Jatropha Genome Database
- JcCA0075411.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0075411.30 - phase: 0
(241 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01027356001 assembled CDS 77 5e-15
GSVIVT01018606001 assembled CDS 77 8e-15
GSVIVT01018608001 assembled CDS 75 2e-14
GSVIVT01018607001 assembled CDS 75 2e-14
GSVIVT01018598001 assembled CDS 73 1e-13
GSVIVT01035108001 assembled CDS 72 2e-13
GSVIVT01018604001 assembled CDS 69 3e-12
GSVIVT01031165001 assembled CDS 64 9e-11
GSVIVT01015019001 assembled CDS 63 2e-10
GSVIVT01028041001 assembled CDS 61 6e-10
GSVIVT01031164001 assembled CDS 56 2e-08
GSVIVT01017687001 assembled CDS 55 2e-08
GSVIVT01037352001 assembled CDS 53 1e-07
GSVIVT01023135001 assembled CDS 53 1e-07
GSVIVT01012639001 assembled CDS 53 2e-07
GSVIVT01027359001 assembled CDS 47 7e-06
>GSVIVT01027356001 assembled CDS
Length = 561
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 86/162 (53%), Gaps = 22/162 (13%)
Query: 79 IKTVCNVTRYPVSCFTSISSLNASIKPDPQAIFNLSLQVSIKEVKNV------SSLLRSL 132
IK VC+VT YP SC+ S++ + S + P+ +FN+S++V++ E+ + +
Sbjct: 68 IKAVCDVTLYPDSCYNSLAPMVKSSQLKPEDLFNMSMEVALNELHRTFQRFSEHEGFKGI 127
Query: 133 NDVNSQAAINDCLSQFDESMSLLNDSMSAMEVGTGEKALTLKKISDIQTWISAAMTNQQT 192
D A++DC D A++ + +L D++TW+SAA T Q+T
Sbjct: 128 TDKMLAGALDDCYELLDL----------AIDNLNSSLSSSLDNFDDLKTWLSAAGTYQET 177
Query: 193 CLDGLEE--MGSTVLDEVKVKMENSKEFLSNNLAILANMQNL 232
C++G E + S+VL+ +K NS EF SN+LAI+ + L
Sbjct: 178 CINGFESGNLRSSVLEFLK----NSTEFSSNSLAIITEISKL 215
>GSVIVT01018606001 assembled CDS
Length = 201
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 86/163 (52%), Gaps = 13/163 (7%)
Query: 79 IKTVCNVTRYPVSCFTSISSLNASIKPDPQAIFNLSLQVSIKEVKNVSSLLRSLNDVNSQ 138
I+T C T YP C+TS+S+ + I+ P+ + + +L V++ ++ SSL+ + V S
Sbjct: 41 IRTSCGTTTYPKLCYTSLSAHASVIQTSPKLLADTALAVTLSTARSTSSLMSKM--VQSH 98
Query: 139 -------AAINDCLSQFDESMSLLNDSMSAMEVGTGEKALTLKKISDIQTWISAAMTNQQ 191
AA++DC+ + +S+ L +M M G + ++DIQTW+SAA+T++
Sbjct: 99 GLKPREVAAMHDCVEELSDSVDQLRKAMGEMTQIKGSNFGLM--MNDIQTWVSAALTDED 156
Query: 192 TCLDGLE--EMGSTVLDEVKVKMENSKEFLSNNLAILANMQNL 232
TC DG M + V+ ++ N SN L ++ + +L
Sbjct: 157 TCTDGFAGNAMNGNLKTTVRARVVNMAHMTSNALGLINSYASL 199
>GSVIVT01018608001 assembled CDS
Length = 202
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
Query: 79 IKTVCNVTRYPVSCFTSISSLNASIKPDPQAIFNLSLQVSIKEVKNVSSLLRSLNDVNSQ 138
I+T C T YP C+TS+S+ + I+ P+ + + +L V++ ++ SSL+ + V S
Sbjct: 42 IRTSCGTTTYPRLCYTSLSAHASVIQTSPKLLADTALAVTLSTARSTSSLMSKM--VQSH 99
Query: 139 -------AAINDCLSQFDESMSLLNDSMSAMEVGTGEKALTLKKISDIQTWISAAMTNQQ 191
AA++DC+ + +S+ L +M M G + + DIQTW+S A+T++
Sbjct: 100 GLKPREVAAMHDCVEELSDSVDQLRRAMGEMTQIKGSNFGLM--MDDIQTWVSTALTDED 157
Query: 192 TCLDGLE--EMGSTVLDEVKVKMENSKEFLSNNLAILANMQNL 232
TC DG M + V+ ++ N SN L ++ + +L
Sbjct: 158 TCTDGFAGNAMNGNLKTTVRARIVNMAHMTSNALGLINSYASL 200
>GSVIVT01018607001 assembled CDS
Length = 202
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
Query: 79 IKTVCNVTRYPVSCFTSISSLNASIKPDPQAIFNLSLQVSIKEVKNVSSLLRSLNDVNSQ 138
I+T C T YP C+TS+S+ + I+ P+ + + +L V++ ++ SSL+ + V S
Sbjct: 42 IRTSCGTTTYPRLCYTSLSAHASVIQTSPKLLADTALAVTLSTARSTSSLMSKM--VQSH 99
Query: 139 -------AAINDCLSQFDESMSLLNDSMSAMEVGTGEKALTLKKISDIQTWISAAMTNQQ 191
AA++DC+ + +S+ L +M M G + + DIQTW+S A+T++
Sbjct: 100 GLKPREVAAMHDCVEELSDSVDQLRRAMGEMTQIKGSNFGLM--MDDIQTWVSTALTDED 157
Query: 192 TCLDGLE--EMGSTVLDEVKVKMENSKEFLSNNLAILANMQNL 232
TC DG M + V+ ++ N SN L ++ + +L
Sbjct: 158 TCTDGFAGNAMNGNLKTTVRARIVNMAHMTSNALGLINSYASL 200
>GSVIVT01018598001 assembled CDS
Length = 198
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 11/167 (6%)
Query: 79 IKTVCNVTRYPVSCFTSISSLNASIKPDPQAIFNLSLQVSIKEVKNVSSLLRSLNDVNSQ 138
IK C+ TRYP C S+S ++I+ P+ + + +L VS+ + ++ + + L +
Sbjct: 36 IKAKCSATRYPALCVQSLSVYASTIQKSPKQLAHTALTVSLAKAQSAKAFVSKLGKIKGM 95
Query: 139 AA-----INDCLSQFDESMSLLNDSMSAME-VGTGEKALTLKKISDIQTWISAAMTNQQT 192
A + DCL + ++S+ L+ S+ +E G + L +S++ TW+SAA+T+ T
Sbjct: 96 KARELEAVQDCLEEMNDSIDRLSRSVQELEEAGKSKGQDFLWHMSNVDTWVSAALTDDNT 155
Query: 193 CLDGLEEMGSTVLDEVKVKMENSKEFLSNNLAILANMQNLLEKFDLK 239
C+DG G + VK + +L + +N L+ +F K
Sbjct: 156 CVDGF--AGRALDGRVKASIRG---WLVTVAQVTSNALALVNQFAAK 197
>GSVIVT01035108001 assembled CDS
Length = 1281
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 87/159 (54%), Gaps = 7/159 (4%)
Query: 79 IKTVCNVTRYPVSCFTSISSLNASIKPDPQAIFNLSLQVSIKEVKNV---SSLLRSL-ND 134
I+ +C T Y +C S++S A+ DP+ + + QV+I ++ + S+ LR L D
Sbjct: 47 IQAICQPTDYKEACVNSLTSAKANTS-DPKELVRTAFQVAINQISSALQNSTTLRDLEKD 105
Query: 135 VNSQAAINDCLSQFDESMSLLNDSMSAMEVGTGEKALTLKKISDIQTWISAAMTNQQTCL 194
++ A+ +C D ++ L +S + ++G + + + D++ W+S A+T Q+TCL
Sbjct: 106 PRTKGALENCHELMDYAIDDLRNSFN--KLGVFDISKIDDYVEDLKIWLSGALTYQETCL 163
Query: 195 DGLEEMGSTVLDEVKVKMENSKEFLSNNLAILANMQNLL 233
DG E +++K ++++ E SN LA++ + ++L
Sbjct: 164 DGFENTTGDAGEKMKALLKSAGELTSNGLAMIDEISSVL 202
>GSVIVT01018604001 assembled CDS
Length = 187
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 79 IKTVCNVTRYPVSCFTSISSLNASIKPDPQAIFNLSLQVSIKEVKNVSSLLRSL---NDV 135
I+T C T YP CFTS+S+ I+ P+ + + +L V++ ++ SS++ +L + +
Sbjct: 40 IRTSCGTTIYPRLCFTSLSAHANVIQTSPRLLADTALSVTLSTARSTSSVMSNLLLSHGL 99
Query: 136 NSQ--AAINDCLSQFDESMSLLNDSMSAMEVGTGEKALTLKKISDIQTWISAAMTNQQTC 193
+ A+ DC+ + +S+ L +M M G + ++DIQTW+SAA+T + TC
Sbjct: 100 KPREVVAMKDCVEELSDSVDQLRKAMGEMNQIKGSNFGLI--MNDIQTWVSAALTYEDTC 157
Query: 194 LDGLE--EMGSTVLDEVKVKMENSKEFL 219
DG M + V+ ++ + FL
Sbjct: 158 TDGFAGNTMDGKLKKAVRTRIRANLSFL 185
>GSVIVT01031165001 assembled CDS
Length = 769
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 9/165 (5%)
Query: 79 IKTVCNVTRYPVSCFTSISSLNASIKPDP----QAIFNLSLQVSIKEVKNVSSLLRSLN- 133
I+ +C T Y +C S++S A DP QA F +++ KN S+LL+ LN
Sbjct: 59 IQAICQPTDYKDACVNSLTS-KAGNTTDPKDLVQAAFASAMEHLSAAAKN-STLLQELNK 116
Query: 134 DVNSQAAINDCLSQFDESMSLLNDSMSAMEVGTGEKALTLKKISDIQTWISAAMTNQQTC 193
D + A+ +C + ++ L S + +VG + + I+DI+ W+SA +T Q+TC
Sbjct: 117 DPRASQALQNCEDLVNYAIDDLKKSFN--QVGDFDYSKMDNIIADIKIWLSAVITYQETC 174
Query: 194 LDGLEEMGSTVLDEVKVKMENSKEFLSNNLAILANMQNLLEKFDL 238
LDG E ++++ ++ S E SN LAI+ + ++L L
Sbjct: 175 LDGFENTTGDAGEKMRQILKTSMELSSNGLAIVGEVSSILSNLQL 219
>GSVIVT01015019001 assembled CDS
Length = 537
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 20/171 (11%)
Query: 79 IKTVCNVTRYPVSCFTSISSLNASIK--PDPQAIFNLSLQVSIKEVKNVSSLLRSL---N 133
IK C T YP CFT++SS A+ K I +++ ++ V + S +++L
Sbjct: 62 IKNACTNTLYPSLCFTTLSSAPATSKNTTTLHHILEIAVNATVSSVMDSGSDIKALFTYQ 121
Query: 134 DVNSQA--AINDCLSQFDESMSLLN---DSMSAMEVGTGEKALTLKKISDIQTWISAAMT 188
D+NSQ A+NDC+ D+++ L D + A G+ + ++++T +SAAMT
Sbjct: 122 DLNSQEKNALNDCMEMTDQTLYELGQAIDDLHAFPPSIGDPH---RLYTNLKTLLSAAMT 178
Query: 189 NQQTCLDG---LEEMGSTVLDEVKVKMENS----KEFLSNNLAILANMQNL 232
N+ TC+DG LEE S +K +++ +SN LAI+ M+ +
Sbjct: 179 NENTCIDGFTDLEEADSESQKGLKGHLQSVLTPISGMISNCLAIIKYMETI 229
>GSVIVT01028041001 assembled CDS
Length = 549
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 83 CNVTRYPVSCFTSISSL-NASIKPDPQAIFNLSLQVSIKEVK----NVSSLLRSLNDVNS 137
C T YP C +++S+ + + K P+ I ++ ++ EVK N S + R L ++N+
Sbjct: 66 CEGTLYPELCVSTLSTFPDLASKTVPEVI-AATVSHTVGEVKLSASNCSGIRRKLKNLNT 124
Query: 138 --QAAINDCLSQFDESMSLLNDSMSAMEVGTGEKALTLKKISDIQTWISAAMTNQQTCLD 195
AINDCL D +++ L ++S + K D+QT +S ++TN TCLD
Sbjct: 125 LEGRAINDCLELHDCTIAQLQSTISDLSHNNSPA----KHYHDLQTLLSGSITNLYTCLD 180
Query: 196 GLEEMGSTVLDEVKVKMENSKEFLSNNLAILANMQNLLEKF 236
G + ++ + N +SN+LA+L + + ++
Sbjct: 181 GFAYSKKHIRSSIEGPLRNISHHVSNSLAMLKKIPGIFPEY 221
>GSVIVT01031164001 assembled CDS
Length = 571
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 91 SCFTSISSLNASIKP-DPQAIFNLSLQVSIKEVKNVSSLLRSLNDVNS----QAAINDCL 145
SC +SI + S+ P P +I +L+ ++ E + ++ N ++S Q AI DC
Sbjct: 83 SCVSSIHNELESMGPRSPSSILTAALKTTLNEARIAVQMVTRFNALSSSYREQIAIEDCK 142
Query: 146 SQFDESMSLLNDSMSAME-VGTGEKALTLKKISDIQTWISAAMTNQQTCLDGLEEMGSTV 204
D S+S L S+ M+ + G + ++ +++ W+SAA++NQ TCL+G E +
Sbjct: 143 ELLDFSVSELAWSLLEMKSIRAG--STNVQSEGNLKAWLSAALSNQDTCLEGFEGTDRRI 200
Query: 205 LDEVKVKMENSKEFLSNNLAILANMQNLLEK 235
++ ++ + +SN LA+ + +L K
Sbjct: 201 ESFIRGSLKQVTQLISNVLAMYVQLHSLPFK 231
>GSVIVT01017687001 assembled CDS
Length = 576
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 79 IKTVCNVTRYPVSCFTSISSLNASIKPDPQAIFNLSLQVSIKEVKNV----SSLLRSLND 134
+ +C+ T Y C +S +L + P+ ++ +++KEVK S+ + N
Sbjct: 51 VAAICSPTDYKQQCISSFQTLANNHSATPKDFLMAAIDITMKEVKEAIGKSESIGLAGNS 110
Query: 135 VNSQA-AINDCLSQFDESMSLLNDSMSAMEVGTGEKALTL--KKISDIQTWISAAMTNQQ 191
Q A DC ++ L S S + G+ A+ + D++ W+SA ++ QQ
Sbjct: 111 SGRQKMATEDCQDLLQLAIGELQASFSMV----GDAAMHTINDRAQDLKNWLSAVISYQQ 166
Query: 192 TCLDGLEEMGSTVLDEVKVKMENSKEFLSNNLAILANMQNLLEKFDLKM 240
+C+DG +E V ++ + N+ + SN LAI++ + +L F++ +
Sbjct: 167 SCMDGFDET-PEVKSAIQNGLLNATQLTSNALAIVSEISAILTSFNIPL 214
>GSVIVT01037352001 assembled CDS
Length = 415
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 19/154 (12%)
Query: 79 IKTVCNVTRYPVSC--FTSISSLNASIKPDPQAIFNLSLQVSIKEV----KNVSSLLRSL 132
+K C+ T +P C F S + ++ IK N+S+Q++++ + SL
Sbjct: 24 VKPWCSQTPHPQPCEYFLSQKTDHSLIKQKSD-FLNISMQLALERAMIAHGDTFSLGSKC 82
Query: 133 NDVNSQAAINDCLSQFDESMSLLNDSMSAMEVGTGEKALTLKKISDIQTWISAAMTNQQT 192
+ +AA NDCL ++ ++ LN ++ + T +D QTW+S A+TN QT
Sbjct: 83 RNEREKAAWNDCLELYEHTILKLNKTLDSN---------TRCTQADAQTWLSTALTNLQT 133
Query: 193 CLDGLEEMGSTVLDEVKVKMENS-KEFLSNNLAI 225
C DG ++G V D V M N+ + +SN L+I
Sbjct: 134 CQDGFIDLG--VSDYVLPLMSNNVSKLISNTLSI 165
>GSVIVT01023135001 assembled CDS
Length = 527
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 107 PQAIFNLSLQVSIKEVKN----VSSLLRSLNDVNSQAAINDCLSQFDESMSLLNDSMSAM 162
P + F SL+ +I ++ VS + ND AI+DCL D + L+ S+SA+
Sbjct: 47 PSSAFISSLKSTIDVLRGTMSVVSQFTKVFNDFRLSNAISDCLELLDFAADDLSWSLSAI 106
Query: 163 EVGTGEKALTLKKISDIQTWISAAMTNQQTCLDGL 197
+ G+ T SD++TW+S+ TNQ TC++G
Sbjct: 107 QNPKGKDNGTGDLGSDLKTWLSSTFTNQDTCIEGF 141
>GSVIVT01012639001 assembled CDS
Length = 503
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 130 RSLNDVNSQAAINDCLSQFDESMSLLNDSMSAMEVGTGEKALTLKKISDIQTWISAAMTN 189
R +ND QAA++DC+ D SM + DS+ A+ G T+ +D W+S +TN
Sbjct: 90 RRMNDPRDQAALSDCVELMDLSMGRIRDSVEALGRG------TVDSHADAHAWLSGVLTN 143
Query: 190 QQTCLDGL 197
TC DG+
Sbjct: 144 YITCTDGI 151
>GSVIVT01027359001 assembled CDS
Length = 567
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 82 VCNVTRYPVSCFTSISSLNAS-IKPDPQAIFNLSLQVSIKEVKNVSSLLRSLNDVNSQ-- 138
C T YP C + +S+ +S ++PD F S++ +K+ + +S L+ N +
Sbjct: 35 ACKATLYPKLCRSILSTFRSSPVRPDAYGQF--SVKQCLKQARRMSELIGHYLTHNQRWP 92
Query: 139 ------AAINDCLSQFDESMSLLNDSMSAMEVGTGE----KALTLKKISDIQTWISAAMT 188
A++DC +S LN + ++ +GE + +T + + ++T +S +T
Sbjct: 93 MSHAEAGALDDC-----RQLSELN--VDYLQTISGELKSAELMTDELVERVRTLLSGIVT 145
Query: 189 NQQTCLDGLEEMGSTVLDEVKVKMENSKEFLSNNLAILA 227
NQQTC DGL + ++++ + + N+ + S +L +++
Sbjct: 146 NQQTCYDGLVDSRNSMVAALLAPLSNANQLYSVSLGLVS 184