Jatropha Genome Database

JcCA0065831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0065831.10 - phase: 1 /partial
         (152 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01007521001 assembled CDS                                       282   5e-77
GSVIVT01010328001 assembled CDS                                       272   5e-74
GSVIVT01001842001 assembled CDS                                       262   5e-71
GSVIVT01036751001 assembled CDS                                       246   2e-66
GSVIVT01013403001 assembled CDS                                       114   2e-26
GSVIVT01037165001 assembled CDS                                        93   5e-20
GSVIVT01037170001 assembled CDS                                        91   2e-19
GSVIVT01037176001 assembled CDS                                        81   2e-16
GSVIVT01001128001 assembled CDS                                        78   2e-15

>GSVIVT01007521001 assembled CDS
          Length = 343

 Score =  282 bits (721), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 135/150 (90%), Positives = 147/150 (98%)

Query: 1   TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV 60
           TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLP+LNGKLTGMAFRVPTVDVSVV
Sbjct: 192 TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTGMAFRVPTVDVSVV 251

Query: 61  DLTVRLEKAATYEQIKAAIKEESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIAL 120
           DLTVRLEKAATYEQ+KAAIKEESEGK+KGILGY E+D+VS+DFIGDNRSSIFDAKAGIAL
Sbjct: 252 DLTVRLEKAATYEQVKAAIKEESEGKMKGILGYTEDDVVSTDFIGDNRSSIFDAKAGIAL 311

Query: 121 NDKFVKLVSWYDNEVGYSTRVVDLICHMAS 150
           N+KF+K+V+WYDNE GYS+RV+DLI HMAS
Sbjct: 312 NEKFLKIVAWYDNEWGYSSRVIDLIVHMAS 341


>GSVIVT01010328001 assembled CDS
          Length = 380

 Score =  272 bits (695), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 132/150 (88%), Positives = 144/150 (96%)

Query: 1   TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV 60
           TQKTVDGPS KDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGM+FRVPTVDVSVV
Sbjct: 230 TQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVV 289

Query: 61  DLTVRLEKAATYEQIKAAIKEESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIAL 120
           DLTVRLEK+ATY+++KAAIKEESEGKLKGILGY E+D+VS+DFIGD+RSSIFDAKAGIAL
Sbjct: 290 DLTVRLEKSATYDEVKAAIKEESEGKLKGILGYTEDDVVSTDFIGDSRSSIFDAKAGIAL 349

Query: 121 NDKFVKLVSWYDNEVGYSTRVVDLICHMAS 150
           N  F+KLVSWYDNE GYS+RV+DLI HMAS
Sbjct: 350 NANFLKLVSWYDNEWGYSSRVIDLIRHMAS 379


>GSVIVT01001842001 assembled CDS
          Length = 337

 Score =  262 bits (669), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 128/150 (85%), Positives = 139/150 (92%)

Query: 1   TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV 60
           TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPT DVSVV
Sbjct: 186 TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTADVSVV 245

Query: 61  DLTVRLEKAATYEQIKAAIKEESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIAL 120
           DLTVR EK A+Y+ IKAAIK ESEG LKGILGY E+++VSSDF+GD+RSSIFDAKAGIAL
Sbjct: 246 DLTVRTEKKASYDDIKAAIKAESEGNLKGILGYTEDEVVSSDFLGDSRSSIFDAKAGIAL 305

Query: 121 NDKFVKLVSWYDNEVGYSTRVVDLICHMAS 150
           N+ F+KLVSWYDNE GYS+RVVDLI H+ S
Sbjct: 306 NENFIKLVSWYDNEWGYSSRVVDLIRHIDS 335


>GSVIVT01036751001 assembled CDS
          Length = 429

 Score =  246 bits (629), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 119/149 (79%), Positives = 133/149 (89%)

Query: 1   TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV 60
           TQKTVDGPSMKDWRGGR AS NIIPSSTGAAKAVGKVLP LNGKLTGMAFRVPT +VSVV
Sbjct: 275 TQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVV 334

Query: 61  DLTVRLEKAATYEQIKAAIKEESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIAL 120
           DLT RL+K+ATYE +KAA+K  SEG LKGILGY +ED+VS+DF+GD+RSSIFDAKAGI L
Sbjct: 335 DLTCRLKKSATYEDVKAAVKYASEGPLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGL 394

Query: 121 NDKFVKLVSWYDNEVGYSTRVVDLICHMA 149
           +  F+KLV+WYDNE GYS RV+DLI HMA
Sbjct: 395 SASFMKLVAWYDNEWGYSNRVLDLIEHMA 423


>GSVIVT01013403001 assembled CDS
          Length = 453

 Score =  114 bits (284), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 85/124 (68%), Gaps = 1/124 (0%)

Query: 22  NIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKAA-TYEQIKAAIK 80
           NI+P+STGAAKAV  VLP L GKL G+A RVPT +VSVVDL V +EK   T E + AA +
Sbjct: 292 NIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFR 351

Query: 81  EESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIALNDKFVKLVSWYDNEVGYSTR 140
           + ++G LKGIL   +  LVS DF   + SS  DA   + + D  VK+V+WYDNE GYS R
Sbjct: 352 KAADGPLKGILAVCDVPLVSVDFKCSDVSSTIDASLTMVMGDDMVKVVAWYDNEWGYSQR 411

Query: 141 VVDL 144
           VVDL
Sbjct: 412 VVDL 415


>GSVIVT01037165001 assembled CDS
          Length = 180

 Score = 93.2 bits (230), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/62 (72%), Positives = 51/62 (82%)

Query: 77  AAIKEESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIALNDKFVKLVSWYDNEVG 136
           A+ + E EG LK ILGY ++D+VSSDFIGD RSSIF AKAGIALND F+KLVSWYDNE  
Sbjct: 28  ASYRAEYEGNLKEILGYTKDDVVSSDFIGDRRSSIFYAKAGIALNDNFIKLVSWYDNEWV 87

Query: 137 YS 138
           YS
Sbjct: 88  YS 89


>GSVIVT01037170001 assembled CDS
          Length = 208

 Score = 90.9 bits (224), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 48/57 (84%)

Query: 82  ESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIALNDKFVKLVSWYDNEVGYS 138
           E EG LK ILGY ++D+VSSDFIGD RSSIF AKAGIALND F+KLVSWYDNE  YS
Sbjct: 61  EYEGNLKEILGYTKDDVVSSDFIGDRRSSIFYAKAGIALNDNFIKLVSWYDNEWVYS 117


>GSVIVT01037176001 assembled CDS
          Length = 166

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/53 (71%), Positives = 45/53 (84%)

Query: 79  IKEESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIALNDKFVKLVSWY 131
           ++ E EG LK ILGY ++D+VSSDF+GD RSSIF AKAGIALND F+KLVSWY
Sbjct: 58  LEAEYEGNLKEILGYTKDDVVSSDFVGDCRSSIFYAKAGIALNDNFIKLVSWY 110


>GSVIVT01001128001 assembled CDS
          Length = 331

 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/132 (45%), Positives = 79/132 (59%), Gaps = 2/132 (1%)

Query: 2   QKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVD 61
           Q+  D  S +  R  RAA  NI+P+STGAAKAV  VLP L GKL G+A RVPT +VSVVD
Sbjct: 194 QRLFDA-SHRVLRPVRAAVLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTSNVSVVD 252

Query: 62  LTVRLEKAATY-EQIKAAIKEESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIAL 120
           L V +    T+ E++ AA +  +E +L GI    +E LVS DF   + SS  D+   + +
Sbjct: 253 LVVLVNDGETFAEEVNAAFRNSAEKELNGIPSMCDEPLVSVDFRCSDVSSTVDSSLTMVM 312

Query: 121 NDKFVKLVSWYD 132
            D  VK+V   D
Sbjct: 313 GDDMVKVVDLAD 324