Jatropha Genome Database
- JcCA0066751.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0066751.10 + phase: 0 /pseudo/partial
(189 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01012197001 assembled CDS 86 1e-17
GSVIVT01014844001 assembled CDS 84 3e-17
GSVIVT01016182001 assembled CDS 84 4e-17
GSVIVT01018162001 assembled CDS 78 3e-15
GSVIVT01033678001 assembled CDS 75 2e-14
GSVIVT01031461001 assembled CDS 75 2e-14
GSVIVT01037851001 assembled CDS 71 2e-13
GSVIVT01018161001 assembled CDS 71 3e-13
GSVIVT01011505001 assembled CDS 67 7e-12
GSVIVT01037363001 assembled CDS 65 1e-11
GSVIVT01037364001 assembled CDS 64 5e-11
>GSVIVT01012197001 assembled CDS
Length = 554
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 14/141 (9%)
Query: 17 KRTKRSRTENSPTEEEYLALCLLMLAKGT-------------TAATNYDHSSPSPSLELC 63
K+ S+ EN P E++ LA+CL+ML++ + A N +S +
Sbjct: 320 KKESGSQQENKPQEQQELAICLMMLSRDSGHWGGLNSLYDLSKRAKNDSYSEENVRKRSK 379
Query: 64 YKCKLCNKSFPNHQALAGHKASHRKPVGVVDDDQSETASAFTTSKTISKVISVNVKTHEC 123
Y+C CNK+F +HQAL GH+A+H++ + ++ A + K K+ S H C
Sbjct: 380 YQCLTCNKTFHSHQALGGHRANHKRKLARFGSGKTPIAQDL-SGKAEKKIGSRKSNGHMC 438
Query: 124 SICHRTFPSGQALGGHKRRHY 144
IC + F SGQALGGHK+ H+
Sbjct: 439 PICFKVFRSGQALGGHKKSHF 459
>GSVIVT01014844001 assembled CDS
Length = 461
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Query: 64 YKCKLCNKSFPNHQALAGHKASHRKPVGVVDDDQSETASAFTTSKTISKVISVNVKTHEC 123
Y+C CNKSFP HQAL GH++SH K D S + A + + + S+ TH+C
Sbjct: 320 YRCSTCNKSFPTHQALGGHRSSHNKFKNSQTMDDSASHEALGCNDAAAALASMLSTTHQC 379
Query: 124 SICHRTFPSGQALGGHKRRHYXXXXXXXXXXXXXRFDSEKKGMDLSLISQHDFDLN-LPA 182
C++TFP+GQALGGH R H+ ++ + G L L FDLN LPA
Sbjct: 380 KCCNKTFPTGQALGGHMRCHWNGPSEAPSSQVTSPGEASQTGPKLLL----GFDLNELPA 435
Query: 183 LPE 185
+ E
Sbjct: 436 MDE 438
>GSVIVT01016182001 assembled CDS
Length = 353
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 72/129 (55%), Gaps = 27/129 (20%)
Query: 25 ENSPTEEEYLALCLLMLAKGTT----------AATNYDHSSPSPSLELCYKCKLCNKSFP 74
++S E+E LA CL++LA+G + + ++ + + Y+CK CN++FP
Sbjct: 126 QDSSEEDEDLANCLILLAQGQSREESKVEDGGGSVAAAATATAKAGFYAYECKTCNRTFP 185
Query: 75 NHQALAGHKASHRKPVGVVDDDQSETASAFTTSKTISKVISVNVKTHECSICHRTFPSGQ 134
+ QAL GH+ASH+KP A AF +S + S++ HECSIC F SGQ
Sbjct: 186 SFQALGGHRASHKKP----------KARAFNSSSSKSRI-------HECSICGAEFTSGQ 228
Query: 135 ALGGHKRRH 143
ALGGH RRH
Sbjct: 229 ALGGHMRRH 237
>GSVIVT01018162001 assembled CDS
Length = 399
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 64 YKCKLCNKSFPNHQALAGHKASHRKPVGVVDDDQSETASAFTTSKTIS-KVISVNVKTHE 122
++CK C K F +HQAL GH+ASH+K G + I+ S K HE
Sbjct: 148 FECKACKKVFNSHQALGGHRASHKKVKGCFAARLDHMDESLADEDVITHDEFSRKSKVHE 207
Query: 123 CSICHRTFPSGQALGGHKRRHY 144
CSICHR F SGQALGGHKR H+
Sbjct: 208 CSICHRVFSSGQALGGHKRCHW 229
>GSVIVT01033678001 assembled CDS
Length = 232
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 67/126 (53%), Gaps = 16/126 (12%)
Query: 34 LALCLLMLAKGTT---AATNYDHSSPSPSLELCYKCKLCNKSFPNHQALAGHKASHRKPV 90
+A CL++LA+G + A +S + Y+CK C + FP+ QAL GH+ASH++P
Sbjct: 60 MANCLILLAQGQSRKVAVPAAAATSSKATGFYVYQCKTCYRCFPSFQALGGHRASHKRPK 119
Query: 91 GVVDD-----------DQSETASAFTTSKTISKVISVN--VKTHECSICHRTFPSGQALG 137
V ++ DQ S + + ++ + N K HECSIC F SGQALG
Sbjct: 120 AVTEEKRTWALMEDEYDQFNHNSTALSLQIPNRGLYSNNKSKVHECSICGAEFSSGQALG 179
Query: 138 GHKRRH 143
GH RRH
Sbjct: 180 GHMRRH 185
>GSVIVT01031461001 assembled CDS
Length = 228
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 77/179 (43%), Gaps = 45/179 (25%)
Query: 34 LALCLLMLAKG----------------TTAATNYDHSSPSPSLELCYKCKLCNKSFPNHQ 77
+A CL++LA+G + + T ++ + Y+CK CN++FP+ Q
Sbjct: 37 MANCLILLAQGLGPRQIEEGGAVEKLSSPSFTEMATTTAGKAGFYVYECKTCNRTFPSFQ 96
Query: 78 ALAGHKASHRKPVGVVDDDQSETASAFTTSKTISKVISVNVKTHECSICHRTFPSGQALG 137
AL GH+ASH+KP + + +K + S K HECSIC F SGQALG
Sbjct: 97 ALGGHRASHKKPKAI----SPPLSLQIGNNKALHS--SNKSKVHECSICGSEFSSGQALG 150
Query: 138 GHKRRHYXXXXXXXXXXXXXRFDSEKKGMDLSLISQHD-----------FDLNLPALPE 185
GH RRH MD + HD DLNLPA PE
Sbjct: 151 GHMRRHRSNTSTRITMS-----------MDAGKMDSHDHHKKEPRNVLPLDLNLPA-PE 197
>GSVIVT01037851001 assembled CDS
Length = 161
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 15 KRKRTKRSRTENSPTEEEYLALCLLMLAKGTTAATNYDHSSPSPSLELCYKCKLCNKSFP 74
KRKR++R R EN TEEEYLALCL+MLA+G P + ++C +C+++FP
Sbjct: 31 KRKRSRRPRFENPSTEEEYLALCLIMLARGGATTREEPQGQPPET----HECSICHRTFP 86
Query: 75 NHQALAGHKASH 86
QAL GHK H
Sbjct: 87 TGQALGGHKRCH 98
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/26 (88%), Positives = 25/26 (96%)
Query: 119 KTHECSICHRTFPSGQALGGHKRRHY 144
+THECSICHRTFP+GQALGGHKR HY
Sbjct: 74 ETHECSICHRTFPTGQALGGHKRCHY 99
>GSVIVT01018161001 assembled CDS
Length = 257
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 64 YKCKLCNKSFPNHQALAGHKASHRKPVGVVDDDQSETASAFTTSKTISKVISVNVKTHEC 123
YKC+ CNK F ++QAL GH+ASH+K + E ++ ++ + K HEC
Sbjct: 122 YKCETCNKVFRSYQALGGHRASHKKIKACAPIKEVEFEPENASNPCLA-----DAKIHEC 176
Query: 124 SICHRTFPSGQALGGHKRRH 143
+C R F SGQALGGHKR H
Sbjct: 177 PVCFRKFTSGQALGGHKRSH 196
>GSVIVT01011505001 assembled CDS
Length = 692
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 29/153 (18%)
Query: 55 SPSPSLELCYKCKLCNKSFPNHQALAGHK----ASHRKPVG-------VVDDDQSETA-- 101
SP+ + YKC +C+K F +H+ L GH+ AS K G ++ D ++ +
Sbjct: 259 SPAAQNKRIYKCSICSKIFQSHRVLGGHRMRCLASKSKSCGKSIQTNKILPDGKANSKLE 318
Query: 102 ----SAFTTSKTISKVISVNV-----KTHECSICHRTFPSGQALGGHKRRHYXXXXXXXX 152
+ + + ++V +N K +EC IC + F SGQALGGHKR HY
Sbjct: 319 KREYNENSIGQEAARVSGMNCELKRSKDYECEICFKVFASGQALGGHKRAHYAGSSETGE 378
Query: 153 XXXXXRFDSEKKGMDLSLISQHDFDLNLPALPE 185
+++ D+S I FDLNLP PE
Sbjct: 379 EGTTL---VQQEHSDVSDI----FDLNLPIAPE 404
>GSVIVT01037363001 assembled CDS
Length = 296
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 64 YKCKLCNKSFPNHQALAGHKASHRKPVGVVDDDQSETASAFTTSKTISKVISVNVKTHEC 123
+KC C+K FP QAL GH++SH + D E S +SK + V +C
Sbjct: 185 HKCSTCHKVFPTFQALGGHRSSHSYKNNLQAMDAGEEESKEGSSKVV-------VDGFKC 237
Query: 124 SICHRTFPSGQALGGHKRRHY 144
+IC + F SGQALGGHKR H+
Sbjct: 238 NICSKNFRSGQALGGHKRAHF 258
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 19/97 (19%)
Query: 66 CKLCNKSFPNHQALAGHKASH--RKPVGV-------VDDDQSETASAFTTSKTIS----- 111
C +C+KSF + +A+ GH H R+ G+ D +E+ S TT ++ +
Sbjct: 111 CPVCSKSFRSKKAVYGHMRCHPDREWRGINPPPSAKSDSCSTESGSKNTTDRSKNGNKLD 170
Query: 112 -KVIS----VNVKTHECSICHRTFPSGQALGGHKRRH 143
K++S V + H+CS CH+ FP+ QALGGH+ H
Sbjct: 171 QKIVSESPLVAPREHKCSTCHKVFPTFQALGGHRSSH 207
>GSVIVT01037364001 assembled CDS
Length = 328
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 13/89 (14%)
Query: 64 YKCKLCNKSFPNHQALAGHKASHR-KPVGVVDDDQSETASAFTTSKTISKV--------I 114
+KC+ CNKSFP QAL GH+ SHR KP + Q A SK +K+ +
Sbjct: 192 HKCRTCNKSFPTGQALGGHQTSHRQKPAQLATPRQ----EALILSKNRNKLDQEIESESL 247
Query: 115 SVNVKTHECSICHRTFPSGQALGGHKRRH 143
V + +CS CH+ FP+ QALGGH+ H
Sbjct: 248 LVAPRESKCSTCHKVFPTLQALGGHRSSH 276
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 28/104 (26%)
Query: 65 KCKLCNKSFPNHQALAGHKASH--RKPVGV-----------------VDD------DQSE 99
KC +C+K F + +A+ GH H R+ G+ +D +E
Sbjct: 114 KCPVCSKGFHSKKAMYGHMRCHPEREWRGINPPPFAKTVSCSSVSQGIDGLSHASMTSTE 173
Query: 100 TASAFTTSKTISKVISVNVKTHECSICHRTFPSGQALGGHKRRH 143
A TSK +V+ K H+C C+++FP+GQALGGH+ H
Sbjct: 174 EGLAVGTSKHAKQVVQ---KAHKCRTCNKSFPTGQALGGHQTSH 214