNMLFRIPIWIXXXXXXXX 60
           KHLAEHC+ EYP+VPNFILW+LAEIA+VACDIPEVIGTAFALNMLF IP+W         
Sbjct: 105 KHLAEHCRIEYPKVPNFILWVLAEIAVVACDIPEVIGTAFALNMLFNIPVWCGVLLTGLS 164

Query: 61  XXXXXXXQRYGVRKLEFLIAFLVFTIAVCFFVELGYAKPAANEVLYGLFVPQLKGDGATG 120
                  Q+YGVRKLEF IAFLV TIA CFFVELGYAKP ++EVL GLFVPQLKG+GATG
Sbjct: 165 TLVLLALQQYGVRKLEFFIAFLVLTIAACFFVELGYAKPNSSEVLRGLFVPQLKGNGATG 224

Query: 121 LAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRYYLIESAFALAVAFLINVSVI 180
           LAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACR+Y+IES FAL VAFLINVSVI
Sbjct: 225 LAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYMIESGFALMVAFLINVSVI 284

Query: 181 SVSGAVCNSSNLNAEDQSNCKDLDLNKASFLLKNVLGSWSSKLFAIALLASGQSSTITGT 240
            VSGAVC+SSNLN +DQ +CKDLDLNKASFLL+NVLG WSSKLFAIALLASGQSSTITGT
Sbjct: 285 CVSGAVCSSSNLNLDDQESCKDLDLNKASFLLRNVLGKWSSKLFAIALLASGQSSTITGT 344

Query: 241 YAGQYVMQGFLDLRLTPWIRNFLTRCLAIVPSLIVALIGGSSGAGKLIIIASMILSFELP 300
           YAGQYVMQGFLDLRL PWIRNFLTRCLAI+PSLIVA+IGGSSGAGKLIIIASMILSFELP
Sbjct: 345 YAGQYVMQGFLDLRLQPWIRNFLTRCLAIIPSLIVAIIGGSSGAGKLIIIASMILSFELP 404

Query: 301 FALIPLLKFTSCKTKMGMYANSTTISALTWLVGSLIMSINVYFLATGFIKLLLHGHLKVV 360
           FALIPLLKFTSCKTKMG Y NST I+A+TW++GSL+M+IN+Y+LA+ FIKLLLH HLK+V
Sbjct: 405 FALIPLLKFTSCKTKMGAYVNSTMITAITWIIGSLLMAINIYYLASSFIKLLLHSHLKLV 464

Query: 361 AAVFLGIFGFSAMXXXXXXXXXXXFRKNKGATPLLALTTPEAREMAIGCGDTSVHDLPRE 420
           AAVF GI GFS M           FRKNK AT LLAL T E  E+    G  S+  LPRE
Sbjct: 465 AAVFAGIIGFSGMIVYVCGIGYLVFRKNKKATHLLALATAENGELTNDVGGASMDCLPRE 524

Query: 421 DIVNMQLPQTRSTEDV 436
           DIV+MQLPQ R T DV
Sbjct: 525 DIVSMQLPQRRVTVDV 540


>GSVIVT01008827001 assembled CDS
          Length = 542

 Score =  491 bits (1263), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 252/440 (57%), Positives = 313/440 (71%), Gaps = 15/440 (3%)

Query: 1   KHLAEHCKAEYPRVPNFILWILAEIAIVACDIPEVIGTAFALNMLFRIPIWIXXXXXXXX 60
           KHL+E CKAEYP +  + LW+LAEIA++A DIPEVIGTAFALN+LF++P+W         
Sbjct: 107 KHLSELCKAEYPIIVKYCLWLLAEIAVIAADIPEVIGTAFALNILFKVPVWAGVLFTGFS 166

Query: 61  XXXXXXXQRYGVRKLEFLIAFLVFTIAVCFFVELGYAKPAANEVLYGLFVPQLKGDGATG 120
                  QRYGVRKLE LIA LVF +A CFF E+ Y KP A  VL G+F+P+LKG GATG
Sbjct: 167 TLLLLGLQRYGVRKLELLIAVLVFIMAGCFFGEMSYVKPPATGVLKGMFIPKLKGQGATG 226

Query: 121 LAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRYYLIESAFALAVAFLINVSVI 180
            AI+LLGA+VMPHNLFLHSALVLSRK+P SVRGI EACRY+LIES  AL VAFLINV+V+
Sbjct: 227 DAIALLGALVMPHNLFLHSALVLSRKVPNSVRGINEACRYFLIESGLALFVAFLINVAVV 286

Query: 181 SVSGAVCNSSNLNAEDQSNCKDLDLNKASFLLKNVLGSWSSKLFAIALLASGQSSTITGT 240
           SVSG VC++ NL+ E+   C DL+LN ASFLLKNVLG  S  ++AIAL ASGQSSTITGT
Sbjct: 287 SVSGTVCSADNLSQENLDQCNDLNLNSASFLLKNVLGGSSKVVYAIALFASGQSSTITGT 346

Query: 241 YAGQYVMQGFLDLRLTPWIRNFLTRCLAIVPSLIVALIGGSSGAGKLIIIASMILSFELP 300
           YAGQ++MQGFLD+++  W+RN +TR +AI PSLIV++IGGS+GAG+LIIIASMILSFELP
Sbjct: 347 YAGQFIMQGFLDIKMRKWLRNLMTRSIAITPSLIVSIIGGSAGAGRLIIIASMILSFELP 406

Query: 301 FALIPLLKFTSCKTKMGMYANSTTISALTWLVGSLIMSINVYFLATGFIKLLLHGHLKVV 360
           FALIPLLKF+S  TKMG + NS  I  ++W++G  I+ IN+Y+L+T F+  LLH +L  V
Sbjct: 407 FALIPLLKFSSSNTKMGPHKNSIYIIVISWILGFGIIGINIYYLSTSFVGWLLHNNLPKV 466

Query: 361 AAVFLGIFGFSAMXXXXXXXXXXXFRKNKGATPLLALTTPEARE------MAIGCGDTS- 413
             VF+GI  F  M            RK+     ++    PE  +      M  G   T  
Sbjct: 467 GNVFIGIIVFPLMAIYILSVIYLTTRKDT----VVTFIEPEKNDPNVQNHMENGFDQTDG 522

Query: 414 ----VHDLPREDIVNMQLPQ 429
                H   RED+ ++ LP+
Sbjct: 523 VFELGHVPYREDLADIPLPK 542


>GSVIVT01008829001 assembled CDS
          Length = 535

 Score =  470 bits (1209), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 234/398 (58%), Positives = 290/398 (72%), Gaps = 6/398 (1%)

Query: 1   KHLAEHCKAEYPRVPNFILWILAEIAIVACDIPEVI------GTAFALNMLFRIPIWIXX 54
           KHL+E C+AEYP+   + LW+LAEIA++A DIPE I       TAFALN+LF++P+W   
Sbjct: 80  KHLSELCRAEYPKYVKYCLWLLAEIAVIAADIPEGIFITYSLRTAFALNILFKVPVWAGV 139

Query: 55  XXXXXXXXXXXXXQRYGVRKLEFLIAFLVFTIAVCFFVELGYAKPAANEVLYGLFVPQLK 114
                        QRYGVRKLE LIA LVF +A CFF E+ Y KP A+ V+ G+ +P+LK
Sbjct: 140 LFTGLSTLLLLGLQRYGVRKLEMLIAGLVFIMAGCFFAEMSYVKPPASRVIKGMLIPKLK 199

Query: 115 GDGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRYYLIESAFALAVAFL 174
           G  AT  AI+L GA+VMPHNLFLHSALVLSRK+P SVRG+ EACRY+LIES  AL VAF 
Sbjct: 200 GSTATTDAIALFGALVMPHNLFLHSALVLSRKVPNSVRGVNEACRYFLIESGMALMVAFC 259

Query: 175 INVSVISVSGAVCNSSNLNAEDQSNCKDLDLNKASFLLKNVLGSWSSKLFAIALLASGQS 234
           INV+V+SVSG +C+ +NL+ E+   C DL+LN ASFLLKNVLG  S  ++AIAL ASGQS
Sbjct: 260 INVAVVSVSGTICSVNNLSRENMDQCSDLNLNSASFLLKNVLGGSSKVVYAIALFASGQS 319

Query: 235 STITGTYAGQYVMQGFLDLRLTPWIRNFLTRCLAIVPSLIVALIGGSSGAGKLIIIASMI 294
           STITGTYAGQY+MQGFL+L++  W+RN +TRC+AI PSLIV++I GS+GAG+LIIIASMI
Sbjct: 320 STITGTYAGQYIMQGFLNLKMKRWLRNLMTRCIAITPSLIVSIISGSAGAGRLIIIASMI 379

Query: 295 LSFELPFALIPLLKFTSCKTKMGMYANSTTISALTWLVGSLIMSINVYFLATGFIKLLLH 354
           LSFELPFALIPLLKF+S  TKMG + NS  +   +W++G  +M IN+Y+LATGF+  LLH
Sbjct: 380 LSFELPFALIPLLKFSSSSTKMGPHKNSIYVIVFSWILGFGLMGINIYYLATGFVNWLLH 439

Query: 355 GHLKVVAAVFLGIFGFSAMXXXXXXXXXXXFRKNKGAT 392
             L  V  VF+GI  F  M           FRK+   T
Sbjct: 440 NDLPKVGNVFIGIIVFPLMAVYVLAVLYLTFRKDTVVT 477


>GSVIVT01003954001 assembled CDS
          Length = 510

 Score =  420 bits (1079), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 208/373 (55%), Positives = 281/373 (75%)

Query: 1   KHLAEHCKAEYPRVPNFILWILAEIAIVACDIPEVIGTAFALNMLFRIPIWIXXXXXXXX 60
           KHL+EHC+ EYP+  N+ LWILAE+A++A DIPEVIGTAFA+N+LF +PIW         
Sbjct: 76  KHLSEHCRMEYPKPVNYCLWILAEVAVIAADIPEVIGTAFAINILFHVPIWGGVLLAGLS 135

Query: 61  XXXXXXXQRYGVRKLEFLIAFLVFTIAVCFFVELGYAKPAANEVLYGLFVPQLKGDGATG 120
                  QRYG+RKLE  I  LV  +  CF   + +A+P+A +V+ G+FVP+L GDGAT 
Sbjct: 136 TLLLLGLQRYGIRKLEVAIGGLVLVVGGCFCSVMVHARPSAKDVVTGMFVPKLNGDGATR 195

Query: 121 LAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRYYLIESAFALAVAFLINVSVI 180
            AI+LLGA++MPHNLFLHSALV SRKIP S   I+ A +Y++IES  AL +A LINV+V+
Sbjct: 196 DAIALLGALIMPHNLFLHSALVTSRKIPHSFHAIRSASKYFIIESGLALFIALLINVAVV 255

Query: 181 SVSGAVCNSSNLNAEDQSNCKDLDLNKASFLLKNVLGSWSSKLFAIALLASGQSSTITGT 240
           SVSG+VC++ + +++++ +C+D+ L  ASFLL N LG+WSSKL+A++LLASGQSST+TGT
Sbjct: 256 SVSGSVCSNPHASSQNKDHCEDITLESASFLLNNALGNWSSKLYAVSLLASGQSSTVTGT 315

Query: 241 YAGQYVMQGFLDLRLTPWIRNFLTRCLAIVPSLIVALIGGSSGAGKLIIIASMILSFELP 300
           YAGQY+MQGFLDL++  W+RN +TRC+AI PSL+V +IGGSSGA +LIIIASMILSFELP
Sbjct: 316 YAGQYIMQGFLDLKMRLWLRNLVTRCIAIAPSLMVCIIGGSSGAARLIIIASMILSFELP 375

Query: 301 FALIPLLKFTSCKTKMGMYANSTTISALTWLVGSLIMSINVYFLATGFIKLLLHGHLKVV 360
           FALIPLL+FTS K KMG + +S  ++ L+WL+G   + IN+YFL++  I  + +  +   
Sbjct: 376 FALIPLLRFTSSKAKMGAHRSSIMVTLLSWLLGFGSIGINIYFLSSSLIGWMTNNDIPKT 435

Query: 361 AAVFLGIFGFSAM 373
            ++  G+  F  M
Sbjct: 436 GSILAGVVIFPVM 448


>GSVIVT01000173001 assembled CDS
          Length = 410

 Score =  223 bits (568), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/338 (40%), Positives = 203/338 (60%), Gaps = 14/338 (4%)

Query: 18  ILWILAEIAIVACDIPEVIGTAFALNMLFR--IPIWIXXXXXXXXXXXXXXXQRYGVRKL 75
           +LW++AE+A++  DI EVIG+A A+ +L    +P+W                + YGVRKL
Sbjct: 29  VLWVMAELALIGADIQEVIGSAIAIKILSNGVLPLWSGVIITAFDCFIFLFLENYGVRKL 88

Query: 76  EFLIAFLVFTIAVCFFVELGYAKPAANEVLYGLFVPQLKGDGATGLAISLLGAMVMPHNL 135
           E + AFL+ T+A+ F    G AKP+  E+L G+ +P+L        A+ ++G ++MPHN+
Sbjct: 89  EAVFAFLIATMAISFAWMFGEAKPSGVELLLGILIPKLSSK-TIKQAVGVVGCIIMPHNV 147

Query: 136 FLHSALVLSRKIPRSVRG-IKEACRYYLIESAFALAVAFLINVSVISVSGAVCNSSNLNA 194
           FLHSALV SR+I  S +G ++EA  YY IES  AL ++F+IN+ V +V      +     
Sbjct: 148 FLHSALVQSREIDHSKKGRVQEALNYYSIESTVALILSFIINLFVTTVF-----AKGFYG 202

Query: 195 EDQSNCKDLDLNKASFLLKNVLGSWSSKLF--AIALLASGQSSTITGTYAGQYVMQGFLD 252
            +Q+N   L +N   +L +   G +   L+   I LLA+GQSSTITGTYAGQ++M GFL+
Sbjct: 203 TEQANNIGL-VNAGQYLQEKYGGGFFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLN 261

Query: 253 LRLTPWIRNFLTRCLAIVPSLIVALIGGSSGAGKLII--IASMILSFELPFALIPLLKFT 310
           LRL  WIR  +TR  AIVP++IVAL+  +S     ++    +++ S ++PFALIPLL   
Sbjct: 262 LRLKKWIRALITRSCAIVPTMIVALVFDTSEDTLDVMNEWLNVLQSIQIPFALIPLLCLV 321

Query: 311 SCKTKMGMYANSTTISALTWLVGSLIMSINVYFLATGF 348
           S +  MG +     +  + WLV +L++ IN Y L   F
Sbjct: 322 SKEQIMGTFKIGPVLKVVAWLVAALVIIINGYLLVDFF 359


>GSVIVT01009387001 assembled CDS
          Length = 414

 Score =  221 bits (564), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/347 (39%), Positives = 201/347 (57%), Gaps = 14/347 (4%)

Query: 10  EYPRVPNFILWILAEIAIVACDIPEVIGTAFALNMLFR--IPIWIXXXXXXXXXXXXXXX 67
           EYP     +LW +AE+A++  DI EVIG+A A+ +L R  +P+W                
Sbjct: 24  EYPTWAGRLLWFMAELALIGADIQEVIGSAIAIKILSRGFLPLWAGVVITASDCFIFLFL 83

Query: 68  QRYGVRKLEFLIAFLVFTIAVCFFVELGYAKPAANEVLYGLFVPQLKGDGATGLAISLLG 127
           + YGVRKLE + A  + T+ + F    G AKP+  E+L G+ VP+L        A+ ++G
Sbjct: 84  ENYGVRKLEAVFAVFIATMGLSFAWMFGDAKPSGRELLIGVLVPKLSSK-TIRQAVGVVG 142

Query: 128 AMVMPHNLFLHSALVLSRKIPRSVRG-IKEACRYYLIESAFALAVAFLINVSVISVSGAV 186
            ++MPHN+FLHSALV SRKI    +G ++EA  YY IES  AL ++F+IN+ V +V    
Sbjct: 143 CVIMPHNVFLHSALVQSRKIDPHRKGRVQEALNYYSIESTVALLISFMINLFVTTVF--- 199

Query: 187 CNSSNLNAEDQSNCKDLDLNKASFLLKNVLGSWSSKLF--AIALLASGQSSTITGTYAGQ 244
             +       Q++   L +N   +L +   G     L+   I LLA+GQSSTITGTYAGQ
Sbjct: 200 --AKGFYGTKQADGIGL-VNAGQYLEEKYGGGVFPILYVWGIGLLAAGQSSTITGTYAGQ 256

Query: 245 YVMQGFLDLRLTPWIRNFLTRCLAIVPSLIVALIGGSSGAGKLII--IASMILSFELPFA 302
           ++M GFL+LRL  W+R  +TR  AIVP++IVAL+   S A   ++    +++ S ++PFA
Sbjct: 257 FIMGGFLNLRLKKWLRALITRSFAIVPTMIVALVFNRSEASLDVLNEWLNVLQSMQIPFA 316

Query: 303 LIPLLKFTSCKTKMGMYANSTTISALTWLVGSLIMSINVYFLATGFI 349
           LIPLL   S +  MG++     +  + W V +L++ IN Y L   F+
Sbjct: 317 LIPLLTLVSKEQVMGVFKVGPLLERVAWTVAALVIVINGYLLLDFFM 363


>GSVIVT01008828001 assembled CDS
          Length = 203

 Score =  165 bits (418), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 86/146 (58%), Positives = 107/146 (73%), Gaps = 9/146 (6%)

Query: 92  VELGYAKPAANE---------VLYGLFVPQLKGDGATGLAISLLGAMVMPHNLFLHSALV 142
           +  G+  P  NE         V+ G+F+P+LKG  ATG AI++LGA+VMPHNLFLHSALV
Sbjct: 34  IHNGWLFPWRNELCEASSLRCVIKGMFIPKLKGQCATGDAIAILGALVMPHNLFLHSALV 93

Query: 143 LSRKIPRSVRGIKEACRYYLIESAFALAVAFLINVSVISVSGAVCNSSNLNAEDQSNCKD 202
           LSRK+P SVRGI EACRY+LIES   L VAFLINV+V+S+S  VC++ NL+ E+   C D
Sbjct: 94  LSRKMPNSVRGINEACRYFLIESVLVLFVAFLINVAVVSMSDTVCSADNLSKENLDQCND 153

Query: 203 LDLNKASFLLKNVLGSWSSKLFAIAL 228
           L+LN ASFLLKNVLG  S  ++AI L
Sbjct: 154 LNLNSASFLLKNVLGGSSKVVYAIVL 179


>GSVIVT01025700001 assembled CDS
          Length = 732

 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 164/345 (47%), Gaps = 19/345 (5%)

Query: 1   KHLAEHCKAEYPRVPNFILWILAEIAIVACDIPEVIGTAFALNMLFRIPIW-IXXXXXXX 59
           + LA+ C  EY +    +L I  E++++A D+  ++G A  L+++F   ++         
Sbjct: 79  RDLAQICSDEYDKSTCMLLGIQTELSMIALDLTMILGIAHGLHLMFGADLFSCVFLTAID 138

Query: 60  XXXXXXXXQRYGVRKLEFLIAFLVFTIAVCFFVELGYAKPAANEVLYGLFVPQLKGDGAT 119
                         K +FL  ++V  + +C+ + +  + P     + G+   +  G+ A 
Sbjct: 139 AVLFPLFATLLENGKAKFLCIWMVGFVLLCYALGVLISLPEIPLSINGM-PTKFSGESAF 197

Query: 120 GLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEA--CRYYLIESAFALAVAFLINV 177
            L +SLLGA +MPHN +LHS++V   K  + +  + +A  C  ++    F  +  FL+N 
Sbjct: 198 AL-MSLLGANIMPHNFYLHSSIV---KRHQGLPNVSKAALCHSHIFAILFVFSGIFLLNY 253

Query: 178 SVISVSGAVCNSSNLNAEDQSNCKDLDLNKASFLLKNVLGS-WSSKLFAIALLASGQSST 236
            +++ +  V  S+ L          L    A  L+  V  S  +   F + L    Q + 
Sbjct: 254 VLMNAAANVFYSTGLVL--------LTFQDAMSLMDQVFRSPIAPVFFLLVLFLCNQITA 305

Query: 237 ITGTYAGQYVMQGFLDLRLTPWIRNFLTRCLAIVPSLIVALIGGSSGAGKLIIIASMILS 296
           +T    GQ V+   L + +  W+ +   R +AI+P+L      G+ GA +L++   ++++
Sbjct: 306 LTWDLGGQVVLHHLLRMDIPGWLHHATIRIIAIIPALYCVRTSGAEGAYQLLLFMQVMVA 365

Query: 297 FELPFALIPLLKFTSCKTKMGMYANSTTIS--ALTWLVGSLIMSI 339
             LP ++IPL++  S ++ MG+Y  S  +   A+  LVG L + I
Sbjct: 366 MFLPSSVIPLVRVASSRSIMGVYKVSQFVEFLAVVALVGMLGLKI 410