Jatropha Genome Database

JcCA0066941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0066941.10 + phase: 0 /partial
         (189 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01011104001 assembled CDS                                       368   e-102
GSVIVT01017883001 assembled CDS                                       351   1e-97
GSVIVT01036988001 assembled CDS                                       244   2e-65
GSVIVT01007281001 assembled CDS                                       239   4e-64
GSVIVT01009710001 assembled CDS                                       229   4e-61
GSVIVT01028842001 assembled CDS                                       218   1e-57

>GSVIVT01011104001 assembled CDS
          Length = 448

 Score =  368 bits (944), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 176/189 (93%), Positives = 184/189 (97%)

Query: 1   SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
           SLGLVELEILQRSG+S EKKQAA I+PVVQKQHQLLVTLLLCNACAMEALPI LDKIFHP
Sbjct: 2   SLGLVELEILQRSGTSAEKKQAAAILPVVQKQHQLLVTLLLCNACAMEALPIYLDKIFHP 61

Query: 61  FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
           FVA+LLSVTFVLAFGE+IPQAIC+RYGL VGANFVWLVRILMIICYPIA+PIGK+LDA L
Sbjct: 62  FVAILLSVTFVLAFGEIIPQAICTRYGLSVGANFVWLVRILMIICYPIAFPIGKVLDAVL 121

Query: 121 GHSDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFS 180
           GH+DALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFS
Sbjct: 122 GHNDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFS 181

Query: 181 LDVNSKLDW 189
           LDVNSKLDW
Sbjct: 182 LDVNSKLDW 190


>GSVIVT01017883001 assembled CDS
          Length = 474

 Score =  351 bits (900), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 170/189 (89%), Positives = 181/189 (95%)

Query: 1   SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
           SLG V+LEILQRSG+S EKKQAA I+PVVQKQHQLLVTLLLCNAC+MEALP+ LDK+F+ 
Sbjct: 60  SLGRVDLEILQRSGTSDEKKQAAAILPVVQKQHQLLVTLLLCNACSMEALPLYLDKLFNQ 119

Query: 61  FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
           FVA++LSVTFVLAFGEVIPQAICSRYGL VGANFVWLVRILMIICYPIAYPIGKILD  L
Sbjct: 120 FVAIVLSVTFVLAFGEVIPQAICSRYGLSVGANFVWLVRILMIICYPIAYPIGKILDWVL 179

Query: 121 GHSDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFS 180
           GH++ALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFS
Sbjct: 180 GHNEALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFS 239

Query: 181 LDVNSKLDW 189
           LDVNSKLDW
Sbjct: 240 LDVNSKLDW 248


>GSVIVT01036988001 assembled CDS
          Length = 402

 Score =  244 bits (623), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 118/189 (62%), Positives = 151/189 (79%), Gaps = 1/189 (0%)

Query: 1   SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
           S+ LV+LE+L +SG+  ++K A  I+PVV+KQH LL TLL+ NA AMEALPI LD +   
Sbjct: 10  SMSLVDLEVLAKSGTPKDRKHAEKILPVVKKQHLLLCTLLIFNAAAMEALPIFLDGLITA 69

Query: 61  FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
           + A+L+SVT +L FGE+IPQ++CSRYGL +GA    +VRIL+ ICYP+AYPI K+LD  L
Sbjct: 70  WGAILISVTLILLFGEIIPQSVCSRYGLAIGATVAPVVRILVWICYPVAYPISKLLDFLL 129

Query: 121 GHSD-ALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTF 179
           GH   ALFRRA+LK LV  HG EAGKGGELTHDETTII+GAL+L+EKTA +AM+PI  TF
Sbjct: 130 GHGHVALFRRAELKTLVDFHGNEAGKGGELTHDETTIIAGALELSEKTASDAMSPISDTF 189

Query: 180 SLDVNSKLD 188
           ++D+N+KLD
Sbjct: 190 AIDINAKLD 198


>GSVIVT01007281001 assembled CDS
          Length = 425

 Score =  239 bits (611), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 116/189 (61%), Positives = 150/189 (79%), Gaps = 1/189 (0%)

Query: 1   SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
           S+ LV+LE+L +SG+ +++K A  I+PVV++QH LL TLL+CNA AME LPI LD +   
Sbjct: 38  SMSLVDLEVLAKSGTPSDRKHALKILPVVRRQHLLLCTLLICNAAAMETLPIFLDSLVST 97

Query: 61  FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
           + A+L+SVT +L FGE+IPQA+CS++GL +GA     VRIL+ IC+P+AYPI K+LD  L
Sbjct: 98  WGAILISVTLILLFGEIIPQAVCSQHGLAIGAAVAPFVRILVWICFPVAYPISKLLDRLL 157

Query: 121 GHS-DALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTF 179
           G   +ALFRRA+LK LV  HG EAGKGGELT DETTII+GAL+LTEKTA +AMTPI  TF
Sbjct: 158 GKGHEALFRRAELKTLVDFHGNEAGKGGELTRDETTIITGALELTEKTARDAMTPISETF 217

Query: 180 SLDVNSKLD 188
           S+D+N+KLD
Sbjct: 218 SVDINAKLD 226


>GSVIVT01009710001 assembled CDS
          Length = 524

 Score =  229 bits (585), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 112/188 (59%), Positives = 144/188 (76%), Gaps = 1/188 (0%)

Query: 1   SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
           SLGLV+LE+L +SG   ++  AA I PVV+ QH LL TLL+ N+ AME+LPI LDK+  P
Sbjct: 38  SLGLVDLEVLIKSGRPQDRIHAAKIFPVVKNQHLLLCTLLIGNSLAMESLPIFLDKLVPP 97

Query: 61  FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
           + A+L+SVT +L FGE++PQA+C+RYG+ VGA     VR+L+++ YPIAYPI K+LD  L
Sbjct: 98  WAAILISVTLILMFGEILPQALCTRYGMTVGATMAPFVRVLLLLFYPIAYPISKVLDWML 157

Query: 121 GHSD-ALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTF 179
           G    AL RRA+LK  V  HG EAGKGG+LTHDETTII+GAL+LTEKTA++AMTPI   F
Sbjct: 158 GKGHAALLRRAELKTFVDFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAF 217

Query: 180 SLDVNSKL 187
           SLD++  L
Sbjct: 218 SLDLDGTL 225


>GSVIVT01028842001 assembled CDS
          Length = 540

 Score =  218 bits (556), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 112/190 (58%), Positives = 150/190 (78%), Gaps = 3/190 (1%)

Query: 1   SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
           SL LV+LE+L ++G   +++ A  I+P+V+ QH LL TLL+ N+ AMEALPI LD +   
Sbjct: 39  SLSLVDLEVLAKAGRPQDRRNAEKILPIVKNQHLLLCTLLIGNSLAMEALPIFLDALVPA 98

Query: 61  FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
           + A+L+SVT +LAFGE+IPQA+CS+YGL VGA    +VR+L+++ +PI+YPI K+LD  L
Sbjct: 99  WGAILISVTLILAFGEIIPQAVCSQYGLSVGAKLSVVVRLLVLVLFPISYPISKLLDWLL 158

Query: 121 --GHSDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIEST 178
             GHS AL RRA+LK LV +HG EAG+GGELTHDETTIISG LD+T+KTA++AMTPI   
Sbjct: 159 GKGHS-ALLRRAELKTLVDMHGNEAGRGGELTHDETTIISGVLDMTQKTAKDAMTPISEI 217

Query: 179 FSLDVNSKLD 188
           FSLD+N++LD
Sbjct: 218 FSLDINTRLD 227