Jatropha Genome Database

JcCA0061381.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0061381.10 - phase: 0 
         (487 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01026388001 assembled CDS                                       542   e-154
GSVIVT01026384001 assembled CDS                                       540   e-154
GSVIVT01028441001 assembled CDS                                       538   e-153
GSVIVT01021569001 assembled CDS                                       387   e-108
GSVIVT01021573001 assembled CDS                                       380   e-106
GSVIVT01026378001 assembled CDS                                       204   8e-53
GSVIVT01000454001 assembled CDS                                       197   7e-51

>GSVIVT01026388001 assembled CDS
          Length = 448

 Score =  542 bits (1397), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 276/486 (56%), Positives = 326/486 (67%), Gaps = 88/486 (18%)

Query: 1   MDSLSTNTFSPLDTKTFKDESNMVVEFIEEYYKNIEKYPVQSQVQPGFLSSKLPKTPPYY 60
           M SLS NTFSPLD ++F +ES MVV+FI +YYKN+EKYPVQSQV PG+L    P T PY 
Sbjct: 1   MGSLSFNTFSPLDPQSFSEESKMVVDFIADYYKNVEKYPVQSQVDPGYLIHHCPDTAPYC 60

Query: 61  PEPLEDILKDVTDTIIPGLTHWQSPNFFAYFQANVSNAGFLGEMLCSGFNVVGFNWISSP 120
           PEPLE ILKDV+D+IIPGLTHWQSPNFF YFQAN S AGFLGEMLC+G NVVGFNWI+SP
Sbjct: 61  PEPLETILKDVSDSIIPGLTHWQSPNFFGYFQANASTAGFLGEMLCTGLNVVGFNWIASP 120

Query: 121 AATELESLVMDWMGXXXXXXXXXXXXGTGGGVLHGSTCEAIVCTLAAARDKALQTIGWDK 180
           AATELES+                               AI+C+LAAARDK L+ IG  K
Sbjct: 121 AATELESI-------------------------------AIICSLAAARDKVLKKIGHHK 149

Query: 181 ITKLIIYASDQTHSTLFKGARLIGIPSSNIRNLPTSFSTGFSLSPQILSDTIDNDIKFGF 240
           ITKL++Y SDQTHSTL K ++L+GIP+SN R+LPTSFS  F+L P  +   ++ DI  G 
Sbjct: 150 ITKLVVYGSDQTHSTLQKASKLVGIPTSNFRSLPTSFSNDFALCPDDVRTAMEEDIAAGL 209

Query: 241 YPLFLCATVGTTACGAVDPIKELAEIAKGYNLWFHIDAAYAGSACICPEFRHYLDGVESA 300
            PLFLCATVGTT+ GAVDP++ L  +AK + +                   H+L+GVE A
Sbjct: 210 VPLFLCATVGTTSSGAVDPLEALGHVAKDFKV-------------------HHLNGVELA 250

Query: 301 DSLSMNPHKWLLTNMDCCCLWIKRPNLLVDSLSSEAEFLKNAVSESKAIIDYKDWQIALS 360
            S++MN HKWLLTNMDCCCLWIK P L VDSLS+  EFL+N  SESK +IDYKDWQIALS
Sbjct: 251 HSITMNTHKWLLTNMDCCCLWIKEPKLFVDSLSTAPEFLRNNASESKKVIDYKDWQIALS 310

Query: 361 RRFKALKLWIVIRRHGLANLMYHIRSDISLAKRFESFVRNDKRFEIVVPRKFALVCFRLK 420
           RRF+A+K+W                                    +VVPR+FALVCFRL+
Sbjct: 311 RRFRAIKVW------------------------------------VVVPRRFALVCFRLR 334

Query: 421 PRNGTNDGRELNTQLLAAVNQSGRAFLTHGLAGG-YFIRCAIGSTLTEERHVDELWKLIQ 479
           PR    +G ELN++LL AVN SG AF+TH + GG Y IRCAIGSTLTE RHVD LWKLIQ
Sbjct: 335 PRE-EGEGTELNSRLLMAVNGSGAAFMTHAVVGGIYIIRCAIGSTLTEIRHVDSLWKLIQ 393

Query: 480 XTAQTV 485
             AQ V
Sbjct: 394 EKAQLV 399


>GSVIVT01026384001 assembled CDS
          Length = 467

 Score =  540 bits (1390), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 276/486 (56%), Positives = 324/486 (66%), Gaps = 88/486 (18%)

Query: 1   MDSLSTNTFSPLDTKTFKDESNMVVEFIEEYYKNIEKYPVQSQVQPGFLSSKLPKTPPYY 60
           M SLS NTFSPLD ++F +ES MVV+FI +YYKN+EKYPVQSQV PG+L    P T PY 
Sbjct: 1   MGSLSFNTFSPLDPQSFSEESKMVVDFIADYYKNVEKYPVQSQVDPGYLMHHCPDTAPYC 60

Query: 61  PEPLEDILKDVTDTIIPGLTHWQSPNFFAYFQANVSNAGFLGEMLCSGFNVVGFNWISSP 120
           PEPLE ILKDV+D IIPGLTHWQSPNFF YFQAN S AGFLGEMLC+G NVVGFNWI+SP
Sbjct: 61  PEPLETILKDVSDGIIPGLTHWQSPNFFGYFQANASTAGFLGEMLCTGLNVVGFNWIASP 120

Query: 121 AATELESLVMDWMGXXXXXXXXXXXXGTGGGVLHGSTCEAIVCTLAAARDKALQTIGWDK 180
           AATELES+                               AI+C+LAAARDK L+ +G  K
Sbjct: 121 AATELESI-------------------------------AIICSLAAARDKVLKKLGHHK 149

Query: 181 ITKLIIYASDQTHSTLFKGARLIGIPSSNIRNLPTSFSTGFSLSPQILSDTIDNDIKFGF 240
           ITKL++Y SDQTHSTL K ++L+GIP+SN R+LPTSFS  F+L P  +   ++ DI  G 
Sbjct: 150 ITKLVVYGSDQTHSTLQKASKLVGIPASNFRSLPTSFSNYFALCPDDVRTAMEEDIGAGL 209

Query: 241 YPLFLCATVGTTACGAVDPIKELAEIAKGYNLWFHIDAAYAGSACICPEFRHYLDGVESA 300
            PLFLCATVGTT+ GAVDP++ L  +AK + +                   H+L+GVE A
Sbjct: 210 VPLFLCATVGTTSSGAVDPLEALGHVAKDFKV-------------------HHLNGVELA 250

Query: 301 DSLSMNPHKWLLTNMDCCCLWIKRPNLLVDSLSSEAEFLKNAVSESKAIIDYKDWQIALS 360
            S+SMNPHKWLLTNMDCCCLWIK P L VDSLS+  EFL+N  SESK +IDYKDWQIALS
Sbjct: 251 HSISMNPHKWLLTNMDCCCLWIKEPKLFVDSLSTAPEFLRNNASESKKVIDYKDWQIALS 310

Query: 361 RRFKALKLWIVIRRHGLANLMYHIRSDISLAKRFESFVRNDKRFEIVVPRKFALVCFRLK 420
           RRF+A+K+W                                     VVPR+FALVCFRL+
Sbjct: 311 RRFRAIKVW------------------------------------AVVPRRFALVCFRLR 334

Query: 421 PRNGTNDGRELNTQLLAAVNQSGRAFLTHGLAGG-YFIRCAIGSTLTEERHVDELWKLIQ 479
           PR    +  ELN++LL AVN SG AF+TH + GG Y IRCAIGSTLTE RHVD LWKLIQ
Sbjct: 335 PRE-EGESTELNSRLLMAVNGSGAAFMTHAVVGGIYIIRCAIGSTLTETRHVDSLWKLIQ 393

Query: 480 XTAQTV 485
             AQ V
Sbjct: 394 EKAQLV 399


>GSVIVT01028441001 assembled CDS
          Length = 508

 Score =  538 bits (1387), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 245/476 (51%), Positives = 332/476 (69%), Gaps = 2/476 (0%)

Query: 12  LDTKTFKDESNMVVEFIEEYYKNIEKYPVQSQVQPGFLSSKLPKTPPYYPEPLEDILKDV 71
           +D +  ++  + +V+FI +YYK+IE +PV SQV+PG+L   LP + P  PE L+ +  D+
Sbjct: 1   MDAEQLRENGHKMVDFIADYYKSIENFPVLSQVEPGYLRELLPDSAPNQPESLQQVFDDL 60

Query: 72  TDTIIPGLTHWQSPNFFAYFQANVSNAGFLGEMLCSGFNVVGFNWISSPAATELESLVMD 131
              I+PG+THWQSPNFFAY+ +N S AGFLGEML +G N+VGF+WI+SPAATELE +V+D
Sbjct: 61  QAKILPGVTHWQSPNFFAYYPSNSSTAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLD 120

Query: 132 WMGXXXXXXXXXXXXGTGGGVLHGSTCEAIVCTLAAARDKALQTIGWDKITKLIIYASDQ 191
           W+             G GGGV+ G+  EA++  L AARD+ L+T+G   + KL++Y SDQ
Sbjct: 121 WLAKLLNLPDDFLSAGNGGGVIQGTASEAVLVVLLAARDRVLRTVGKTALEKLVVYGSDQ 180

Query: 192 THSTLFKGARLIGIPSSNIRNLPTSFSTGFSLSPQILSDTIDNDIKFGFYPLFLCATVGT 251
           THS L K  ++ GI   N + L    STG++LSP +LS+ + +DI  G  P FLCA VGT
Sbjct: 181 THSALQKACQIGGIHPENCKLLKADSSTGYALSPDLLSEAVSHDITNGLIPFFLCANVGT 240

Query: 252 TACGAVDPIKELAEIAKGYNLWFHIDAAYAGSACICPEFRHYLDGVESADSLSMNPHKWL 311
           T+  AVDP+ EL ++ K   +WFH+DAAYAGSAC+CPE+RHY+DGVE ADS +MN HKW 
Sbjct: 241 TSSTAVDPLLELGKVTKSNGIWFHVDAAYAGSACVCPEYRHYIDGVEEADSFNMNAHKWF 300

Query: 312 LTNMDCCCLWIKRPNLLVDSLSSEAEFLKNAVSESKAIIDYKDWQIALSRRFKALKLWIV 371
           LTN DC  LW+K  N LV +LS+   FLKN  S++  ++DYKDWQ+ L RRF++LKLW+V
Sbjct: 301 LTNFDCSVLWVKDRNALVQALSTNPVFLKNKASDANMVVDYKDWQVPLGRRFRSLKLWMV 360

Query: 372 IRRHGLANLMYHIRSDISLAKRFESFVRNDKRFEIVVPRKFALVCFRLKPRNGTND-GRE 430
           +R +G+ NL  +IR+ I LAK+FE  V  D RFEIV PRKFALVCFRL P +   D   +
Sbjct: 361 LRLYGVENLQRYIRNHIKLAKQFEELVAQDPRFEIVAPRKFALVCFRLLPPHRNEDFSNK 420

Query: 431 LNTQLLAAVNQSGRAFLTH-GLAGGYFIRCAIGSTLTEERHVDELWKLIQXTAQTV 485
           LN  LL  VN +G+ +++H  L+G Y +R A+G+ LTEERHV+  WK+IQ  A  +
Sbjct: 421 LNHNLLDTVNSTGKVYISHTALSGKYTLRLAVGAPLTEERHVNAAWKVIQEKASVL 476


>GSVIVT01021569001 assembled CDS
          Length = 566

 Score =  387 bits (994), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 194/470 (41%), Positives = 281/470 (59%), Gaps = 88/470 (18%)

Query: 9   FSPLDTKTFKDESNMVVEFIEEYYKNIEKYPVQSQVQPGFLSSKLPKTPPYYPEPLEDIL 68
            +PLD + F+ + +M+++FI  YY++IEKYPV+SQV+PG+L  ++P+  PY PEP+E IL
Sbjct: 14  MNPLDHEEFRRQGHMIIDFIANYYRDIEKYPVRSQVEPGYLHKRIPENAPYNPEPIETIL 73

Query: 69  KDVTDTIIPGLTHWQSPNFFAYFQANVSNAGFLGEMLCSGFNVVGFNWISSPAATELESL 128
           +DV + I+PGLTHW SP  FAY+ AN S                         A  LES 
Sbjct: 74  QDVQNHIVPGLTHWLSPYHFAYYPANAS------------------------IAASLESF 109

Query: 129 VMDWMGXXXXXXXXXXXXGTGGGVLHGSTCEAIVCTLAAARDKALQTIGWDKITKLIIYA 188
           +                 G GGGV+ G+T +A++CT+ AARD+ L  IG + I KL++Y 
Sbjct: 110 LFS---------------GNGGGVIQGTTGDAVLCTVIAARDQLLNRIGRENIVKLVVYG 154

Query: 189 SDQTHSTLFKGARLIGIPSSNIRNLPTSFSTGFSLSPQILSDTIDNDIKFGFYPLFLCAT 248
           SDQTH +L K A++ GI  +N+R++ T+ S  F+LSP  L   I +D + G  PL+LCAT
Sbjct: 155 SDQTHCSLHKAAKIAGIHPNNVRSVKTTKSKAFALSPDSLRAAIISDKEAGLIPLYLCAT 214

Query: 249 VGTTACGAVDPIKELAEIAKGYNLWFHIDAAYAGSACICPEFRHYLDGVESADSLSMNPH 308
           VGTT+ GAVDP+  L ++A+ Y +W HIDAAYAGSACICP+                   
Sbjct: 215 VGTTSSGAVDPVGPLCDVAEDYGIWVHIDAAYAGSACICPD------------------- 255

Query: 309 KWLLTNMDCCCLWIKRPNLLVDSLSSEAEFLKNAVSESKAIIDYKDWQIALSRRFKALKL 368
                              LV++ S+++E+LKN  ++SK ++DYKDWQ+ L+RRF+A+KL
Sbjct: 256 ------------------ALVNAFSTDSEYLKNTATDSKQVVDYKDWQVPLTRRFRAIKL 297

Query: 369 WIVIRRHGLANLMYHIRSDISLAKRFESFVRNDKRFEIVVPRKFALVCFRLKPRNGTNDG 428
           W+V+R +G+ NL  ++R  + +AK FE  +  DKRFE+VVPR F+L           +  
Sbjct: 298 WLVLRSYGVVNLRNYLRRHVEMAKHFEGLIAMDKRFEVVVPRNFSL-----------STA 346

Query: 429 RELNTQLLAAVNQSGRAFLTHGLAGG-YFIRCAIGSTLTEERHVDELWKL 477
            ELN +LL ++N SG   +TH + GG Y IR +IG  LT+ RH++  WK+
Sbjct: 347 NELNRKLLKSLNDSGLVCMTHAIVGGIYMIRFSIGQPLTDYRHIEMAWKV 396


>GSVIVT01021573001 assembled CDS
          Length = 397

 Score =  380 bits (975), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/488 (41%), Positives = 279/488 (57%), Gaps = 106/488 (21%)

Query: 9   FSPLDTKTFKDESNMVVEFIEEYYKNIEKYPVQSQVQPGFLSSKLPKTPPYYPEPLEDIL 68
            +PL+ + F+ + +M+++ + +YY++IEKYPV+SQV+PG+L   +P+  P YPEP+E IL
Sbjct: 1   MTPLNHQEFRRQGHMIIDMLADYYRDIEKYPVRSQVEPGYLRQLIPEDAPDYPEPIETIL 60

Query: 69  KDVTDTIIPGLTHWQSPNFFAYFQANVSNAGFLGEMLCSGFNVVGFNWISSPAATELESL 128
           +DV   I+PGLTHWQSPN+FAYF ++ S AG L   L   F                   
Sbjct: 61  QDVQRDIVPGLTHWQSPNYFAYFPSSGSIAGML--RLPESF------------------- 99

Query: 129 VMDWMGXXXXXXXXXXXXGTGGGVLHGSTCEAIVCTLAAARDKALQTIGWDKITKLIIYA 188
                             G GGGV+HG+TCEAI+CTL AARD+ L  +G D I +L++YA
Sbjct: 100 ---------------LFSGNGGGVIHGTTCEAILCTLVAARDQMLDRVGRDNILRLVVYA 144

Query: 189 SDQTHSTLFKGARLIGIPSSNIRNLPTSFSTGFSLSPQILSDTIDNDIKFGFYPLFLCAT 248
           SDQTH  L K A++ GI   N+R L T+    F+LSP  L   I +D + G  PLFLCAT
Sbjct: 145 SDQTHCALQKAAQVAGIHPDNVRVLQTTKLAAFALSPHSLRSAIISDKEAGMIPLFLCAT 204

Query: 249 VGTTACGAVDPIKELAEIAKGYNLWFHIDAAYAGSACICPEFRHYLDGVESADSLSMNPH 308
           VGTT+  AVDP++ L +                        FRH+++      +LS NP 
Sbjct: 205 VGTTSSTAVDPVEALCD------------------------FRHFIN------ALSTNP- 233

Query: 309 KWLLTNMDCCCLWIKRPNLLVDSLSSEAEFLKNAVSESKAIIDYKDWQIALSRRFKALKL 368
                                       E+L+N  + SK ++DYKDWQIALSRRF+A+KL
Sbjct: 234 ----------------------------EYLRNGATNSKRVVDYKDWQIALSRRFRAMKL 265

Query: 369 WIVIRRHGLANLMYHIRSDISLAKRFESFVRNDKRFEIVVPRKFALVCFRLKPR------ 422
           W+V+R +G++NL   IR  I +AK FE  +  DKRFE+VVPR F+ VCFR+ P       
Sbjct: 266 WLVLRSYGVSNLRSFIRRHIEMAKHFEQLIATDKRFEVVVPRNFSTVCFRVSPSAIPKRF 325

Query: 423 -NGTNDGR---ELNTQLLAAVNQSGRAFLTHGLAGG-YFIRCAIGSTLTEERHVDELWKL 477
              +ND      LN++LL ++N SGR F+TH + GG Y IR A+G++LTEERHV+  W++
Sbjct: 326 YQNSNDNEIVNALNSKLLESLNGSGRVFMTHAIVGGVYIIRFAVGASLTEERHVNMAWEV 385

Query: 478 IQXTAQTV 485
           IQ  A  +
Sbjct: 386 IQQYADAI 393


>GSVIVT01026378001 assembled CDS
          Length = 164

 Score =  204 bits (519), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 90/134 (67%), Positives = 111/134 (82%)

Query: 1   MDSLSTNTFSPLDTKTFKDESNMVVEFIEEYYKNIEKYPVQSQVQPGFLSSKLPKTPPYY 60
           M++LS N FSPLD ++F +ES ++V+FI +YY+N+EKYPVQSQV  G+L    P + PY 
Sbjct: 1   MNTLSLNNFSPLDPQSFLEESKLIVDFIADYYRNVEKYPVQSQVSSGYLVHHCPDSAPYS 60

Query: 61  PEPLEDILKDVTDTIIPGLTHWQSPNFFAYFQANVSNAGFLGEMLCSGFNVVGFNWISSP 120
           PEPLE ILK+V+D+IIPGLTH QSPNFF YFQAN S  GFLGEMLC+G N +GFNWI+SP
Sbjct: 61  PEPLESILKEVSDSIIPGLTHLQSPNFFGYFQANASTTGFLGEMLCTGLNAIGFNWIASP 120

Query: 121 AATELESLVMDWMG 134
           AATELES+VMDW+G
Sbjct: 121 AATELESIVMDWVG 134


>GSVIVT01000454001 assembled CDS
          Length = 210

 Score =  197 bits (502), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 93/179 (51%), Positives = 125/179 (69%), Gaps = 1/179 (0%)

Query: 309 KWLLTNMDCCCLWIKRPNLLVDSLSSEAEFLKNAVSESKAIIDYKDWQIALSRRFKALKL 368
           +WLL+ +DCCCLWIK+ + +  SLS   E+L N  +ES  ++++KDWQI + RRFKAL+L
Sbjct: 25  EWLLSYLDCCCLWIKQLSKITRSLSINPEYLNNKANESDFVVEFKDWQIGIGRRFKALRL 84

Query: 369 WIVIRRHGLANLMYHIRSDISLAKRFESFVRNDKRFEIVVPRKFALVCFRLKPRNGTNDG 428
           W+VIR +G+ANL  HIR DI +AK F+S VR+D RFEIV PR F+LVCFRL P   +  G
Sbjct: 85  WLVIRSYGVANLQSHIRFDIQMAKLFKSMVRSDPRFEIVTPRLFSLVCFRLNPWPRSATG 144

Query: 429 RELNTQLLAAVNQSGRAFLTHGLAGG-YFIRCAIGSTLTEERHVDELWKLIQXTAQTVS 486
             LN  LL  +N +G  ++ H +  G Y +RCA+GSTLTEE HV   WKLI+  A  ++
Sbjct: 145 IGLNRMLLDQINTTGSVYMNHTIVDGVYMLRCAVGSTLTEELHVVAAWKLIKEEADALT 203