Jatropha Genome Database

JcCA0071051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0071051.10 + phase: 0 
         (425 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01014092001 assembled CDS                                       697   0.0  
GSVIVT01021312001 assembled CDS                                       577   e-165
GSVIVT01031857001 assembled CDS                                       208   4e-54
GSVIVT01011634001 assembled CDS                                       204   6e-53
GSVIVT01020754001 assembled CDS                                       204   9e-53
GSVIVT01021260001 assembled CDS                                       186   1e-47
GSVIVT01020215001 assembled CDS                                       177   7e-45
GSVIVT01007789001 assembled CDS                                       177   1e-44
GSVIVT01013121001 assembled CDS                                       124   8e-29

>GSVIVT01014092001 assembled CDS
          Length = 880

 Score =  697 bits (1799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/414 (82%), Positives = 366/414 (88%), Gaps = 7/414 (1%)

Query: 1   MSGNRCNGNPNHYTSRTQRLLRERALKRSNKAAHSNEVTDNHRVTEQCETDSRFREGDNS 60
           M GN+ NG  +  TSR +RLLR+R L++S++A+H NE  D +R TE  E      EGDN 
Sbjct: 1   MPGNKYNGISSVPTSRVERLLRDRELRKSSRASHPNEANDTNRGTEVLE-----HEGDNL 55

Query: 61  NNSYIEQYLEGAVAATRTPSEGCEKQDGRPFFKQRLLVVANRLPVSAVRRGEDSWSLEIS 120
            +S++EQ+ E A A     SE CEKQ+ RP  +QRLLVVANRLPVSA+RRGE+SWSLEIS
Sbjct: 56  GSSHVEQHSETA-AIRGVLSEECEKQETRPA-RQRLLVVANRLPVSAIRRGEESWSLEIS 113

Query: 121 AGGLVSALLGVKEFEARWIGWAGVNVPDEIGQRALTKALAEKRCIPVFLDEEIVHQYYNG 180
           AGGLVSALLGVKEFEARWIGWAGVNVPDE GQRALTKALAEK CIPVFLDE+IVHQYYNG
Sbjct: 114 AGGLVSALLGVKEFEARWIGWAGVNVPDEAGQRALTKALAEKMCIPVFLDEDIVHQYYNG 173

Query: 181 YCNNILWPLFHYLGLPQEDRLATTRSFQSQFDAYKKANQMFADVVNEHYEEGDVVWCHDY 240
           YCNNILWPLFHYLGLPQEDRLATTRSFQSQF AYKKANQMFADVVN+HYEEGDVVWCHDY
Sbjct: 174 YCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNKHYEEGDVVWCHDY 233

Query: 241 HLMFLPKCLKEYNGNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYAR 300
           HLMFLPKCLK+YN  MKVGWFLHTPFPSSEIHRTLPSRSELL SVLAADLVGFHTYDYAR
Sbjct: 234 HLMFLPKCLKKYNSEMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYAR 293

Query: 301 HFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALELPQVQDHIKELKERF 360
           HFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDS RFIRAL+ PQVQD I ELK  F
Sbjct: 294 HFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSHRFIRALDAPQVQDRINELKRTF 353

Query: 361 SGRKVMLGVDRLDMIKGIPQKILAFEKFLEENSQWRDKVVLLQIAVPTRTDVPE 414
           +GRKVMLGVDRLDMIKGIPQKILAFEKFLEENS+W+ KVVLLQIAVPTRTDVPE
Sbjct: 354 TGRKVMLGVDRLDMIKGIPQKILAFEKFLEENSEWQQKVVLLQIAVPTRTDVPE 407


>GSVIVT01021312001 assembled CDS
          Length = 5984

 Score =  577 bits (1488), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 295/366 (80%), Positives = 320/366 (87%), Gaps = 4/366 (1%)

Query: 1   MSGNRCNGNPNHYTSRTQRLLRERALKRSNKAAH-SNEVTDNHRVTEQCETDSRFREGDN 59
           M GNR + N +   +R +RLLRER L++ N++ + +NEV D +R  +    DS   EGDN
Sbjct: 1   MPGNRYSFNSSTPRTRLERLLRERELRKFNQSFNLTNEVKDGNREGDPFGNDSA-NEGDN 59

Query: 60  SNNSYIEQYLEGAVAATRTPSEGCEKQDGRPFFKQRLLVVANRLPVSAVRRGEDSWSLEI 119
                 E++LEG  A  RT  +  E+QD RP  KQRLLVVANRLPVSAVR+GEDSW LEI
Sbjct: 60  GGVPNEEEFLEGFTAG-RTVGDAFERQDARPS-KQRLLVVANRLPVSAVRKGEDSWQLEI 117

Query: 120 SAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQRALTKALAEKRCIPVFLDEEIVHQYYN 179
           S GGLVSALLGVKEFEARWIGWAGVNVPDEIGQ++L KALAEKRCIPVFLDEEIVHQYYN
Sbjct: 118 SVGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKSLAKALAEKRCIPVFLDEEIVHQYYN 177

Query: 180 GYCNNILWPLFHYLGLPQEDRLATTRSFQSQFDAYKKANQMFADVVNEHYEEGDVVWCHD 239
           GYCNN+LWPLFHYLGLPQEDRLATTRSFQSQFDAYKKANQMFADVVNEHY+ GDVVWCHD
Sbjct: 178 GYCNNMLWPLFHYLGLPQEDRLATTRSFQSQFDAYKKANQMFADVVNEHYQNGDVVWCHD 237

Query: 240 YHLMFLPKCLKEYNGNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYA 299
           YHLMFLPKCLKEYN  MKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYA
Sbjct: 238 YHLMFLPKCLKEYNIEMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYA 297

Query: 300 RHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALELPQVQDHIKELKER 359
           RHFVSACTRILGLEGTPEGVEDQG+LTRVAAFPIGIDS+RFIRALELPQVQ+HIKELKER
Sbjct: 298 RHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFIRALELPQVQNHIKELKER 357

Query: 360 FSGRKV 365
           F+GRKV
Sbjct: 358 FAGRKV 363


>GSVIVT01031857001 assembled CDS
          Length = 577

 Score =  208 bits (529), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 119/323 (36%), Positives = 180/323 (55%), Gaps = 58/323 (17%)

Query: 93  KQRLLVVANRLPVSAVRRGED-SWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIG 151
           + RL++VAN+LPV A RR +D  W    +   L   LL +KE              +E+ 
Sbjct: 58  QDRLIIVANQLPVKANRRADDRGWVFSWNEDSL---LLQLKE--------------EEVS 100

Query: 152 QRALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQF 211
           Q  L       +C+P FL  +++ ++Y+G+C  +LWPLFHY+     D     R  +S +
Sbjct: 101 QILLETF----KCVPTFLPHDVLEKFYHGFCKKLLWPLFHYMLPFSADH--GGRFDRSMW 154

Query: 212 DAYKKANQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNGNMKVGWFLHTPFPSSE 270
           +AY  AN++F+  V E    + D VW HDYHLM LP  L+ +   +++G+FLH+PFPSSE
Sbjct: 155 EAYVWANKLFSQKVIEAINPDDDYVWIHDYHLMVLPTFLRRHFNQLRMGFFLHSPFPSSE 214

Query: 271 IHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GVEDQGRLT 326
           I+RTLP R E+L+++L +DL+GFHT+DYARHF+S C+R+LGLE   +    G+E  GR  
Sbjct: 215 IYRTLPVREEILKALLNSDLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTV 274

Query: 327 RVAAFPIGIDSERFIRALELPQVQDHIKELKERFSGRKVMLGVDRLDMIKGIPQKILAFE 386
            +   P+GI   R    ++L   +                             +K+LA E
Sbjct: 275 GIKIMPVGIHMGRIASVMKLADKE-----------------------------KKLLAME 305

Query: 387 KFLEENSQWRDKVVLLQIAVPTR 409
           + L+++S+W+ K VL+QIA P R
Sbjct: 306 QLLQQHSKWQGKTVLVQIANPAR 328


>GSVIVT01011634001 assembled CDS
          Length = 702

 Score =  204 bits (519), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 130/348 (37%), Positives = 197/348 (56%), Gaps = 33/348 (9%)

Query: 73  VAATRTPSEG-CEKQDGRPFFKQRLLVVANRLPVSAVRRGEDS--WSLEISAGGLVSAL- 128
           +A+  +PS G   ++  R   + RL++VAN+LP+ A R+ E++  W        L+  L 
Sbjct: 12  LASGESPSFGRMSRRIPRIMTRDRLIIVANQLPIRAQRKSENNNGWIFSWDENSLLLQLK 71

Query: 129 --LGVKEFEARWIGWAGVNV-PDEIGQRALTKALAEK-RCIPVFLDEEIVHQYYNGYCNN 184
             LG  E E  ++G     + P E  Q  +++ L E  +C+P FL  ++  +YY+G+C  
Sbjct: 72  DGLGDDEIEVIYVGCLKEEIHPCE--QDEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQ 129

Query: 185 ILWPLFHYLGLPQEDRLATTRSFQSQFDAYKKANQMFADVVNEHYE-EGDVVWCHDYHLM 243
            LWPLFHY+ LP    L   R  +S + AY   N++FAD + E    E D VW HDYHLM
Sbjct: 130 QLWPLFHYM-LPLSPDLGG-RFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLM 187

Query: 244 FLPKCLKEYNGNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFV 303
            LP  L++    +K+G+FLH+PFPSSEI+RTLP R ELLR   A  ++G  +Y+  R ++
Sbjct: 188 VLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIREELLR---ALRMLGL-SYESKRGYI 243

Query: 304 SACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALELPQVQDHIKELKERF--S 361
                         G+E  GR   +   P+GI   +    L LP+ ++ + EL ++F   
Sbjct: 244 --------------GLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEEKVAELIKQFCDQ 289

Query: 362 GRKVMLGVDRLDMIKGIPQKILAFEKFLEENSQWRDKVVLLQIAVPTR 409
            R ++LGVD +D+ KGI  K+LA E+ L ++ +W+ KVVL+QIA P R
Sbjct: 290 DRIMLLGVDDMDIFKGISLKLLAMEQLLVQHPEWQGKVVLVQIANPAR 337


>GSVIVT01020754001 assembled CDS
          Length = 782

 Score =  204 bits (518), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 99/215 (46%), Positives = 146/215 (67%), Gaps = 5/215 (2%)

Query: 200 RLATTRSFQSQFDAYKKANQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNGNMKV 258
           +L   R  +S ++AY  AN++F+  V E    + D VW HDYHLM LP  L+ +   +++
Sbjct: 93  QLKEGRFDRSMWEAYVLANKLFSQKVIEVINPDDDYVWIHDYHLMVLPTFLRRHFNQLRM 152

Query: 259 GWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE- 317
           G+FLH+PFPSSEI+RTLP R E+L+++L +DL+GFHT+DYARHF+S C+R+LGLE   + 
Sbjct: 153 GFFLHSPFPSSEIYRTLPVREEILKALLNSDLIGFHTFDYARHFLSCCSRMLGLEYQSKR 212

Query: 318 ---GVEDQGRLTRVAAFPIGIDSERFIRALELPQVQDHIKELKERFSGRKVMLGVDRLDM 374
              G+E  GR   +   P+GI   R    ++L   Q  + ELK++F G+ V+LGVD +D+
Sbjct: 213 GYIGLEYYGRTVGIKIMPVGIHMGRIASVMKLADKQKKVGELKQQFEGKTVLLGVDDMDI 272

Query: 375 IKGIPQKILAFEKFLEENSQWRDKVVLLQIAVPTR 409
            KGI  K+LA E+ L+++S+W+ K VL+QIA P R
Sbjct: 273 FKGINLKLLAMEQLLQQHSKWQGKAVLVQIANPAR 307


>GSVIVT01021260001 assembled CDS
          Length = 784

 Score =  186 bits (473), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 96/222 (43%), Positives = 142/222 (63%), Gaps = 5/222 (2%)

Query: 193 LGLPQEDRLATTRSFQSQFDAYKKANQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKE 251
           L L  +D L       S ++AY  AN++F+  V E    E D VW HDYHLM LP  L+ 
Sbjct: 89  LLLQLKDGLPDDMEVLSLWEAYVSANKIFSQRVIEVLNPEDDYVWIHDYHLMVLPTFLRR 148

Query: 252 YNGNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILG 311
               +++G+FLH+PFPSSEI+RTLP R E+L+++L +DL+GFHT+DYARHF+S C+R+LG
Sbjct: 149 RFNRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNSDLIGFHTFDYARHFLSCCSRMLG 208

Query: 312 LEGTPE----GVEDQGRLTRVAAFPIGIDSERFIRALELPQVQDHIKELKERFSGRKVML 367
           LE   +    G+E  GR   +   P+G+   +    L     +  + ELK++F G+ V+L
Sbjct: 209 LEYQSKRGYIGLEYYGRTVGIKIMPVGVHMGQIESVLRFADKEWRVGELKQQFEGKTVLL 268

Query: 368 GVDRLDMIKGIPQKILAFEKFLEENSQWRDKVVLLQIAVPTR 409
           GVD +D+ KG+  K+LA E+ L ++ +W+ + VL+QIA P R
Sbjct: 269 GVDDMDIFKGVNLKLLAMEQMLTQHPKWQGRAVLVQIANPAR 310


>GSVIVT01020215001 assembled CDS
          Length = 643

 Score =  177 bits (450), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 167/331 (50%), Gaps = 67/331 (20%)

Query: 90  PFFKQRLLVVANRLPVSAVR-RGEDSWSLEISAGGLVSALLGVK-----EFEARWIGWAG 143
           P    R ++VAN LP+ A R +    W   +    L   LL +K     E E  ++G   
Sbjct: 28  PRVMTRKIIVANMLPLHAQRDKVTAKWCFSLDEDAL---LLHLKDGFSPETEVIYVGSLK 84

Query: 144 VNVPDEIGQRALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLAT 203
           V +     +    K L +  C+P FL  ++  ++Y+G+C   LWPLF             
Sbjct: 85  VEIDASEQEEVAQKLLEDFNCVPTFLPHDLHKKFYHGFCKQQLWPLF------------- 131

Query: 204 TRSFQSQFDAYKKANQMFADVVNEHYEEGDVVWCHDYHLMFLPKCLKEYNGNMKVGWFLH 263
                                   HY               LP  +K ++  +K+G+FLH
Sbjct: 132 ------------------------HY--------------MLP--MKRFH-RVKLGFFLH 150

Query: 264 TPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GV 319
           +PFPSSEI+RTLP R E+LR +L  DL+GF T+DYARHF+S C+R+LGL+   +    G+
Sbjct: 151 SPFPSSEIYRTLPVRDEILRGLLNCDLIGFQTFDYARHFLSCCSRMLGLDYESKRGHIGL 210

Query: 320 EDQGRLTRVAAFPIGIDSERFIRALELPQVQDHIKELKERFSGRKVMLGVDRLDMIKGIP 379
           +  GR   +   P+G+   R    L L      IKE++++F G+K++LGVD +D+ KGI 
Sbjct: 211 DYSGRTVYIKILPVGVHMGRLESVLNLHSTSAKIKEIQKQFEGKKLILGVDDMDIFKGIS 270

Query: 380 QKILAFEKFLEENSQWRDKVVLLQIAVPTRT 410
            K LA E+ L+++ + + K+VL+QI  P R+
Sbjct: 271 LKFLAVEQLLQQHPELQGKLVLVQIVNPARS 301


>GSVIVT01007789001 assembled CDS
          Length = 717

 Score =  177 bits (448), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/322 (34%), Positives = 164/322 (50%), Gaps = 67/322 (20%)

Query: 99  VANRLPVSAVRR-GEDSWSLEISAGGLVSALLGVK-----EFEARWIGWAGVNVPDEIGQ 152
           VAN LP+ A +      W        L   LL +K     E +  ++G   V+V     +
Sbjct: 41  VANFLPLLAQKDLNTGRWCFSFDEDAL---LLQMKDGFSSETDVVYVGSLKVDVDTSEQE 97

Query: 153 RALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFD 212
               + LAE  C+P FL  ++  ++Y+G+C   LWPL                       
Sbjct: 98  EVAERLLAEFNCVPTFLPPDLQKKFYHGFCKQYLWPL----------------------- 134

Query: 213 AYKKANQMFADVVNEHYEEGDVVWCHDYHLMFLPKCLKEYNGNMKVGWFLHTPFPSSEIH 272
                                      +H M LP  +K +   +K+G+FLH+PFPSSEI+
Sbjct: 135 ---------------------------FHYM-LP--IKRFY-RVKLGFFLHSPFPSSEIY 163

Query: 273 RTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GVEDQGRLTRV 328
           RTLP R ++L+++L ADLVGFHT+DYARHF+S C+R+LGL    +    G+E  GR   V
Sbjct: 164 RTLPVRDDILKALLNADLVGFHTFDYARHFLSCCSRMLGLNYESKRGHIGLEYFGRTVYV 223

Query: 329 AAFPIGIDSERFIRALELPQVQDHIKELKERFSGRKVMLGVDRLDMIKGIPQKILAFEKF 388
              P+GI   +   AL LP     +KE++E+F G+K++LGVD +D+ KG+  K+LA E  
Sbjct: 224 KILPVGIHMGQLESALNLPSTSIKVKEIQEQFKGKKIILGVDDMDIFKGLSLKLLAMEHL 283

Query: 389 LEENSQWRDKVVLLQIAVPTRT 410
           L+   + R ++VL+QI  P R+
Sbjct: 284 LQHYEELRGELVLVQIVNPARS 305


>GSVIVT01013121001 assembled CDS
          Length = 223

 Score =  124 bits (311), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 76/197 (38%), Positives = 113/197 (57%), Gaps = 11/197 (5%)

Query: 93  KQRLLVVANRLPVSAVRRGEDS--WSLEISAGGLVSAL---LGVKEFEARWIGWAGVNVP 147
           + R+++V N+LP+ A R  + S  W        L+  L   LG ++ E  ++G     + 
Sbjct: 31  QDRMIIVGNQLPLRAHRSSDGSGEWCFSWDEDSLLLQLKDGLG-EDVEVLYVGCLREQI- 88

Query: 148 DEIGQRALTKALAEK-RCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRS 206
           D   Q  + + L E  +C+P F+  E+  ++Y+G+C   LWPLFHY+ LP    L   R 
Sbjct: 89  DPSEQDDVAQTLLETFKCVPAFIPPELFSKFYHGFCKQQLWPLFHYM-LPLSPDLGG-RF 146

Query: 207 FQSQFDAYKKANQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNGNMKVGWFLHTP 265
            +S + AY   N++FAD V E    + D VW HDYHLM LP  L++    +K+G+FLH+P
Sbjct: 147 DRSLWQAYVSVNKIFADKVMEVITPDEDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSP 206

Query: 266 FPSSEIHRTLPSRSELL 282
           FPSSEI+RTLP+   LL
Sbjct: 207 FPSSEIYRTLPALPLLL 223