Jatropha Genome Database

JcCA0066621.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0066621.20 - phase: 2 /partial
         (319 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01015111001 assembled CDS                                       544   e-155
GSVIVT01022784001 assembled CDS                                       369   e-103
GSVIVT01007849001 assembled CDS                                       192   2e-49
GSVIVT01032320001 assembled CDS                                       107   5e-24
GSVIVT01023663001 assembled CDS                                       107   8e-24
GSVIVT01037062001 assembled CDS                                        89   3e-18
GSVIVT01002032001 assembled CDS                                        74   7e-14
GSVIVT01037063001 assembled CDS                                        65   3e-11
GSVIVT01032319001 assembled CDS                                        57   1e-08
GSVIVT01023662001 assembled CDS                                        57   2e-08
GSVIVT01020590001 assembled CDS                                        54   1e-07
GSVIVT01014617001 assembled CDS                                        53   2e-07

>GSVIVT01015111001 assembled CDS
          Length = 622

 Score =  544 bits (1402), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 253/317 (79%), Positives = 290/317 (91%)

Query: 1   NAENNSIFDVIGIVTSVNPSVPILRKNGMETQRRILNLKDGSGRSVELTLGGDFCNKEGQ 60
           N ENNSI DVIGIV SVNPSVPILRKNGMETQRRI+NLKDGSGRS+ELT+ G+FCN+EG 
Sbjct: 306 NVENNSILDVIGIVISVNPSVPILRKNGMETQRRIVNLKDGSGRSIELTMWGEFCNREGH 365

Query: 61  KLQEIVDSGVFPVLAVKAGKVSDFSGKSLGTISSTQLFINPDIPEAYSVKDWFDRGGQNA 120
           +LQE++DSG FPVLAVK+GKV+DFSGKS+GTIS+TQLFINPD  EA ++++WFDRGG+NA
Sbjct: 366 QLQEMIDSGSFPVLAVKSGKVNDFSGKSVGTISATQLFINPDFTEACNLREWFDRGGKNA 425

Query: 121 TSVSISRDIMPGAPKNEIRKTVSQIKDEGLGRSDKPDWVTVSARITFVKTDTFCYTACPL 180
            S SISRDIMP   +NEIRKTVSQIKDEGLGRSDKPDWVTV A I+F+KTDTFCY ACPL
Sbjct: 426 ASQSISRDIMPAGSRNEIRKTVSQIKDEGLGRSDKPDWVTVKATISFIKTDTFCYAACPL 485

Query: 181 MIGDRQCNKKVTRSGNSRWQCDRCNQEFDECDYRYLLQAQIQDHTGITWVTAFQESGEQI 240
           MIGDRQCNKKVTRSGN+RWQCDRCNQEF++CDYRYLLQAQ+QDHTG+TWVTAFQE+GE+I
Sbjct: 486 MIGDRQCNKKVTRSGNTRWQCDRCNQEFEDCDYRYLLQAQVQDHTGLTWVTAFQEAGEEI 545

Query: 241 LGYPAKEMYLLKNELQDETRFADILRSILFEQYLFRLKIKEEMYGDEQRVKITVVKADKV 300
           LG  AKE+YLLK E +D+ RF +I+RS L  Q+LFRLKIKEEMYG+EQRVKITVVKADKV
Sbjct: 546 LGCSAKELYLLKYEEEDDFRFGEIIRSRLLNQFLFRLKIKEEMYGEEQRVKITVVKADKV 605

Query: 301 DYSSESRYLLDLISKHP 317
           +Y+SESR+LLDLISK P
Sbjct: 606 NYTSESRHLLDLISKCP 622


>GSVIVT01022784001 assembled CDS
          Length = 754

 Score =  369 bits (948), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 176/314 (56%), Positives = 229/314 (72%), Gaps = 42/314 (13%)

Query: 3   ENNSIFDVIGIVTSVNPSVPILRKNGMETQRRILNLKDGSGRSVELTLGGDFCNKEGQKL 62
           ENNS+ DVIG+V+ ++PS  I+RKNG ETQ+R L+LKD SGRSVELTL G+FCN EGQ+L
Sbjct: 262 ENNSVVDVIGVVSFISPSASIMRKNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRL 321

Query: 63  QEIVDSGVFPVLAVKAGKVSDFSGKSLGTISSTQLFINPDIPEAYSVKDWFDRGGQNATS 122
           Q +                       LGTIS++QLFI PD PEA  +K+WFD+ G+N  S
Sbjct: 322 QNM-----------------------LGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPS 358

Query: 123 VSISRDIMPGAPKNEIRKTVSQIKDEGLGRSDKPDWVTVSARITFVKTDTFCYTACPLMI 182
           VSISR++     + ++RKT+SQIKDE LG S+KPDW+TV A ++F+K D FCYTACP+MI
Sbjct: 359 VSISREVTSMG-RTDVRKTISQIKDERLGTSEKPDWITVCATVSFIKVDNFCYTACPIMI 417

Query: 183 GDRQCNKKVTRSGNSRWQCDRCNQEFDECDYRYLLQAQIQDHTGITWVTAFQESGEQILG 242
           GDRQCNKKVT +G+ +W+C+RC+Q  D+CDYRY+LQ QIQDHTG+TWVTAFQE       
Sbjct: 418 GDRQCNKKVTNNGDGKWRCERCDQSVDDCDYRYILQFQIQDHTGLTWVTAFQEC------ 471

Query: 243 YPAKEMYLLKNELQDETRFADILRSILFEQYLFRLKIKEEMYGDEQRVKITVVKADKVDY 302
                        QD+ +F +ILR +LF +Y F+LK+KEE++ DEQRVK TVVKA+KV++
Sbjct: 472 ------------EQDDEKFGEILRGVLFTKYSFKLKVKEEIFSDEQRVKSTVVKAEKVNF 519

Query: 303 SSESRYLLDLISKH 316
           SSESR+LLD++ KH
Sbjct: 520 SSESRFLLDMVEKH 533


>GSVIVT01007849001 assembled CDS
          Length = 602

 Score =  192 bits (488), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 109/316 (34%), Positives = 181/316 (57%), Gaps = 15/316 (4%)

Query: 7   IFDVIGIVTSVNPSVPILRKNGME-TQRRILNLKDGSGRSVELTLGGDFCNKEGQKLQEI 65
           + DVIG+V SV+P++ I RK+  +   +R + + D + ++V ++L  D     GQ+L + 
Sbjct: 290 LVDVIGVVQSVSPTMSIRRKSNNDIVPKRDITIADKTKKTVVVSLWNDHATNVGQELLDN 349

Query: 66  VDSGVFPVLAVKAGKVSDFSGKSLGTISSTQLFINPDIPEAYSVKDWFDRGGQNATSVSI 125
            D   FP++A+K+ KV DF G SL T+S + + +NPD PE+  ++ W+D  G+ A+  SI
Sbjct: 350 ADK--FPIVAIKSLKVGDFQGVSLSTLSKSIVLVNPDTPESKKLRSWYDSEGKGASMASI 407

Query: 126 SRDIMP---GAPKNEI--RKTVSQIKDEGLGRSDKPDWVTVSARITFVKTD-TFCYTACP 179
             DI P   G  K+    R ++S +        DKP + ++ A I+F+K D T  Y AC 
Sbjct: 408 GSDISPSSKGGVKSMYYDRVSLSHVTSNPSLGEDKPSFFSIRAYISFIKPDQTMWYRAC- 466

Query: 180 LMIGDRQCNKKVTRSGNSRWQCDRCNQEFDECDYRYLLQAQIQDHTGITWVTAFQESGEQ 239
                + CNKKVT +  S + C+ C +  DEC  RY++  ++ D +G  W++ F E  E+
Sbjct: 467 -----KTCNKKVTDAIGSGYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNEQAER 521

Query: 240 ILGYPAKEMYLLKNELQDETRFADILRSILFEQYLFRLKIKEEMYGDEQRVKITVVKADK 299
           + G  A E+  LK++  +E  F   L+  ++  +LFR+ + +  Y +E+R +IT      
Sbjct: 522 MFGCSADELDKLKSQEGEENLFQQKLKEAIWVPHLFRISVAQHEYMNEKRQRITARAVVP 581

Query: 300 VDYSSESRYLLDLISK 315
           VD+++ESR LL+ ISK
Sbjct: 582 VDFAAESRLLLEEISK 597


>GSVIVT01032320001 assembled CDS
          Length = 181

 Score =  107 bits (268), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 99/178 (55%), Gaps = 7/178 (3%)

Query: 139 RKTVSQIKDEGLGRSDKPDWVTVSARITFVKTD-TFCYTACPLMIGDRQCNKKVTRSGNS 197
           R ++S +        DKP + ++ A I+F+K D T  Y AC      + CNKKVT +  S
Sbjct: 5   RVSLSHVTSNPSLGEDKPSFFSIRAYISFIKPDQTMWYRAC------KTCNKKVTDAIGS 58

Query: 198 RWQCDRCNQEFDECDYRYLLQAQIQDHTGITWVTAFQESGEQILGYPAKEMYLLKNELQD 257
            + C+ C +  DEC  RY++  ++ D +G  W++ F +  E+I G  A E+  LK++  +
Sbjct: 59  EYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNDQAERIFGCSADELDKLKSQEGE 118

Query: 258 ETRFADILRSILFEQYLFRLKIKEEMYGDEQRVKITVVKADKVDYSSESRYLLDLISK 315
           E  F   L+  ++   LFR+ + +  Y +E+R +IT      VD+++ESR LL+ ISK
Sbjct: 119 ENLFQQKLKEAIWVPQLFRISVAQHEYMNEKRQRITARAVVPVDFAAESRLLLEEISK 176


>GSVIVT01023663001 assembled CDS
          Length = 181

 Score =  107 bits (267), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 99/178 (55%), Gaps = 7/178 (3%)

Query: 139 RKTVSQIKDEGLGRSDKPDWVTVSARITFVKTD-TFCYTACPLMIGDRQCNKKVTRSGNS 197
           R ++S +        DKP + ++ A I+F+K D T  Y AC      + CNKKVT +  S
Sbjct: 5   RVSLSHVTSNPSLGEDKPSFFSIRAYISFIKPDQTMWYRAC------KTCNKKVTDAIGS 58

Query: 198 RWQCDRCNQEFDECDYRYLLQAQIQDHTGITWVTAFQESGEQILGYPAKEMYLLKNELQD 257
            + C+ C +  DEC  RY++  ++ D +G  W++ F +  E+I G  A E+  LK++  +
Sbjct: 59  GYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNDQAERIFGCSADELDKLKSQEGE 118

Query: 258 ETRFADILRSILFEQYLFRLKIKEEMYGDEQRVKITVVKADKVDYSSESRYLLDLISK 315
           E  F   L+  ++   LFR+ + +  Y +E+R +IT      VD+++ESR LL+ ISK
Sbjct: 119 ENLFQQKLKEAIWVPQLFRISVAQHEYMNEKRQRITARAVVPVDFAAESRLLLEEISK 176


>GSVIVT01037062001 assembled CDS
          Length = 168

 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 87/158 (55%), Gaps = 16/158 (10%)

Query: 63  QEIVDSG-VFPVLAVKAGKVSDFSGKSLGTISSTQLFINPDIPEAYSVKDWF-DRGGQNA 120
           +E++D+   FP++A+K+ KV DF G SL T+S +   +NPD PE+  ++ W+ D  G+ A
Sbjct: 17  RELLDNADKFPIIAIKSLKVGDFQGVSLSTLSKSIALVNPDTPESKKLRSWYHDYHGKVA 76

Query: 121 TSVSISRDIMPGAPKNEIRK------TVSQIKDEGLGRSDKPDWVTVSARITFVKTD-TF 173
           +   I  DI P + K  +R       ++S +        DKP + ++ A I+F+K + T 
Sbjct: 77  SMACIGSDISPSS-KGGVRSMYYDRVSLSHVTSNPSLGEDKPSFFSIRAYISFIKPEQTM 135

Query: 174 CYTACPLMIGDRQCNKKVTRSGNSRWQCDRCNQEFDEC 211
            Y AC      + CNKKVT +  S + C+ C +  DEC
Sbjct: 136 WYQAC------KTCNKKVTDAIESGYWCEGCEKNDDEC 167


>GSVIVT01002032001 assembled CDS
          Length = 131

 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 14/137 (10%)

Query: 123 VSISRDIMPGAPKNEIRK------TVSQIKDEGLGRSDKPDWVTVSARITFVKTD-TFCY 175
            SI  DI P + K  +R       ++S +        DKP + ++ A I+F+K D T  Y
Sbjct: 2   ASIGSDISPSS-KGGVRSMYYDRVSLSHVTSNPYLGEDKPSFFSIRAYISFIKPDQTMWY 60

Query: 176 TACPLMIGDRQCNKKVTRSGNSRWQCDRCNQEFDECDYRYLLQAQIQDHTGITWVTAFQE 235
            AC      + CNKKVT +  S + C+ C +  DEC  RY++  ++ D +G  W++ F E
Sbjct: 61  RAC------KTCNKKVTGAIGSGYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSMFNE 114

Query: 236 SGEQILGYPAKEMYLLK 252
             E+I G  A E   LK
Sbjct: 115 QAERIFGCSADEPDKLK 131


>GSVIVT01037063001 assembled CDS
          Length = 115

 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 62/109 (56%)

Query: 207 EFDECDYRYLLQAQIQDHTGITWVTAFQESGEQILGYPAKEMYLLKNELQDETRFADILR 266
           EF+    +Y++  ++ D +G   +  F E  E+I G  A E+  LK++  +E RF   L+
Sbjct: 2   EFESIRIQYIMVVKVSDDSGEACLALFNEQAERIFGCSADELDKLKSQEGEENRFQQKLK 61

Query: 267 SILFEQYLFRLKIKEEMYGDEQRVKITVVKADKVDYSSESRYLLDLISK 315
             ++  +LFR+ + +  Y +E+R  IT      VD+++ESR LL+ ISK
Sbjct: 62  EAIWVPHLFRISVAQHEYMNEKRQWITARAVVAVDFAAESRLLLEEISK 110


>GSVIVT01032319001 assembled CDS
          Length = 115

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)

Query: 10  VIGIVTSVNPSVPILRKNGME-TQRRILNLKDGSGRSVELTLGGDFCNKEGQKLQEIVDS 68
           V G+V SV+P++ I RK+  +   +R +   D + ++V ++L  D     GQ+L +  D 
Sbjct: 13  VSGVVQSVSPTMRIQRKSHNDIVPKRDITFADKTKKTVVVSLWNDHATNVGQELLDNADK 72

Query: 69  GVFPVLAVKAGKVSDFSGKSLGTISSTQLFINPDIPE 105
             FP++A+K+ KV DF   SL T+S + + +NPD  E
Sbjct: 73  --FPIVAIKSLKVGDFQVVSLSTLSESIVLVNPDTRE 107


>GSVIVT01023662001 assembled CDS
          Length = 107

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)

Query: 10  VIGIVTSVNPSVPILRKNGME-TQRRILNLKDGSGRSVELTLGGDFCNKEGQKLQEIVDS 68
           V G+V SV+P++ I RK+  +   +R +   D + ++V ++L  D     GQ+L +  D 
Sbjct: 13  VSGVVQSVSPTMRIRRKSHNDIVPKRDITFADKTKKTVVVSLWNDHATNVGQELLDNADK 72

Query: 69  GVFPVLAVKAGKVSDFSGKSLGTISSTQLFINPDIPE 105
             FP++A+K+ KV DF   SL T+S + + +NPD  E
Sbjct: 73  --FPIVAIKSLKVGDFQVVSLSTLSESIVLVNPDTRE 107


>GSVIVT01020590001 assembled CDS
          Length = 104

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%)

Query: 220 QIQDHTGITWVTAFQESGEQILGYPAKEMYLLKNELQDETRFADILRSILFEQYLFRLKI 279
           ++ D +G   ++ F E  E+I G  A E+  LK +  +E RF   ++  ++   LF++ +
Sbjct: 4   KVSDDSGEAILSLFNEQAERIFGCSADELDKLKPQEGEEKRFQHKMKDAIWVPNLFQIIV 63

Query: 280 KEEMYGDEQRVKITVVKADKVDYSSESRYLLDLISK 315
            +  Y +E+R  IT     + D+ +ESR+LLD ISK
Sbjct: 64  AQHEYKNEKRQWITARAVVQDDFEAESRFLLDEISK 99


>GSVIVT01014617001 assembled CDS
          Length = 75

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 37/63 (58%)

Query: 199 WQCDRCNQEFDECDYRYLLQAQIQDHTGITWVTAFQESGEQILGYPAKEMYLLKNELQDE 258
           + C+ C +  DEC  RY++  ++ D +G  W++ F E  E+I GY A E+  LK++  +E
Sbjct: 9   YWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNEQAERIFGYSADELDKLKSQEGEE 68

Query: 259 TRF 261
             F
Sbjct: 69  NLF 71